NAMESPACE

# Generated by roxygen2: do not edit by hand

export(apply_hcr_om)
export(calc_catch_seas_country)
export(calc_mean_age)
export(calc_mean_waa)
export(calc_quantiles)
export(calc_quantiles_by_group)
export(calc_standard_error_ssb)
export(calc_tac_est_vs_real)
export(calc_term_quantiles)
export(col2hex)
export(color_facet_backgrounds)
export(compare_age_comps)
export(compare_age_in_catch)
export(compare_biomass)
export(compare_move)
export(compare_tmb_data)
export(conv_vec_to_mse_df)
export(create_plot_objects)
export(create_tmb_data)
export(extract_catch_country)
export(extract_initial_values)
export(fetch_extra_mcmc)
export(files_exist)
export(fill_waa_years)
export(get_age_dat)
export(get_args)
export(get_em_outputs)
export(get_f)
export(get_likelihoods)
export(get_ref_point)
export(get_select)
export(get_wa_dfs)
export(get_yrs_mse_list)
export(hake_theme)
export(hake_violin)
export(init_agebased_model)
export(init_movement_mat)
export(load_data_om)
export(load_data_table_from_web)
export(load_mse_plot_data)
export(load_ss_extract_age_comps)
export(load_ss_model_data)
export(load_ss_parameters)
export(load_ss_sel_parameters)
export(merge_run_data)
export(modify_wage_df)
export(plotSelectivity)
export(plotUncertainty)
export(plotValues)
export(plot_bars_country)
export(plot_bars_country_season)
export(plot_catch_quota)
export(plot_catch_quota_1panel)
export(plot_em_timeseries)
export(plot_exploitation_rate)
export(plot_selectivity_scenarios)
export(plot_standard_error)
export(plot_tac_est_vs_real)
export(plot_tac_vs_hcr)
export(plot_timeseries)
export(plot_timeseries_runs)
export(plot_violins)
export(plot_violins_country)
export(pr)
export(run_mse_scenario)
export(run_mses)
export(run_om)
export(run_oms)
export(run_season_loop_om)
export(run_year_loop_om)
export(setup_blank_om_objects)
export(setup_mse_plot_objects)
export(table_perf_metrics)
export(table_timeseries)
export(update_om_data)
import(TMB)
import(dplyr, except = c(lag))
import(gfutilities, except = c(f, firstup, get_os, number_to_word))
import(ggplot2)
import(hake)
import(httr2)
import(kableExtra, except = c(group_rows))
import(knitr)
import(purrr)
import(r4ss, except = c(profile))
import(readr)
import(stats, except = c(filter))
import(stringr)
import(tibble)
import(tidyr)
import(tidyselect)
importFrom(PNWColors,pnw_palette)
importFrom(RColorBrewer,brewer.pal)
importFrom(TMB,MakeADFun)
importFrom(TMB,sdreport)
importFrom(clisymbols,symbol)
importFrom(cowplot,plot_grid)
importFrom(crayon,green)
importFrom(crayon,red)
importFrom(crayon,white)
importFrom(crayon,yellow)
importFrom(forcats,fct_relevel)
importFrom(furrr,furrr_options)
importFrom(furrr,future_imap)
importFrom(furrr,future_map2)
importFrom(ggplot2,ggtitle)
importFrom(grDevices,col2rgb)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,rgb)
importFrom(graphics,plot)
importFrom(graphics,points)
importFrom(graphics,polygon)
importFrom(grid,grid.draw)
importFrom(here,here)
importFrom(httr,HEAD)
importFrom(r4ss,SS_output)
importFrom(r4ss,SS_readdat)
importFrom(reshape2,melt)
importFrom(rlang,":=")
importFrom(rlang,sym)
importFrom(tictoc,tic)
importFrom(tictoc,toc)
importFrom(utils,read.csv)
importFrom(utils,read.table)
importFrom(utils,tail)
useDynLib(pacifichakemse, .registration = TRUE)