query_haplor_and_get_hg38_pos.ipynb

{
 "cells": [
  {
   "cell_type": "code",
   "execution_count": 1,
   "metadata": {},
   "outputs": [],
   "source": [
    "library(haploR)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 2,
   "metadata": {},
   "outputs": [],
   "source": [
    "snp_data <- read.table(\"/projects/pfenninggroup/machineLearningForComputationalBiology/eramamur_stuff/ad_variants_processing/snigdha_snp_list_unique.txt\",\n",
    "                       sep='\\t',\n",
    "                       header=TRUE)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 3,
   "metadata": {},
   "outputs": [],
   "source": [
    "rsids <- as.vector(snp_data[[\"LD_RSID\"]])"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 6,
   "metadata": {},
   "outputs": [
    {
     "data": {
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       "\\item 'rs111710395'\n",
       "\\item 'rs521539'\n",
       "\\item 'rs3129751'\n",
       "\\item 'rs3104413'\n",
       "\\item 'rs3129753'\n",
       "\\item 'rs6605556'\n",
       "\\item 'rs6931277'\n",
       "\\item 'rs6941972'\n",
       "\\item 'rs510205'\n",
       "\\item 'rs114879339'\n",
       "\\item 'rs9271509'\n",
       "\\item 'rs9271594'\n",
       "\\item 'rs9271608'\n",
       "\\item 'rs1281947'\n",
       "\\item 'rs145342536'\n",
       "\\item 'rs187370608'\n",
       "\\item 'rs75932628'\n",
       "\\item 'rs1931833'\n",
       "\\item 'rs7740963'\n",
       "\\item 'rs9381562'\n",
       "\\item 'rs9473117'\n",
       "\\item 'rs9381563'\n",
       "\\item 'rs9369693'\n",
       "\\item 'rs34245545'\n",
       "\\item 'rs9369695'\n",
       "\\item 'rs4715018'\n",
       "\\item 'rs60924431'\n",
       "\\item 'rs1931837'\n",
       "\\item 'rs9381564'\n",
       "\\item 'rs1004173'\n",
       "\\item 'rs4715019'\n",
       "\\item 'rs9367279'\n",
       "\\item 'rs9473119'\n",
       "\\item 'rs9296558'\n",
       "\\item 'rs9296559'\n",
       "\\item 'rs9349407'\n",
       "\\item 'rs4711878'\n",
       "\\item 'rs6931478'\n",
       "\\item 'rs9349409'\n",
       "\\item 'rs142277866'\n",
       "\\item 'rs9395262'\n",
       "\\item 'rs7738044'\n",
       "\\item 'rs12214064'\n",
       "\\item 'rs9473122'\n",
       "\\item 'rs9473123'\n",
       "\\item 'rs9463335'\n",
       "\\item 'rs13211285'\n",
       "\\item 'rs4711880'\n",
       "\\item 'rs1872505'\n",
       "\\item 'rs9473126'\n",
       "\\item 'rs4715025'\n",
       "\\item 'rs7749271'\n",
       "\\item 'rs7767350'\n",
       "\\item 'rs67769713'\n",
       "\\item 'rs10948363'\n",
       "\\item 'rs9296561'\n",
       "\\item 'rs6913202'\n",
       "\\item 'rs13201473'\n",
       "\\item 'rs7749167'\n",
       "\\item 'rs9296564'\n",
       "\\item 'rs7754282'\n",
       "\\item 'rs6904764'\n",
       "\\item 'rs9473128'\n",
       "\\item 'rs9349413'\n",
       "\\item 'rs74607583'\n",
       "\\item 'rs7774667'\n",
       "\\item 'rs2151974'\n",
       "\\item 'rs2151975'\n",
       "\\item 'rs2171089'\n",
       "\\item 'rs9367284'\n",
       "\\item 'rs6931011'\n",
       "\\item 'rs9381575'\n",
       "\\item 'rs34744382'\n",
       "\\item 'rs12193051'\n",
       "\\item 'rs9395279'\n",
       "\\item 'rs9357546'\n",
       "\\item 'rs67325630'\n",
       "\\item 'rs9395283'\n",
       "\\item 'rs9349415'\n",
       "\\item 'rs9349416'\n",
       "\\item 'rs9369716'\n",
       "\\item 'rs13193054'\n",
       "\\item 'rs9296567'\n",
       "\\item 'rs9395285'\n",
       "\\item 'rs9369717'\n",
       "\\item 'rs1485780'\n",
       "\\item 'rs9381578'\n",
       "\\item 'rs9381579'\n",
       "\\item 'rs10456570'\n",
       "\\item 'rs6903331'\n",
       "\\item 'rs2396825'\n",
       "\\item 'rs9395286'\n",
       "\\item 'rs13212790'\n",
       "\\item 'rs9349417'\n",
       "\\item 'rs9381581'\n",
       "\\item 'rs12195738'\n",
       "\\item 'rs9463342'\n",
       "\\item 'rs10948367'\n",
       "\\item 'rs1948047'\n",
       "\\item 'rs143419962'\n",
       "\\item 'rs34945135'\n",
       "\\item 'rs2171086'\n",
       "\\item 'rs7754971'\n",
       "\\item 'rs1476679'\n",
       "\\item 'rs34919929'\n",
       "\\item 'rs60738304'\n",
       "\\item 'rs6971558'\n",
       "\\item 'rs12539172'\n",
       "\\item 'rs7791765'\n",
       "\\item 'rs10808026'\n",
       "\\item 'rs56402156'\n",
       "\\item 'rs12703526'\n",
       "\\item 'rs11762262'\n",
       "\\item 'rs7810606'\n",
       "\\item 'rs11763230'\n",
       "\\item 'rs11767557'\n",
       "\\item 'rs75045569'\n",
       "\\item 'rs114360492'\n",
       "\\item 'rs7384878'\n",
       "\\item 'rs2405442'\n",
       "\\item 'rs1859788'\n",
       "\\item 'rs2906657'\n",
       "\\item 'rs34995835'\n",
       "\\item 'rs28834970'\n",
       "\\item 'rs57735330'\n",
       "\\item 'rs6987305'\n",
       "\\item 'rs2322599'\n",
       "\\item 'rs73223431'\n",
       "\\item 'rs17057043'\n",
       "\\item 'rs755951'\n",
       "\\item 'rs112754919'\n",
       "\\item 'rs17057051'\n",
       "\\item 'rs7013346'\n",
       "\\item 'rs17447007'\n",
       "\\item 'rs12679874'\n",
       "\\item 'rs6557994'\n",
       "\\item 'rs2279590'\n",
       "\\item 'rs7982'\n",
       "\\item 'rs7982'\n",
       "\\item 'rs11136000'\n",
       "\\item 'rs4236673'\n",
       "\\item 'rs11787077'\n",
       "\\item 'rs1532276'\n",
       "\\item 'rs1532277'\n",
       "\\item 'rs1532278'\n",
       "\\item 'rs9331896'\n",
       "\\item 'rs2070926'\n",
       "\\item 'rs867230'\n",
       "\\end{enumerate*}\n"
      ],
      "text/markdown": [
       "1. 'rs34388456'\n",
       "2. 'rs11257227'\n",
       "3. 'rs74347557'\n",
       "4. 'rs77892763'\n",
       "5. 'rs11257238'\n",
       "6. 'rs2011704'\n",
       "7. 'rs7912495'\n",
       "8. 'rs11257240'\n",
       "9. 'rs7920721'\n",
       "10. 'rs113111379'\n",
       "11. 'rs7094380'\n",
       "12. 'rs80256323'\n",
       "13. 'rs11218343'\n",
       "14. 'rs3781831'\n",
       "15. 'rs3740688'\n",
       "16. 'rs1441586'\n",
