- Fixed typo in vignette
- Added CITATION file and added reference to citation in vignette
- Added a
NEWS.md
file to track changes to the package. - Added link to eHDPrep's github repository in package documentation.
- Updated various documentation (functions and vignette).
- Now minimally requires and is compatible with dplyr 1.1.0 (#3, @DavisVaughan).
completeness_heatmap()
has been altered to avoid an issue of plotting over other plots. Now requires plot.new() call.
- Added function,
metavariable_variable_descendants()
, to more easily access relationships between meta-variables and their descendant variables. semantic_enrichment()
now accepts a label attribute to label meta-variables with the parameter:label_attr
.semantic_enrichment()
now accepts an ontology as a data frame edge table, as a path to an edge table in CSV format, or as atidygraph
/igraph
graph.- Added function,
edge_tbl_to_graph()
, to convert edge tables, as data frames, totidygraph
graphs. - Added data,
example_edge_table
, to demonstrateedge_tbl_to_graph()
. example_ontology
is now generated fromexample_edge_table
.metavariable_info()
now can exclude meta-variables with an information content less than a threshold from output with theIC_threshold
parameter. This will exclude non-specific meta-variables from consideration when output is passed tometavariable_agg()
(e.g. ontology's root node).