README.Rmd

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# Choptank database

This website contains links and information for interacting with the Choptank Hydrologic Connectivity database, which uses the [ODM2](http://www.odm2.org/) framework and is an ongoing collaboration between several lab groups at the University of Maryland and Virginia Tech. Contact [Kelly Hondula](https://github.com/khondula) for more information. 

### Access

* [connect](https://palmerlab-umd.github.io/choptank-db/connect.nb.html) through RStudio
* Or use [pgAdmin 4](https://www.pgadmin.org/) for point and click navigation using the same credentials.


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### Sites

* [List of sites in database](https://palmerlab-umd.github.io/choptank-db/current-sites.nb.html) *as of June 22, 2018*
* [Network of sites and site relationships](https://palmerlab-umd.github.io/choptank-db/sites-network.html) *as of May 25, 2018*
* [Map of survey points from March 13-15](https://palmerlab-umd.github.io/choptank-db/survey_pts.html)
* [Map of Nate's Approximate Well Locations](https://palmerlab-umd.github.io/choptank-db/ApproxWellLoc.html) 
*as of October 3, 2017*

### Samples

* [List of samples in database](https://palmerlab-umd.github.io/choptank-db/samples.html) *as of June 22, 2018*

### Methods

* [List of methods in database](https://palmerlab-umd.github.io/choptank-db/current-methods.nb.html) *as of July 5, 2018*

### Variables

* [List of variables in database](https://palmerlab-umd.github.io/choptank-db/current-variables.nb.html) *as of July 4, 2018*

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### Guides

* [Add a person](https://palmerlab-umd.github.io/choptank-db/people.nb.html)
* [Insert soil moisture data](https://palmerlab-umd.github.io/choptank-db/soil-moisture-notebook.nb.html) _Notebook format_
* [Insert soil moisture data](https://palmerlab-umd.github.io/choptank-db/soil-moisture-measurements.html)

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**Links**

* [View on Github](https://github.com/palmerlab-umd/choptank-db)
* [ODM2 Vocabulary](http://vocabulary.odm2.org/)
* [Schema diagrams](http://odm2.github.io/ODM2/schemas/ODM2_Current/diagrams/index.html)