       "17. 'rs2583476'\n",
       "18. 'rs2847663'\n",
       "19. 'rs2847664'\n",
       "20. 'rs556917'\n",
       "21. 'rs2847666'\n",
       "22. 'rs2847667'\n",
       "23. 'rs502581'\n",
       "24. 'rs2583471'\n",
       "25. 'rs2070970'\n",
       "26. 'rs2847668'\n",
       "27. 'rs2847655'\n",
       "28. 'rs502419'\n",
       "29. 'rs2855017'\n",
       "30. 'rs17528859'\n",
       "31. 'rs574704'\n",
       "32. 'rs580817'\n",
       "33. 'rs580064'\n",
       "34. 'rs521952'\n",
       "35. 'rs516478'\n",
       "36. 'rs487997'\n",
       "37. 'rs1813217'\n",
       "38. 'rs1786137'\n",
       "39. 'rs143391047'\n",
       "40. 'rs143028487'\n",
       "41. 'rs34901701'\n",
       "42. 'rs512495'\n",
       "43. 'rs555635'\n",
       "44. 'rs11230147'\n",
       "45. 'rs514266'\n",
       "46. 'rs4939311'\n",
       "47. 'rs563803'\n",
       "48. 'rs540170'\n",
       "49. 'rs574695'\n",
       "50. 'rs574798'\n",
       "51. 'rs581133'\n",
       "52. 'rs1303615'\n",
       "53. 'rs1125357'\n",
       "54. 'rs564912'\n",
       "55. 'rs1303621'\n",
       "56. 'rs11230153'\n",
       "57. 'rs483629'\n",
       "58. 'rs4939312'\n",
       "59. 'rs4939314'\n",
       "60. 'rs61901691'\n",
       "61. 'rs525794'\n",
       "62. 'rs55847558'\n",
       "63. 'rs11230155'\n",
       "64. 'rs504272'\n",
       "65. 'rs2165525'\n",
       "66. 'rs7124974'\n",
       "67. 'rs510518'\n",
       "68. 'rs534273'\n",
       "69. 'rs493692'\n",
       "70. 'rs1863472'\n",
       "71. 'rs569046'\n",
       "72. 'rs476722'\n",
       "73. 'rs595481'\n",
       "74. 'rs583296'\n",
       "75. 'rs558375'\n",
       "76. 'rs1316005'\n",
       "77. 'rs1315491'\n",
       "78. 'rs617916'\n",
       "79. 'rs606588'\n",
       "80. 'rs688030'\n",
       "81. 'rs138369826'\n",
       "82. 'rs35408863'\n",
       "83. 'rs200623768'\n",
       "84. 'rs684961'\n",
       "85. 'rs11230160'\n",
       "86. 'rs11230161'\n",
       "87. 'rs614104'\n",
       "88. 'rs9667329'\n",
       "89. 'rs11230165'\n",
       "90. 'rs12226022'\n",
       "91. 'rs10897009'\n",
       "92. 'rs983392'\n",
       "93. 'rs652354'\n",
       "94. 'rs11600716'\n",
       "95. 'rs920573'\n",
       "96. 'rs107903'\n",
       "97. 'rs17529983'\n",
       "98. 'rs602396'\n",
       "99. 'rs11605427'\n",
       "100. 'rs200025446'\n",
       "101. 'rs199902507'\n",
       "102. 'rs7926954'\n",
       "103. 'rs56189574'\n",
       "104. 'rs617135'\n",
       "105. 'rs7933202'\n",
       "106. 'rs667897'\n",
       "107. 'rs610932'\n",
       "108. 'rs7232'\n",
       "109. 'rs634475'\n",
       "110. 'rs662196'\n",
       "111. 'rs7935829'\n",
       "112. 'rs2278867'\n",
       "113. 'rs72918674'\n",
       "114. 'rs7946992'\n",
       "115. 'rs631853'\n",
       "116. 'rs624663'\n",
       "117. 'rs12453'\n",
       "118. 'rs583791'\n",
       "119. 'rs17602572'\n",
       "120. 'rs632185'\n",
       "121. 'rs1820430'\n",
       "122. 'rs1834557'\n",
       "123. 'rs56201148'\n",
       "124. 'rs636147'\n",
       "125. 'rs1834549'\n",
       "126. 'rs2081545'\n",
       "127. 'rs35044136'\n",
       "128. 'rs1834550'\n",
       "129. 'rs1834551'\n",
       "130. 'rs10897011'\n",
       "131. 'rs11230180'\n",
       "132. 'rs7926729'\n",
       "133. 'rs7926344'\n",
       "134. 'rs7926354'\n",
       "135. 'rs7116190'\n",
       "136. 'rs11230183'\n",
       "137. 'rs11230184'\n",
       "138. 'rs2123314'\n",
       "139. 'rs7933805'\n",
       "140. 'rs28628869'\n",
       "141. 'rs11230187'\n",
       "142. 'rs144406103'\n",
       "143. 'rs184909761'\n",
       "144. 'rs7939882'\n",
       "145. 'rs7929589'\n",
       "146. 'rs7928895'\n",
       "147. 'rs7932740'\n",
       "148. 'rs764859'\n",
       "149. 'rs11230194'\n",
       "150. 'rs1426253'\n",
       "151. 'rs4939320'\n",
       "152. 'rs11603507'\n",
       "153. 'rs56273223'\n",
       "154. 'rs1820428'\n",
       "155. 'rs4492839'\n",
       "156. 'rs56357056'\n",
       "157. 'rs2081547'\n",
       "158. 'rs11826180'\n",
       "159. 'rs1349667'\n",
       "160. 'rs201931677'\n",
       "161. 'rs11601689'\n",
       "162. 'rs610352'\n",
       "163. 'rs11230201'\n",
       "164. 'rs2015475'\n",
       "165. 'rs7936120'\n",
       "166. 'rs1426250'\n",
       "167. 'rs718376'\n",
       "168. 'rs611267'\n",
       "169. 'rs72920867'\n",
       "170. 'rs1019671'\n",
       "171. 'rs611418'\n",
       "172. 'rs144752623'\n",
       "173. 'rs603648'\n",
       "174. 'rs600064'\n",
       "175. 'rs654415'\n",
       "176. 'rs655231'\n",
       "177. 'rs3132886'\n",
       "178. 'rs2509801'\n",
       "179. 'rs636317'\n",
       "180. 'rs636341'\n",
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       "182. 'rs1562990'\n",
       "183. 'rs7121656'\n",
       "184. 'rs6591559'\n",
       "185. 'rs4938931'\n",
       "186. 'rs7108663'\n",
       "187. 'rs1530914'\n",
       "188. 'rs78057299'\n",
       "189. 'rs1026255'\n",
       "190. 'rs1026254'\n",
       "191. 'rs1026253'\n",
       "192. 'rs1026252'\n",
       "193. 'rs7128450'\n",
       "194. 'rs10736700'\n",
       "195. 'rs10736701'\n",
       "196. 'rs7930318'\n",
       "197. 'rs4938932'\n",
       "198. 'rs4938933'\n",
       "199. 'rs2162254'\n",
       "200. 'rs7107627'\n",
       "201. ⋯\n",
       "202. 'rs9271151'\n",
       "203. 'rs9271153'\n",
       "204. 'rs9271156'\n",
       "205. 'rs9271162'\n",
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       "214. 'rs9271174'\n",
       "215. 'rs9271178'\n",
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       "220. 'rs9271189'\n",
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       "228. 'rs112485576'\n",
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       "230. 'rs9271202'\n",
       "231. 'rs9271205'\n",
       "232. 'rs9271213'\n",
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       "310. 'rs6913202'\n",
       "311. 'rs13201473'\n",
       "312. 'rs7749167'\n",
