diff --git a/experiments/Manifest.toml b/experiments/Manifest.toml index 12072d58..4ad990c6 100644 --- a/experiments/Manifest.toml +++ b/experiments/Manifest.toml @@ -338,14 +338,10 @@ uuid = "3da002f7-5984-5a60-b8a6-cbb66c0b333f" version = "0.11.4" [[deps.ColorVectorSpace]] -deps = ["ColorTypes", "FixedPointNumbers", "LinearAlgebra", "Requires", "Statistics", "TensorCore"] -git-tree-sha1 = "a1f44953f2382ebb937d60dafbe2deea4bd23249" +deps = ["ColorTypes", "FixedPointNumbers", "LinearAlgebra", "SpecialFunctions", "Statistics", "TensorCore"] +git-tree-sha1 = "600cc5508d66b78aae350f7accdb58763ac18589" uuid = "c3611d14-8923-5661-9e6a-0046d554d3a4" -version = "0.10.0" -weakdeps = ["SpecialFunctions"] - - [deps.ColorVectorSpace.extensions] - SpecialFunctionsExt = "SpecialFunctions" +version = "0.9.10" [[deps.Colors]] deps = ["ColorTypes", "FixedPointNumbers", "Reexport"] @@ -437,7 +433,7 @@ version = "0.6.3" [[deps.CounterfactualExplanations]] deps = ["CSV", "CUDA", "CategoricalArrays", "ChainRulesCore", "DataFrames", "DecisionTree", "Distributions", "EvoTrees", "Flux", "LaplaceRedux", "LazyArtifacts", "LinearAlgebra", "Logging", "MLDatasets", "MLJBase", "MLJDecisionTreeInterface", "MLJModels", "MLUtils", "MultivariateStats", "NearestNeighborModels", "PackageExtensionCompat", "Parameters", "PrecompileTools", "ProgressMeter", "Random", "Serialization", "Statistics", "StatsBase", "Tables", "UUIDs", "cuDNN"] -git-tree-sha1 = "4229e0d94c9fc6cc3489e7967fd46b4d74451c3d" +git-tree-sha1 = "88bbfd76d8d531becf02596c94fb9975545b0a96" repo-rev = "main" repo-url = "https://github.com/JuliaTrustworthyAI/CounterfactualExplanations.jl.git" uuid = "2f13d31b-18db-44c1-bc43-ebaf2cff0be0" @@ -687,9 +683,9 @@ uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" [[deps.FillArrays]] deps = ["LinearAlgebra", "Random"] -git-tree-sha1 = "fdd015769934644858b4bcc69a03bb06f4e31357" +git-tree-sha1 = "25a10f2b86118664293062705fd9c7e2eda881a2" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "1.9.0" +version = "1.9.2" weakdeps = ["PDMats", "SparseArrays", "Statistics"] [deps.FillArrays.extensions] @@ -704,10 +700,10 @@ uuid = "53c48c17-4a7d-5ca2-90c5-79b7896eea93" version = "0.8.4" [[deps.Flux]] -deps = ["Adapt", "ChainRulesCore", "Functors", "LinearAlgebra", "MLUtils", "MacroTools", "NNlib", "OneHotArrays", "Optimisers", "Preferences", "ProgressLogging", "Random", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "Zygote"] -git-tree-sha1 = "b97c3fc4f3628b8835d83789b09382961a254da4" +deps = ["Adapt", "ChainRulesCore", "Compat", "Functors", "LinearAlgebra", "MLUtils", "MacroTools", "NNlib", "OneHotArrays", "Optimisers", "Preferences", "ProgressLogging", "Random", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "Zygote"] +git-tree-sha1 = "75e3b3732929e880e7fd121e8a4e4dd5e1bfeaee" uuid = "587475ba-b771-5e3f-ad9e-33799f191a9c" -version = "0.14.6" +version = "0.14.7" [deps.Flux.extensions] FluxAMDGPUExt = "AMDGPU" @@ -803,9 +799,9 @@ version = "0.72.8+0" [[deps.GZip]] deps = ["Libdl", "Zlib_jll"] -git-tree-sha1 = "6388a2d8e409ce23de7d03a7c73d83c5753b3eb2" +git-tree-sha1 = "0085ccd5ec327c077ec5b91a5f937b759810ba62" uuid = "92fee26a-97fe-5a0c-ad85-20a5f3185b63" -version = "0.6.1" +version = "0.6.2" [[deps.GeoInterface]] deps = ["Extents"] @@ -930,9 +926,9 @@ version = "0.6.11" [[deps.ImageBase]] deps = ["ImageCore", "Reexport"] -git-tree-sha1 = "eb49b82c172811fd2c86759fa0553a2221feb909" +git-tree-sha1 = "b51bb8cae22c66d0f6357e3bcb6363145ef20835" uuid = "c817782e-172a-44cc-b673-b171935fbb9e" -version = "0.1.7" +version = "0.1.5" [[deps.ImageBinarization]] deps = ["HistogramThresholding", "ImageCore", "LinearAlgebra", "Polynomials", "Reexport", "Statistics"] @@ -947,10 +943,10 @@ uuid = "f332f351-ec65-5f6a-b3d1-319c6670881a" version = "0.3.12" [[deps.ImageCore]] -deps = ["AbstractFFTs", "ColorVectorSpace", "Colors", "FixedPointNumbers", "MappedArrays", "MosaicViews", "OffsetArrays", "PaddedViews", "PrecompileTools", "Reexport"] -git-tree-sha1 = "fc5d1d3443a124fde6e92d0260cd9e064eba69f8" +deps = ["AbstractFFTs", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Graphics", "MappedArrays", "MosaicViews", "OffsetArrays", "PaddedViews", "Reexport"] +git-tree-sha1 = "acf614720ef026d38400b3817614c45882d75500" uuid = "a09fc81d-aa75-5fe9-8630-4744c3626534" -version = "0.10.1" +version = "0.9.4" [[deps.ImageCorners]] deps = ["ImageCore", "ImageFiltering", "PrecompileTools", "StaticArrays", "StatsBase"] @@ -966,15 +962,15 @@ version = "0.2.17" [[deps.ImageFiltering]] deps = ["CatIndices", "ComputationalResources", "DataStructures", "FFTViews", "FFTW", "ImageBase", "ImageCore", "LinearAlgebra", "OffsetArrays", "PrecompileTools", "Reexport", "SparseArrays", "StaticArrays", "Statistics", "TiledIteration"] -git-tree-sha1 = "432ae2b430a18c58eb7eca9ef8d0f2db90bc749c" +git-tree-sha1 = "3447781d4c80dbe6d71d239f7cfb1f8049d4c84f" uuid = "6a3955dd-da59-5b1f-98d4-e7296123deb5" -version = "0.7.8" +version = "0.7.6" [[deps.ImageIO]] -deps = ["FileIO", "IndirectArrays", "JpegTurbo", "LazyModules", "Netpbm", "OpenEXR", "PNGFiles", "QOI", "Sixel", "TiffImages", "UUIDs"] -git-tree-sha1 = "bca20b2f5d00c4fbc192c3212da8fa79f4688009" +deps = ["FileIO", "Netpbm", "PNGFiles"] +git-tree-sha1 = "0d6d09c28d67611c68e25af0c2df7269c82b73c7" uuid = "82e4d734-157c-48bb-816b-45c225c6df19" -version = "0.6.7" +version = "0.4.1" [[deps.ImageMagick]] deps = ["FileIO", "ImageCore", "ImageMagick_jll", "InteractiveUtils"] @@ -1008,9 +1004,9 @@ version = "0.3.7" [[deps.ImageSegmentation]] deps = ["Clustering", "DataStructures", "Distances", "Graphs", "ImageCore", "ImageFiltering", "ImageMorphology", "LinearAlgebra", "MetaGraphs", "RegionTrees", "SimpleWeightedGraphs", "StaticArrays", "Statistics"] -git-tree-sha1 = "3ff0ca203501c3eedde3c6fa7fd76b703c336b5f" +git-tree-sha1 = "44664eea5408828c03e5addb84fa4f916132fc26" uuid = "80713f31-8817-5129-9cf8-209ff8fb23e1" -version = "1.8.2" +version = "1.8.1" [[deps.ImageShow]] deps = ["Base64", "ColorSchemes", "FileIO", "ImageBase", "ImageCore", "OffsetArrays", "StackViews"] @@ -1030,12 +1026,6 @@ git-tree-sha1 = "d438268ed7a665f8322572be0dabda83634d5f45" uuid = "916415d5-f1e6-5110-898d-aaa5f9f070e0" version = "0.26.0" -[[deps.Imath_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "3d09a9f60edf77f8a4d99f9e015e8fbf9989605d" -uuid = "905a6f67-0a94-5f89-b386-d35d92009cd1" -version = "3.1.7+0" - [[deps.IndirectArrays]] git-tree-sha1 = "012e604e1c7458645cb8b436f8fba789a51b257f" uuid = "9b13fd28-a010-5f03-acff-a1bbcff69959" @@ -1157,17 +1147,11 @@ git-tree-sha1 = "1b4a8ae085fa69edf41b66bd6a18bc7cf37465c2" uuid = "48c56d24-211d-4463-bbc0-7a701b291131" version = "0.1.3" -[[deps.JpegTurbo]] -deps = ["CEnum", "FileIO", "ImageCore", "JpegTurbo_jll", "TOML"] -git-tree-sha1 = "d65930fa2bc96b07d7691c652d701dcbe7d9cf0b" -uuid = "b835a17e-a41a-41e7-81f0-2f016b05efe0" -version = "0.1.4" - [[deps.JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "6f2675ef130a300a112286de91973805fcc5ffbc" +git-tree-sha1 = "60b1194df0a3298f460063de985eae7b01bc011a" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" -version = "2.1.91+0" +version = "3.0.1+0" [[deps.JuliaNVTXCallbacks_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1183,9 +1167,9 @@ version = "0.2.4" [[deps.KernelAbstractions]] deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "Requires", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "b0737cbbe1c8da6f1139d1c23e35e7cea129c0af" +git-tree-sha1 = "81de11f7b02465435aab0ed7e935965bfcb3072b" uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" -version = "0.9.13" +version = "0.9.14" [deps.KernelAbstractions.extensions] EnzymeExt = "EnzymeCore" @@ -1741,18 +1725,6 @@ deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"] uuid = "4536629a-c528-5b80-bd46-f80d51c5b363" version = "0.3.21+4" -[[deps.OpenEXR]] -deps = ["Colors", "FileIO", "OpenEXR_jll"] -git-tree-sha1 = "327f53360fdb54df7ecd01e96ef1983536d1e633" -uuid = "52e1d378-f018-4a11-a4be-720524705ac7" -version = "0.3.2" - -[[deps.OpenEXR_jll]] -deps = ["Artifacts", "Imath_jll", "JLLWrappers", "Libdl", "Zlib_jll"] -git-tree-sha1 = "a4ca623df1ae99d09bc9868b008262d0c0ac1e4f" -uuid = "18a262bb-aa17-5467-a713-aee519bc75cb" -version = "3.1.4+0" - [[deps.OpenLibm_jll]] deps = ["Artifacts", "Libdl"] uuid = "05823500-19ac-5b8b-9628-191a04bc5112" @@ -1818,9 +1790,9 @@ version = "0.11.30" [[deps.PNGFiles]] deps = ["Base64", "CEnum", "ImageCore", "IndirectArrays", "OffsetArrays", "libpng_jll"] -git-tree-sha1 = "eed372b0fa15624273a9cdb188b1b88476e6a233" +git-tree-sha1 = "f809158b27eba0c18c269cf2a2be6ed751d3e81d" uuid = "f57f5aa1-a3ce-4bc8-8ab9-96f992907883" -version = "0.4.2" +version = "0.3.17" [[deps.PackageExtensionCompat]] git-tree-sha1 = "fb28e33b8a95c4cee25ce296c817d89cc2e53518" @@ -1996,12 +1968,6 @@ git-tree-sha1 = "00099623ffee15972c16111bcf84c58a0051257c" uuid = "92933f4c-e287-5a05-a399-4b506db050ca" version = "1.9.0" -[[deps.QOI]] -deps = ["ColorTypes", "FileIO", "FixedPointNumbers"] -git-tree-sha1 = "18e8f4d1426e965c7b532ddd260599e1510d26ce" -uuid = "4b34888f-f399-49d4-9bb3-47ed5cae4e65" -version = "1.0.0" - [[deps.Qt5Base_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Fontconfig_jll", "Glib_jll", "JLLWrappers", "Libdl", "Libglvnd_jll", "OpenSSL_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libxcb_jll", "Xorg_xcb_util_image_jll", "Xorg_xcb_util_keysyms_jll", "Xorg_xcb_util_renderutil_jll", "Xorg_xcb_util_wm_jll", "Zlib_jll", "xkbcommon_jll"] git-tree-sha1 = "0c03844e2231e12fda4d0086fd7cbe4098ee8dc5" @@ -2199,12 +2165,6 @@ git-tree-sha1 = "4b33e0e081a825dbfaf314decf58fa47e53d6acb" uuid = "47aef6b3-ad0c-573a-a1e2-d07658019622" version = "1.4.0" -[[deps.Sixel]] -deps = ["Dates", "FileIO", "ImageCore", "IndirectArrays", "OffsetArrays", "REPL", "libsixel_jll"] -git-tree-sha1 = "2da10356e31327c7096832eb9cd86307a50b1eb6" -uuid = "45858cf5-a6b0-47a3-bbea-62219f50df47" -version = "0.1.3" - [[deps.Sockets]] uuid = "6462fe0b-24de-5631-8697-dd941f90decc" @@ -2404,12 +2364,6 @@ git-tree-sha1 = "eda08f7e9818eb53661b3deb74e3159460dfbc27" uuid = "8290d209-cae3-49c0-8002-c8c24d57dab5" version = "0.5.2" -[[deps.TiffImages]] -deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "Mmap", "OffsetArrays", "PkgVersion", "ProgressMeter", "UUIDs"] -git-tree-sha1 = "34cc045dd0aaa59b8bbe86c644679bc57f1d5bd0" -uuid = "731e570b-9d59-4bfa-96dc-6df516fadf69" -version = "0.6.8" - [[deps.TiledIteration]] deps = ["OffsetArrays", "StaticArrayInterface"] git-tree-sha1 = "1176cc31e867217b06928e2f140c90bd1bc88283" @@ -2576,9 +2530,9 @@ version = "1.6.1" [[deps.XML2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Zlib_jll"] -git-tree-sha1 = "da69178aacc095066bad1f69d2f59a60a1dd8ad1" +git-tree-sha1 = "801cbe47eae69adc50f36c3caec4758d2650741b" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.12.0+0" +version = "2.12.2+0" [[deps.XSLT_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"] @@ -2793,16 +2747,10 @@ uuid = "f638f0a6-7fb0-5443-88ba-1cc74229b280" version = "2.0.2+0" [[deps.libpng_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"] -git-tree-sha1 = "94d180a6d2b5e55e447e2d27a29ed04fe79eb30c" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Zlib_jll"] +git-tree-sha1 = "93284c28274d9e75218a416c65ec49d0e0fcdf3d" uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f" -version = "1.6.38+0" - -[[deps.libsixel_jll]] -deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Pkg", "libpng_jll"] -git-tree-sha1 = "d4f63314c8aa1e48cd22aa0c17ed76cd1ae48c3c" -uuid = "075b6546-f08a-558a-be8f-8157d0f608a5" -version = "1.10.3+0" +version = "1.6.40+0" [[deps.libvorbis_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"]