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DESCRIPTION
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Package: TARDIS
Title: TArgeted Raw Data Integration In Spectrometry
Version: 0.1.3
Authors@R:
c(person(given = "Pablo",
family = "Vangeenderhuysen",
email = "pablovangeenderhuysen@ugent.be",
role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-5492-6904")))
Description: TARDIS was created to extract targeted chromatographic
peak data from LC-MS experiments. It makes use of the 'Spectra'
package in order to be future-proof and exist within the
Rformasspectry series of packages.
License: GPL (>= 3)
Imports:
BiocParallel (>= 1.37.0),
bslib (>= 0.7.0),
dplyr (>= 1.1.4),
ggplot2 (>= 3.4.4),
jrc (>= 0.6.0),
kableExtra (>= 1.4.0),
magrittr (>= 2.0.3),
MsExperiment (>= 1.5.4),
pracma (>= 2.4.4),
RColorBrewer (>= 1.1.3),
readxl (>= 1.4.3),
shiny (>= 1.8.0),
shinybusy (>= 0.3.3),
shinyFiles (>= 0.9.3),
shinyjs (>= 2.1.0),
signal (>= 1.8.0),
Spectra (>= 1.13.4),
stringr (>= 1.5.1),
tibble (>= 3.2.1),
tidyr (>= 1.3.1),
xcms (>= 4.1.8),
ProtGenerics (>= 1.36.0),
writexl (>= 1.5.0)
Suggests:
knitr,
testthat
biocViews: Infrastructure, Software, Metabolomics, MassSpectrometry
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
VignetteBuilder: knitr