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       "314. 'rs7754282'\n",
       "315. 'rs6904764'\n",
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       "318. 'rs74607583'\n",
       "319. 'rs7774667'\n",
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       "323. 'rs9367284'\n",
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       "326. 'rs34744382'\n",
       "327. 'rs12193051'\n",
       "328. 'rs9395279'\n",
       "329. 'rs9357546'\n",
       "330. 'rs67325630'\n",
       "331. 'rs9395283'\n",
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       "334. 'rs9369716'\n",
       "335. 'rs13193054'\n",
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       "339. 'rs1485780'\n",
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       "342. 'rs10456570'\n",
       "343. 'rs6903331'\n",
       "344. 'rs2396825'\n",
       "345. 'rs9395286'\n",
       "346. 'rs13212790'\n",
       "347. 'rs9349417'\n",
       "348. 'rs9381581'\n",
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       "351. 'rs10948367'\n",
       "352. 'rs1948047'\n",
       "353. 'rs143419962'\n",
       "354. 'rs34945135'\n",
       "355. 'rs2171086'\n",
       "356. 'rs7754971'\n",
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       "358. 'rs34919929'\n",
       "359. 'rs60738304'\n",
       "360. 'rs6971558'\n",
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       "364. 'rs56402156'\n",
       "365. 'rs12703526'\n",
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       "367. 'rs7810606'\n",
       "368. 'rs11763230'\n",
       "369. 'rs11767557'\n",
       "370. 'rs75045569'\n",
       "371. 'rs114360492'\n",
       "372. 'rs7384878'\n",
       "373. 'rs2405442'\n",
       "374. 'rs1859788'\n",
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       "376. 'rs34995835'\n",
       "377. 'rs28834970'\n",
       "378. 'rs57735330'\n",
       "379. 'rs6987305'\n",
       "380. 'rs2322599'\n",
       "381. 'rs73223431'\n",
       "382. 'rs17057043'\n",
       "383. 'rs755951'\n",
       "384. 'rs112754919'\n",
       "385. 'rs17057051'\n",
       "386. 'rs7013346'\n",
       "387. 'rs17447007'\n",
       "388. 'rs12679874'\n",
       "389. 'rs6557994'\n",
       "390. 'rs2279590'\n",
       "391. 'rs7982'\n",
       "392. 'rs7982'\n",
       "393. 'rs11136000'\n",
       "394. 'rs4236673'\n",
       "395. 'rs11787077'\n",
       "396. 'rs1532276'\n",
       "397. 'rs1532277'\n",
       "398. 'rs1532278'\n",
       "399. 'rs9331896'\n",
       "400. 'rs2070926'\n",
       "401. 'rs867230'\n",
       "\n",
       "\n"
      ],
      "text/plain": [
       "   [1] \"rs34388456\"  \"rs11257227\"  \"rs74347557\"  \"rs77892763\"  \"rs11257238\" \n",
       "   [6] \"rs2011704\"   \"rs7912495\"   \"rs11257240\"  \"rs7920721\"   \"rs113111379\"\n",
       "  [11] \"rs7094380\"   \"rs80256323\"  \"rs11218343\"  \"rs3781831\"   \"rs3740688\"  \n",
       "  [16] \"rs1441586\"   \"rs2583476\"   \"rs2847663\"   \"rs2847664\"   \"rs556917\"   \n",
       "  [21] \"rs2847666\"   \"rs2847667\"   \"rs502581\"    \"rs2583471\"   \"rs2070970\"  \n",
       "  [26] \"rs2847668\"   \"rs2847655\"   \"rs502419\"    \"rs2855017\"   \"rs17528859\" \n",
       "  [31] \"rs574704\"    \"rs580817\"    \"rs580064\"    \"rs521952\"    \"rs516478\"   \n",
       "  [36] \"rs487997\"    \"rs1813217\"   \"rs1786137\"   \"rs143391047\" \"rs143028487\"\n",
       "  [41] \"rs34901701\"  \"rs512495\"    \"rs555635\"    \"rs11230147\"  \"rs514266\"   \n",
       "  [46] \"rs4939311\"   \"rs563803\"    \"rs540170\"    \"rs574695\"    \"rs574798\"   \n",
       "  [51] \"rs581133\"    \"rs1303615\"   \"rs1125357\"   \"rs564912\"    \"rs1303621\"  \n",
       "  [56] \"rs11230153\"  \"rs483629\"    \"rs4939312\"   \"rs4939314\"   \"rs61901691\" \n",
       "  [61] \"rs525794\"    \"rs55847558\"  \"rs11230155\"  \"rs504272\"    \"rs2165525\"  \n",
       "  [66] \"rs7124974\"   \"rs510518\"    \"rs534273\"    \"rs493692\"    \"rs1863472\"  \n",
       "  [71] \"rs569046\"    \"rs476722\"    \"rs595481\"    \"rs583296\"    \"rs558375\"   \n",
       "  [76] \"rs1316005\"   \"rs1315491\"   \"rs617916\"    \"rs606588\"    \"rs688030\"   \n",
       "  [81] \"rs138369826\" \"rs35408863\"  \"rs200623768\" \"rs684961\"    \"rs11230160\" \n",
       "  [86] \"rs11230161\"  \"rs614104\"    \"rs9667329\"   \"rs11230165\"  \"rs12226022\" \n",
       "  [91] \"rs10897009\"  \"rs983392\"    \"rs652354\"    \"rs11600716\"  \"rs920573\"   \n",
       "  [96] \"rs107903\"    \"rs17529983\"  \"rs602396\"    \"rs11605427\"  \"rs200025446\"\n",
       " [101] \"rs199902507\" \"rs7926954\"   \"rs56189574\"  \"rs617135\"    \"rs7933202\"  \n",
       " [106] \"rs667897\"    \"rs610932\"    \"rs7232\"      \"rs634475\"    \"rs662196\"   \n",
       " [111] \"rs7935829\"   \"rs2278867\"   \"rs72918674\"  \"rs7946992\"   \"rs631853\"   \n",
       " [116] \"rs624663\"    \"rs12453\"     \"rs583791\"    \"rs17602572\"  \"rs632185\"   \n",
       " [121] \"rs1820430\"   \"rs1834557\"   \"rs56201148\"  \"rs636147\"    \"rs1834549\"  \n",
       " [126] \"rs2081545\"   \"rs35044136\"  \"rs1834550\"   \"rs1834551\"   \"rs10897011\" \n",
       " [131] \"rs11230180\"  \"rs7926729\"   \"rs7926344\"   \"rs7926354\"   \"rs7116190\"  \n",
       " [136] \"rs11230183\"  \"rs11230184\"  \"rs2123314\"   \"rs7933805\"   \"rs28628869\" \n",
       " [141] \"rs11230187\"  \"rs144406103\" \"rs184909761\" \"rs7939882\"   \"rs7929589\"  \n",
       " [146] \"rs7928895\"   \"rs7932740\"   \"rs764859\"    \"rs11230194\"  \"rs1426253\"  \n",
       " [151] \"rs4939320\"   \"rs11603507\"  \"rs56273223\"  \"rs1820428\"   \"rs4492839\"  \n",
       " [156] \"rs56357056\"  \"rs2081547\"   \"rs11826180\"  \"rs1349667\"   \"rs201931677\"\n",
       " [161] \"rs11601689\"  \"rs610352\"    \"rs11230201\"  \"rs2015475\"   \"rs7936120\"  \n",
       " [166] \"rs1426250\"   \"rs718376\"    \"rs611267\"    \"rs72920867\"  \"rs1019671\"  \n",
       " [171] \"rs611418\"    \"rs144752623\" \"rs603648\"    \"rs600064\"    \"rs654415\"   \n",
       " [176] \"rs655231\"    \"rs3132886\"   \"rs2509801\"   \"rs636317\"    \"rs636341\"   \n",
       " [181] \"rs672399\"    \"rs1562990\"   \"rs7121656\"   \"rs6591559\"   \"rs4938931\"  \n",
       " [186] \"rs7108663\"   \"rs1530914\"   \"rs78057299\"  \"rs1026255\"   \"rs1026254\"  \n",
       " [191] \"rs1026253\"   \"rs1026252\"   \"rs7128450\"   \"rs10736700\"  \"rs10736701\" \n",
       " [196] \"rs7930318\"   \"rs4938932\"   \"rs4938933\"   \"rs2162254\"   \"rs7107627\"  \n",
       " [201] \"rs12756718\"  \"rs11265562\"  \"rs11265563\"  \"rs4575098\"   \"rs11585858\" \n",
       " [206] \"rs68172244\"  \"rs673751\"    \"rs67911082\"  \"rs67911082\"  \"rs639012\"   \n",
       " [211] \"rs606505\"    \"rs587038\"    \"rs645299\"    \"rs2508696\"   \"rs602222\"   \n",
       " [216] \"rs636355\"    \"rs200189296\" \"rs676733\"    \"rs609903\"    \"rs682928\"   \n",
       " [221] \"rs71040206\"  \"rs561646\"    \"rs2508379\"   \"rs200041034\" \"rs1973630\"  \n",
       " [226] \"rs2508691\"   \"rs677909\"    \"rs659863\"    \"rs677869\"    \"rs694011\"   \n",
       " [231] \"rs669813\"    \"rs493254\"    \"rs10546552\"  \"rs867611\"    \"rs536841\"   \n",
       " [236] \"rs541458\"    \"rs535590\"    \"rs683912\"    \"rs78945682\"  \"rs565719\"   \n",
       " [241] \"rs480781\"    \"rs631639\"    \"rs561655\"    \"rs526904\"    \"rs566975\"   \n",
       " [246] \"rs497816\"    \"rs586274\"    \"rs1237999\"   \"rs543293\"    \"rs659023\"   \n",
       " [251] \"rs59097112\"  \"rs474479\"    \"rs567075\"    \"rs573167\"    \"rs471470\"   \n",
       " [256] \"rs472486\"    \"rs519961\"    \"rs144587195\" \"rs7110631\"   \"rs7941541\"  \n",
       " [261] \"rs10792832\"  \"rs3851179\"   \"rs4844600\"   \"rs4844600\"   \"rs12037841\" \n",
       " [266] \"rs4266886\"   \"rs4562624\"   \"rs6656401\"   \"rs6661489\"   \"rs7515905\"  \n",
       " [271] \"rs1752684\"   \"rs679515\"    \"rs3818361\"   \"rs6701713\"   \"rs2093761\"  \n",
       " [276] \"rs2093760\"   \"rs2296160\"   \"rs2296160\"   \"rs10863417\"  \"rs10863418\" \n",
       " [281] \"rs10863420\"  \"rs1830763\"   \"rs1408078\"   \"rs4844610\"   \"rs1408077\"  \n",
       " [286] \"rs111958034\" \"rs2025632\"   \"rs12590862\"  \"rs7146179\"   \"rs12587286\" \n",
       " [291] \"rs7150808\"   \"rs2357944\"   \"rs75762751\"  \"rs4901301\"   \"rs11626419\" \n",
       " [296] \"rs12589020\"  \"rs1886785\"   \"rs1886786\"   \"rs147655286\" \"rs7152229\"  \n",
       " [301] \"rs7151643\"   \"rs7151474\"   \"rs7151491\"   \"rs6572866\"   \"rs8005234\"  \n",
       " [306] \"rs7146915\"   \"rs2025633\"   \"rs2357945\"   \"rs6572867\"   \"rs1952088\"  \n",
       " [311] \"rs17125798\"  \"rs11629431\"  \"rs7145392\"   \"rs7143400\"   \"rs6572868\"  \n",
       " [316] \"rs6572868\"   \"rs3818453\"   \"rs77026229\"  \"rs11443039\"  \"rs7158645\"  \n",
       " [321] \"rs912861\"    \"rs7144029\"   \"rs7145440\"   \"rs55685925\"  \"rs4450307\"  \n",
       " [326] \"rs7155860\"   \"rs2025634\"   \"rs77625717\"  \"rs7141335\"   \"rs11845320\" \n",
       " [331] \"rs7147258\"   \"rs1952089\"   \"rs7160582\"   \"rs1952090\"   \"rs2357946\"  \n",
       " [336] \"rs2357947\"   \"rs12435704\"  \"rs7149638\"   \"rs202222431\" \"rs11157933\" \n",
       " [341] \"rs7145242\"   \"rs7145307\"   \"rs6572869\"   \"rs7158114\"   \"rs11625479\" \n",
       " [346] \"rs9646151\"   \"rs1998776\"   \"rs200499737\" \"rs12884504\"  \"rs7158555\"  \n",
       " [351] \"rs11621275\"  \"rs4901305\"   \"rs77650471\"  \"rs34012538\"  \"rs148837982\"\n",
       " [356] \"rs8003683\"   \"rs76673112\"  \"rs75192018\"  \"rs12590744\"  \"rs73304339\" \n",
       " [361] \"rs8019279\"   \"rs8019585\"   \"rs8003334\"   \"rs73304351\"  \"rs2296495\"  \n",
       " [366] \"rs140542729\" \"rs74825460\"  \"rs17125924\"  \"rs17125944\"  \"rs149210267\"\n",
       " [371] \"rs35169358\"  \"rs10498633\"  \"rs12881735\"  \"rs36026988\"  \"rs12590654\" \n",
       " [376] \"rs11854073\"  \"rs4775087\"   \"rs12439457\"  \"rs7161889\"   \"rs7163162\"  \n",
       " [381] \"rs4774310\"   \"rs12911961\"  \"rs12911832\"  \"rs12912003\"  \"rs347117\"   \n",
       " [386] \"rs6494035\"   \"rs6494036\"   \"rs6494037\"   \"rs2555356\"   \"rs34158903\" \n",
       " [391] \"rs199804400\" \"rs67959704\"  \"rs442495\"    \"rs383902\"    \"rs653765\"   \n",
       " [396] \"rs653765\"    \"rs514049\"    \"rs593742\"    \"rs605928\"    \"rs640704\"   \n",
       " [401] \"rs2250583\"   \"rs596379\"    \"rs585192\"    \"rs507801\"    \"rs572107\"   \n",
       " [406] \"rs602602\"    \"rs650366\"    \"rs395601\"    \"rs379879\"    \"rs17190727\" \n",
       " [411] \"rs387812\"    \"rs688756\"    \"rs1648532\"   \"rs673813\"    \"rs411007\"   \n",
       " [416] \"rs421829\"    \"rs200199753\" \"rs347115\"    \"rs474875\"    \"rs2555357\"  \n",
       " [421] \"rs2604453\"   \"rs72745027\"  \"rs610877\"    \"rs452698\"    \"rs446126\"   \n",
       " [426] \"rs618684\"    \"rs4775094\"   \"rs11071398\"  \"rs117618017\" \"rs75763893\" \n",
       " [431] \"rs76855300\"  \"rs55766044\"  \"rs889555\"    \"rs2884738\"   \"rs11865499\" \n",
       " [436] \"rs28725459\"  \"rs59735493\"  \"rs1060506\"   \"rs61320757\"  \"rs60996860\" \n",
       " [441] \"rs1549299\"   \"rs78924645\"  \"rs55667375\"  \"rs9916779\"   \"rs11079866\" \n",
       " [446] \"rs686112\"    \"rs646876\"    \"rs619726\"    \"rs663576\"    \"rs850521\"   \n",
       " [451] \"rs850520\"    \"rs1010322\"   \"rs9899665\"   \"rs4793614\"   \"rs4794031\"  \n",
       " [456] \"rs2411977\"   \"rs11655466\"  \"rs4794032\"   \"rs7225606\"   \"rs7406234\"  \n",
       " [461] \"rs1124881\"   \"rs2107634\"   \"rs57345398\"  \"rs11079868\"  \"rs4794034\"  \n",
       " [466] \"rs4794035\"   \"rs11655056\"  \"rs62076398\"  \"rs3179840\"   \"rs4794036\"  \n",
       " [471] \"rs2240301\"   \"rs2960169\"   \"rs2960170\"   \"rs2960171\"   \"rs2906095\"  \n",
       " [476] \"rs2906101\"   \"rs2960164\"   \"rs2906093\"   \"rs17709919\"  \"rs12951873\" \n",
       " [481] \"rs12948660\"  \"rs747039\"    \"rs12185242\"  \"rs34255993\"  \"rs7209353\"  \n",
       " [486] \"rs9895986\"   \"rs12943264\"  \"rs187637759\" \"rs4566223\"   \"rs4514717\"  \n",
       " [491] \"rs9909827\"   \"rs4444384\"   \"rs7225787\"   \"rs28618326\"  \"rs7213090\"  \n",
       " [496] \"rs28483960\"  \"rs8081878\"   \"rs112502960\" \"rs16948048\"  \"rs12150526\" \n",
       " [501] \"rs8067459\"   \"rs12937404\"  \"rs12937634\"  \"rs67726002\"  \"rs12952581\" \n",
       " [506] \"rs7209400\"   \"rs35317317\"  \"rs28394864\"  \"rs12953014\"  \"rs28406364\" \n",
       " [511] \"rs28412876\"  \"rs113581830\" \"rs200609797\" \"rs77972827\"  \"rs7502862\"  \n",
       " [516] \"rs77493189\"  \"rs73976325\"  \"rs113762960\" \"rs78534596\"  \"rs7225151\"  \n",
       " [521] \"rs75511804\"  \"rs113260531\" \"rs57402520\"  \"rs58124010\"  \"rs4456560\"  \n",
       " [526] \"rs72479703\"  \"rs113806568\" \"rs61481506\"  \"rs78531165\"  \"rs56117162\" \n",
       " [531] \"rs77318561\"  \"rs113151753\" \"rs8077567\"   \"rs80172399\"  \"rs112065650\"\n",
       " [536] \"rs76420897\"  \"rs148132952\" \"rs79970806\"  \"rs16954523\"  \"rs56125028\" \n",
       " [541] \"rs55993740\"  \"rs55947703\"  \"rs112572092\" \"rs12600505\"  \"rs111756829\"\n",
       " [546] \"rs112421661\" \"rs75262874\"  \"rs78650284\"  \"rs57638638\"  \"rs12602528\" \n",
       " [551] \"rs79346409\"  \"rs55913010\"  \"rs111676379\" \"rs112888134\" \"rs12601720\" \n",
       " [556] \"rs16954548\"  \"rs16954552\"  \"rs16954560\"  \"rs146414631\" \"rs2526380\"  \n",
       " [561] \"rs2526378\"   \"rs2632516\"   \"rs2526377\"   \"rs116112765\" \"rs17631249\" \n",
       " [566] \"rs28369023\"  \"rs143867193\" \"rs146351285\" \"rs9906506\"   \"rs116901640\"\n",
       " [571] \"rs9912783\"   \"rs142306494\" \"rs9916165\"   \"rs187015302\" \"rs141740390\"\n",
       " [576] \"rs9898294\"   \"rs9896864\"   \"rs138190086\" \"rs189894386\" \"rs76726049\" \n",
       " [581] \"rs113349589\" \"rs8111988\"   \"rs75364577\"  \"rs112340731\" \"rs1064410\"  \n",
       " [586] \"rs1064411\"   \"rs2304260\"   \"rs11672916\"  \"rs11670349\"  \"rs11670373\" \n",
       " [591] \"rs11667191\"  \"rs11672975\"  \"rs11670441\"  \"rs11665845\"  \"rs113353568\"\n",
       " [596] \"rs111525696\" \"rs72973561\"  \"rs1141561\"   \"rs111278892\" \"rs3795064\"  \n",
       " [601] \"rs3752246\"   \"rs4147929\"   \"rs147711004\" \"rs41289512\"  \"rs146275714\"\n",
       " [606] \"rs201138989\" \"rs6857\"      \"rs59007384\"  \"rs769449\"    \"rs429358\"   \n",
       " [611] \"rs10414043\"  \"rs7256200\"   \"rs483082\"    \"rs438811\"    \"rs73052335\" \n",
       " [616] \"rs12721051\"  \"rs56131196\"  \"rs4420638\"   \"rs3865444\"   \"rs12459419\" \n",
       " [621] \"rs7245846\"   \"rs199635234\" \"rs34912427\"  \"rs33978622\"  \"rs34813869\" \n",
       " [626] \"rs1354106\"   \"rs35112940\"  \"rs200972527\" \"rs6024857\"   \"rs6014720\"  \n",
       " [631] \"rs6069736\"   \"rs6024861\"   \"rs6064392\"   \"rs6127744\"   \"rs17462136\" \n",
       " [636] \"rs73156368\"  \"rs6014722\"   \"rs6069737\"   \"rs6024870\"   \"rs6014724\"  \n",
       " [641] \"rs718022\"    \"rs56012565\"  \"rs6099146\"   \"rs76842328\"  \"rs927174\"   \n",
       " [646] \"rs7274581\"   \"rs113902203\" \"rs16979933\"  \"rs6069749\"   \"rs113221226\"\n",
       " [651] \"rs6024883\"   \"rs4663105\"   \"rs34779859\"  \"rs6733839\"   \"rs56368748\" \n",
       " [656] \"rs10171658\"  \"rs7569598\"   \"rs10933431\"  \"rs184384746\" \"rs186108507\"\n",
       " [661] \"rs180698975\" \"rs4504245\"   \"rs4373155\"   \"rs11728636\"  \"rs10939105\" \n",
       " [666] \"rs6448450\"   \"rs6448451\"   \"rs6827852\"   \"rs6846529\"   \"rs6448453\"  \n",
       " [671] \"rs4351014\"   \"rs4635810\"   \"rs4613558\"   \"rs4622992\"   \"rs1506790\"  \n",
       " [676] \"rs1876266\"   \"rs1001158\"   \"rs2904297\"   \"rs10015233\"  \"rs55706526\" \n",
       " [681] \"rs6448799\"   \"rs6856079\"   \"rs7665839\"   \"rs13119721\"  \"rs7660924\"  \n",
       " [686] \"rs10020178\"  \"rs112079809\" \"rs7698132\"   \"rs148731733\" \"rs7655906\"  \n",
       " [691] \"rs1548716\"   \"rs1548715\"   \"rs6448806\"   \"rs7671189\"   \"rs7671399\"  \n",
       " [696] \"rs1989661\"   \"rs12650238\"  \"rs6835789\"   \"rs6448807\"   \"rs6448809\"  \n",
       " [701] \"rs6820620\"   \"rs6849538\"   \"rs2191068\"   \"rs2870412\"   \"rs3971318\"  \n",
       " [706] \"rs2870411\"   \"rs10939365\"  \"rs6845397\"   \"rs6815539\"   \"rs1963802\"  \n",
       " [711] \"rs6811735\"   \"rs6842219\"   \"rs11736046\"  \"rs6848440\"   \"rs6448812\"  \n",
       " [716] \"rs3971325\"   \"rs2005806\"   \"rs6448814\"   \"rs6448815\"   \"rs3971324\"  \n",
       " [721] \"rs7656559\"   \"rs2098068\"   \"rs7698160\"   \"rs7667998\"   \"rs13119475\" \n",
       " [726] \"rs28803876\"  \"rs13106507\"  \"rs10000546\"  \"rs7664370\"   \"rs7664785\"  \n",
       " [731] \"rs13113697\"  \"rs4532251\"   \"rs7672365\"   \"rs13123697\"  \"rs2159283\"  \n",
       " [736] \"rs3849027\"   \"rs3849029\"   \"rs13125925\"  \"rs12512419\"  \"rs13133131\" \n",
       " [741] \"rs13133301\"  \"rs13134197\"  \"rs7657553\"   \"rs6821122\"   \"rs13110946\" \n",
       " [746] \"rs6825711\"   \"rs6826333\"   \"rs6831704\"   \"rs2866057\"   \"rs7668461\"  \n",
       " [751] \"rs1388861\"   \"rs13136446\"  \"rs28853604\"  \"rs11723269\"  \"rs11931875\" \n",
       " [756] \"rs7694099\"   \"rs1388867\"   \"rs1388868\"   \"rs1388869\"   \"rs1388870\"  \n",
       " [761] \"rs1388871\"   \"rs1388872\"   \"rs1388873\"   \"rs9291579\"   \"rs1388875\"  \n",
       " [766] \"rs9994554\"   \"rs10027941\"  \"rs34010171\"  \"rs35388525\"  \"rs11321903\" \n",
       " [771] \"rs2201185\"   \"rs2201186\"   \"rs7691203\"   \"rs6448822\"   \"rs33957774\" \n",
       " [776] \"rs12651498\"  \"rs12645299\"  \"rs7699210\"   \"rs7699233\"   \"rs10034595\" \n",
       " [781] \"rs7681985\"   \"rs6845480\"   \"rs6813881\"   \"rs1388865\"   \"rs1388866\"  \n",
       " [786] \"rs3921768\"   \"rs7676457\"   \"rs11730022\"  \"rs6818564\"   \"rs4627885\"  \n",
       " [791] \"rs2131236\"   \"rs1492502\"   \"rs9270568\"   \"rs9270584\"   \"rs9270594\"  \n",
       " [796] \"rs9270605\"   \"rs9270607\"   \"rs9270619\"   \"rs9270622\"   \"rs9270624\"  \n",
       " [801] \"rs9270648\"   \"rs9270650\"   \"rs9270668\"   \"rs77989767\"  \"rs9270670\"  \n",
       " [806] \"rs9270671\"   \"rs9270672\"   \"rs9270674\"   \"rs9279768\"   \"rs112777438\"\n",
       " [811] \"rs9270678\"   \"rs9270689\"   \"rs9270690\"   \"rs9270691\"   \"rs9270694\"  \n",
       " [816] \"rs142660963\" \"rs9270714\"   \"rs9270716\"   \"rs9270719\"   \"rs70993896\" \n",
       " [821] \"rs9270723\"   \"rs9270724\"   \"rs4341046\"   \"rs9270732\"   \"rs9270753\"  \n",
       " [826] \"rs34331363\"  \"rs9270754\"   \"rs9270755\"   \"rs9270756\"   \"rs9270805\"  \n",
       " [831] \"rs9270810\"   \"rs9270813\"   \"rs146374182\" \"rs146374182\" \"rs9270816\"  \n",
       " [836] \"rs9270817\"   \"rs9270823\"   \"rs9270824\"   \"rs9270827\"   \"rs9270831\"  \n",
       " [841] \"rs9270832\"   \"rs9270833\"   \"rs9270835\"   \"rs34039593\"  \"rs9270836\"  \n",
       " [846] \"rs9270838\"   \"rs9270839\"   \"rs9270840\"   \"rs9270841\"   \"rs9270842\"  \n",
       " [851] \"rs9270843\"   \"rs72318718\"  \"rs9270844\"   \"rs9270845\"   \"rs558721\"   \n",
       " [856] \"rs9270846\"   \"rs9270847\"   \"rs9270848\"   \"rs9270849\"   \"rs9270850\"  \n",
       " [861] \"rs9270851\"   \"rs9270852\"   \"rs9270853\"   \"rs9270854\"   \"rs9270856\"  \n",
       " [866] \"rs9270856\"   \"rs9270856\"   \"rs9270857\"   \"rs9270858\"   \"rs9270859\"  \n",
       " [871] \"rs679242\"    \"rs9270864\"   \"rs9270865\"   \"rs9270866\"   \"rs2647066\"  \n",
       " [876] \"rs9270873\"   \"rs9270874\"   \"rs9270885\"   \"rs9270893\"   \"rs9270902\"  \n",
       " [881] \"rs9270906\"   \"rs9270907\"   \"rs9270908\"   \"rs9270912\"   \"rs9270913\"  \n",
       " [886] \"rs9270914\"   \"rs9270915\"   \"rs9270919\"   \"rs9270920\"   \"rs9270921\"  \n",
       " [891] \"rs9270922\"   \"rs9270922\"   \"rs9270922\"   \"rs9270927\"   \"rs9270931\"  \n",
       " [896] \"rs67141839\"  \"rs9270933\"   \"rs9270934\"   \"rs9270935\"   \"rs9270937\"  \n",
       " [901] \"rs9270939\"   \"rs9270941\"   \"rs150986494\" \"rs150986494\" \"rs9270944\"  \n",
       " [906] \"rs9270945\"   \"rs9270946\"   \"rs9270947\"   \"rs9270948\"   \"rs9270949\"  \n",
       " [911] \"rs9270950\"   \"rs9270951\"   \"rs9270952\"   \"rs9270954\"   \"rs601945\"   \n",
       " [916] \"rs9270962\"   \"rs9270964\"   \"rs9270965\"   \"rs9270965\"   \"rs9270965\"  \n",
       " [921] \"rs9270967\"   \"rs9270968\"   \"rs9270969\"   \"rs9270970\"   \"rs9270971\"  \n",
       " [926] \"rs9270972\"   \"rs9270974\"   \"rs9270977\"   \"rs9270978\"   \"rs9270979\"  \n",
       " [931] \"rs9270983\"   \"rs9281928\"   \"rs9270985\"   \"rs9270987\"   \"rs9270988\"  \n",
       " [936] \"rs9270992\"   \"rs9270998\"   \"rs9270999\"   \"rs9271006\"   \"rs617578\"   \n",
       " [941] \"rs9271007\"   \"rs9271008\"   \"rs9271009\"   \"rs9271010\"   \"rs9271011\"  \n",
       " [946] \"rs9271012\"   \"rs9271013\"   \"rs9271018\"   \"rs9271019\"   \"rs9271020\"  \n",
       " [951] \"rs9271021\"   \"rs9271022\"   \"rs9271023\"   \"rs9271024\"   \"rs9271026\"  \n",
       " [956] \"rs9271028\"   \"rs7761182\"   \"rs9271049\"   \"rs9271050\"   \"rs9271051\"  \n",
       " [961] \"rs9271052\"   \"rs9271053\"   \"rs9271058\"   \"rs9271060\"   \"rs9271063\"  \n",
       " [966] \"rs9271064\"   \"rs9271066\"   \"rs9271068\"   \"rs9271070\"   \"rs9271072\"  \n",
       " [971] \"rs9271073\"   \"rs9271074\"   \"rs9271075\"   \"rs9271076\"   \"rs9271077\"  \n",
       " [976] \"rs9271078\"   \"rs9271079\"   \"rs9271081\"   \"rs9271083\"   \"rs9271086\"  \n",
       " [981] \"rs9271088\"   \"rs9271089\"   \"rs9271090\"   \"rs9281938\"   \"rs9271092\"  \n",
       " [986] \"rs9271094\"   \"rs71705525\"  \"rs9271096\"   \"rs9271097\"   \"rs9271100\"  \n",
       " [991] \"rs9271100\"   \"rs9271100\"   \"rs9271101\"   \"rs9271103\"   \"rs9271104\"  \n",
       " [996] \"rs9271105\"   \"rs9271106\"   \"rs9271107\"   \"rs9271108\"   \"rs9271109\"  \n",
       "[1001] \"rs9271110\"   \"rs9271111\"   \"rs9271117\"   \"rs9271118\"   \"rs9271144\"  \n",
       "[1006] \"rs9271145\"   \"rs9271146\"   \"rs9271149\"   \"rs9271150\"   \"rs9271151\"  \n",
       "[1011] \"rs9271153\"   \"rs9271156\"   \"rs9271162\"   \"rs9271163\"   \"rs9271164\"  \n",
       "[1016] \"rs9271165\"   \"rs9271170\"   \"rs9271171\"   \"rs532965\"    \"rs9271172\"  \n",
       "[1021] \"rs9271173\"   \"rs9271174\"   \"rs9271178\"   \"rs9271179\"   \"rs9271180\"  \n",
       "[1026] \"rs9271182\"   \"rs9271186\"   \"rs9271189\"   \"rs9271192\"   \"rs9271193\"  \n",
       "[1031] \"rs9271194\"   \"rs79267592\"  \"rs9271198\"   \"rs9271199\"   \"rs9271200\"  \n",
       "[1036] \"rs112485576\" \"rs9271201\"   \"rs9271202\"   \"rs9271205\"   \"rs9271213\"  \n",
       "[1041] \"rs9271239\"   \"rs9271240\"   \"rs202092830\" \"rs9281945\"   \"rs9271242\"  \n",
       "[1046] \"rs9271243\"   \"rs9271246\"   \"rs9271247\"   \"rs9271248\"   \"rs9271251\"  \n",
       "[1051] \"rs9271252\"   \"rs9281946\"   \"rs9271255\"   \"rs9271257\"   \"rs9271258\"  \n",
       "[1056] \"rs3997871\"   \"rs9271260\"   \"rs3997872\"   \"rs3997874\"   \"rs2894378\"  \n",
       "[1061] \"rs3104416\"   \"rs111710395\" \"rs521539\"    \"rs3129751\"   \"rs3104413\"  \n",
       "[1066] \"rs3129753\"   \"rs6605556\"   \"rs6931277\"   \"rs6941972\"   \"rs510205\"   \n",
       "[1071] \"rs114879339\" \"rs9271509\"   \"rs9271594\"   \"rs9271608\"   \"rs1281947\"  \n",
       "[1076] \"rs145342536\" \"rs187370608\" \"rs75932628\"  \"rs1931833\"   \"rs7740963\"  \n",
       "[1081] \"rs9381562\"   \"rs9473117\"   \"rs9381563\"   \"rs9369693\"   \"rs34245545\" \n",
       "[1086] \"rs9369695\"   \"rs4715018\"   \"rs60924431\"  \"rs1931837\"   \"rs9381564\"  \n",
       "[1091] \"rs1004173\"   \"rs4715019\"   \"rs9367279\"   \"rs9473119\"   \"rs9296558\"  \n",
       "[1096] \"rs9296559\"   \"rs9349407\"   \"rs4711878\"   \"rs6931478\"   \"rs9349409\"  \n",
       "[1101] \"rs142277866\" \"rs9395262\"   \"rs7738044\"   \"rs12214064\"  \"rs9473122\"  \n",
       "[1106] \"rs9473123\"   \"rs9463335\"   \"rs13211285\"  \"rs4711880\"   \"rs1872505\"  \n",
       "[1111] \"rs9473126\"   \"rs4715025\"   \"rs7749271\"   \"rs7767350\"   \"rs67769713\" \n",
       "[1116] \"rs10948363\"  \"rs9296561\"   \"rs6913202\"   \"rs13201473\"  \"rs7749167\"  \n",
       "[1121] \"rs9296564\"   \"rs7754282\"   \"rs6904764\"   \"rs9473128\"   \"rs9349413\"  \n",
       "[1126] \"rs74607583\"  \"rs7774667\"   \"rs2151974\"   \"rs2151975\"   \"rs2171089\"  \n",
       "[1131] \"rs9367284\"   \"rs6931011\"   \"rs9381575\"   \"rs34744382\"  \"rs12193051\" \n",
       "[1136] \"rs9395279\"   \"rs9357546\"   \"rs67325630\"  \"rs9395283\"   \"rs9349415\"  \n",
       "[1141] \"rs9349416\"   \"rs9369716\"   \"rs13193054\"  \"rs9296567\"   \"rs9395285\"  \n",
       "[1146] \"rs9369717\"   \"rs1485780\"   \"rs9381578\"   \"rs9381579\"   \"rs10456570\" \n",
       "[1151] \"rs6903331\"   \"rs2396825\"   \"rs9395286\"   \"rs13212790\"  \"rs9349417\"  \n",
       "[1156] \"rs9381581\"   \"rs12195738\"  \"rs9463342\"   \"rs10948367\"  \"rs1948047\"  \n",
       "[1161] \"rs143419962\" \"rs34945135\"  \"rs2171086\"   \"rs7754971\"   \"rs1476679\"  \n",
       "[1166] \"rs34919929\"  \"rs60738304\"  \"rs6971558\"   \"rs12539172\"  \"rs7791765\"  \n",
       "[1171] \"rs10808026\"  \"rs56402156\"  \"rs12703526\"  \"rs11762262\"  \"rs7810606\"  \n",
       "[1176] \"rs11763230\"  \"rs11767557\"  \"rs75045569\"  \"rs114360492\" \"rs7384878\"  \n",
       "[1181] \"rs2405442\"   \"rs1859788\"   \"rs2906657\"   \"rs34995835\"  \"rs28834970\" \n",
       "[1186] \"rs57735330\"  \"rs6987305\"   \"rs2322599\"   \"rs73223431\"  \"rs17057043\" \n",
       "[1191] \"rs755951\"    \"rs112754919\" \"rs17057051\"  \"rs7013346\"   \"rs17447007\" \n",
       "[1196] \"rs12679874\"  \"rs6557994\"   \"rs2279590\"   \"rs7982\"      \"rs7982\"     \n",
       "[1201] \"rs11136000\"  \"rs4236673\"   \"rs11787077\"  \"rs1532276\"   \"rs1532277\"  \n",
       "[1206] \"rs1532278\"   \"rs9331896\"   \"rs2070926\"   \"rs867230\"   "
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "rsids"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 7,
   "metadata": {},
   "outputs": [],
   "source": [
    "extended_data <- getExtendedView(snp='rs34388456')"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 5,
   "metadata": {},
   "outputs": [],
   "source": [
    "hg38_positions = c()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 12,
   "metadata": {},
   "outputs": [],
   "source": [
    "for (rsid in rsids) {\n",
    "    extended_data <- getExtendedView(snp=rsid)\n",
    "    hg38_pos <- as.integer(as.character(extended_data[[1]]$`Sequence facts`$`pos (hg38)`))\n",
    "    hg38_positions <- c(hg38_positions, hg38_pos)\n",
    "}"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 13,
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/html": [
       "<style>\n",
       ".list-inline {list-style: none; margin:0; padding: 0}\n",
       ".list-inline>li {display: inline-block}\n",
       ".list-inline>li:not(:last-child)::after {content: \"\\00b7\"; padding: 0 .5ex}\n",
       "</style>\n",
       "<ol class=list-inline><li>11665564</li><li>11665916</li><li>11672508</li><li>11672687</li><li>11675398</li><li>11676332</li><li>11676714</li><li>11677075</li><li>11678309</li><li>11678621</li><li>11681258</li><li>121563217</li><li>121564878</li><li>121565295</li><li>47358789</li><li>60088555</li><li>60090108</li><li>60090563</li><li>60091024</li><li>60091239</li><li>60092103</li><li>60092136</li><li>60092705</li><li>60094341</li><li>60094510</li><li>60094788</li><li>60098198</li><li>60098702</li><li>60098836</li><li>60099906</li><li>60100440</li><li>60101617</li><li>60101646</li><li>60102723</li><li>60103315</li><li>60104131</li><li>60105025</li><li>60105975</li><li>60107002</li><li>60107344</li><li>60108112</li><li>60108563</li><li>60109670</li><li>60109921</li><li>60110224</li><li>60110494</li><li>60110528</li><li>60112565</li><li>60114051</li><li>60114088</li><li>60114833</li><li>60117647</li><li>60118020</li><li>60118415</li><li>60123201</li><li>60129428</li><li>60132438</li><li>60132633</li><li>60133102</li><li>60135326</li><li>60135814</li><li>60136320</li><li>60137486</li><li>60139003</li><li>60139319</li><li>60139499</li><li>60139624</li><li>60139926</li><li>60142137</li><li>60142174</li><li>60143688</li><li>60146333</li><li>60146794</li><li>60147253</li><li>60147656</li><li>60148614</li><li>60148780</li><li>60149276</li><li>60149432</li><li>60150689</li><li>60151032</li><li>60151140</li><li>60151139</li><li>60151364</li><li>60151692</li><li>60152758</li><li>60153032</li><li>60154123</li><li>60154847</li><li>60155608</li><li>60155721</li><li>60156035</li><li>60156518</li><li>60156949</li><li>60157486</li><li>60158783</li><li>60159566</li><li>60160011</li><li>60161199</li><li>60164550</li><li>60164551</li><li>60165106</li><li>60166019</li><li>60169284</li><li>60169453</li><li>60169506</li><li>60171834</li><li>60173126</li><li>60174608</li><li>60175284</li><li>60175342</li><li>60175636</li><li>60177107</li><li>60177337</li><li>60177425</li><li>60177592</li><li>60178272</li><li>60179779</li><li>60180901</li><li>60183960</li><li>60185840</li><li>60187884</li><li>60189465</li><li>60189619</li><li>60190040</li><li>60190907</li><li>60191214</li><li>60192370</li><li>60192496</li><li>60193954</li><li>60194013</li><li>60194313</li><li>60194693</li><li>60194716</li><li>60197519</li><li>60198252</li><li>60198316</li><li>60198822</li><li>60200053</li><li>60200334</li><li>60200358</li><li>60200909</li><li>60201268</li><li>60206456</li><li>60207605</li><li>60207692</li><li>60208638</li><li>60210782</li><li>60212842</li><li>60213745</li><li>60214328</li><li>60214997</li><li>60217203</li><li>60218860</li><li>60218926</li><li>60219344</li><li>60221957</li><li>60223860</li><li>60225873</li><li>60225873</li><li>60228793</li><li>60229495</li><li>60229521</li><li>60231490</li><li>60233101</li><li>60233852</li><li>60235462</li><li>60237795</li><li>60237951</li><li>60240678</li><li>60243540</li><li>60244037</li><li>60245200</li><li>60245978</li><li>60246201</li><li>60246384</li><li>60248914</li><li>60249459</li><li>60251677</li><li>60251688</li><li>60252639</li><li>60255614</li><li>60256535</li><li>60258092</li><li>60259140</li><li>60260669</li><li>60261467</li><li>&lt;NA&gt;</li><li>60262476</li><li>60262984</li><li>60263083</li><li>60263086</li><li>60263797</li><li>60263926</li><li>60264003</li><li>60265898</li><li>60265975</li><li>60266956</li><li>60272444</li><li>60273823</li><li>⋯</li><li>32609697</li><li>32609772</li><li>32609813</li><li>32609938</li><li>32609956</li><li>32610007</li><li>32610008</li><li>32610112</li><li>32610130</li><li>32610196</li><li>32610198</li><li>32610204</li><li>32610263</li><li>32610414</li><li>32610419</li><li>32610432</li><li>32610453</li><li>32610520</li><li>32610580</li><li>32610753</li><li>32610789</li><li>32610835</li><li>32610896</li><li>32610949</li><li>32610958</li><li>32610979</li><li>32610995</li><li>32611041</li><li>32611060</li><li>32611164</li><li>32611434</li><li>32611992</li><li>32612056</li><li>32612124</li><li>&lt;NA&gt;</li><li>32612163</li><li>32612174</li><li>32612307</li><li>32612335</li><li>32612380</li><li>32612464</li><li>32612511</li><li>32612567</li><li>32612580</li><li>32612667</li><li>32612669</li><li>32612679</li><li>32612730</li><li>32612840</li><li>32612964</li><li>32613103</li><li>32613725</li><li>32613963</li><li>32614196</li><li>32614412</li><li>32614873</li><li>32615250</li><li>32615322</li><li>32615580</li><li>32615752</li><li>32616916</li><li>32619573</li><li>32621638</li><li>32623436</li><li>32623811</li><li>32624232</li><li>40944149</li><li>40974457</li><li>41161514</li><li>47459545</li><li>47459875</li><li>47462031</li><li>47463548</li><li>47464901</li><li>47466015</li><li>47469961</li><li>47472829</li><li>47474135</li><li>47474418</li><li>47474641</li><li>47476070</li><li>47477281</li><li>47479305</li><li>47480600</li><li>47482882</li><li>47484147</li><li>47484534</li><li>47485642</li><li>47488382</li><li>47494177</li><li>47495390</li><li>&lt;NA&gt;</li><li>47497531</li><li>47501537</li><li>47505471</li><li>47507226</li><li>47507603</li><li>47511400</li><li>47511882</li><li>47512940</li><li>47513239</li><li>47514097</li><li>47515917</li><li>47517266</li><li>47517390</li><li>47519361</li><li>47520026</li><li>47521202</li><li>47521368</li><li>47521972</li><li>47526204</li><li>47527023</li><li>47534288</li><li>47535761</li><li>47537274</li><li>47543755</li><li>&lt;NA&gt;</li><li>47547022</li><li>47547894</li><li>47547927</li><li>47548075</li><li>47548633</li><li>47557466</li><li>47561028</li><li>47568708</li><li>47573679</li><li>47575128</li><li>47581759</li><li>47582793</li><li>47583708</li><li>47584125</li><li>47584202</li><li>47584444</li><li>47585081</li><li>47585666</li><li>47586441</li><li>47586732</li><li>47588894</li><li>47588898</li><li>47588944</li><li>47591715</li><li>47595179</li><li>47600960</li><li>47607596</li><li>47608631</li><li>47612921</li><li>47612959</li><li>47615928</li><li>47617370</li><li>47617879</li><li>47618176</li><li>47619313</li><li>47619558</li><li>47622368</li><li>47622740</li><li>100406823</li><li>100414711</li><li>100414956</li><li>100482234</li><li>100494172</li><li>143402014</li><li>143402040</li><li>143406388</li><li>143410495</li><li>143410783</li><li>143411065</li><li>143411748</li><li>143412046</li><li>143412115</li><li>146252937</li><li>100334426</li><li>100373690</li><li>100374211</li><li>100386466</li><li>100392741</li><li>27337604</li><li>27347529</li><li>27350609</li><li>27354393</li><li>27362470</li><li>27362793</li><li>27369273</li><li>27369936</li><li>27370037</li><li>27371149</li><li>27373120</li><li>27373302</li><li>27374501</li><li>27598736</li><li>27604964</li><li>27604964</li><li>27607002</li><li>27607412</li><li>27607795</li><li>27608640</li><li>27608664</li><li>27608798</li><li>27610169</li><li>27610304</li><li>27610986</li></ol>\n"
      ],
      "text/latex": [
       "\\begin{enumerate*}\n",
       "\\item 11665564\n",
       "\\item 11665916\n",
       "\\item 11672508\n",
       "\\item 11672687\n",
       "\\item 11675398\n",
       "\\item 11676332\n",
       "\\item 11676714\n",
       "\\item 11677075\n",
       "\\item 11678309\n",
       "\\item 11678621\n",
       "\\item 11681258\n",
       "\\item 121563217\n",
       "\\item 121564878\n",
       "\\item 121565295\n",
       "\\item 47358789\n",
       "\\item 60088555\n",
       "\\item 60090108\n",
       "\\item 60090563\n",
       "\\item 60091024\n",
       "\\item 60091239\n",
       "\\item 60092103\n",
       "\\item 60092136\n",
       "\\item 60092705\n",
       "\\item 60094341\n",
       "\\item 60094510\n",
       "\\item 60094788\n",
       "\\item 60098198\n",
       "\\item 60098702\n",
       "\\item 60098836\n",
       "\\item 60099906\n",
       "\\item 60100440\n",
       "\\item 60101617\n",
       "\\item 60101646\n",
       "\\item 60102723\n",
       "\\item 60103315\n",
       "\\item 60104131\n",
       "\\item 60105025\n",
       "\\item 60105975\n",
       "\\item 60107002\n",
       "\\item 60107344\n",
       "\\item 60108112\n",
       "\\item 60108563\n",
       "\\item 60109670\n",
       "\\item 60109921\n",
       "\\item 60110224\n",
       "\\item 60110494\n",
       "\\item 60110528\n",
       "\\item 60112565\n",
       "\\item 60114051\n",
       "\\item 60114088\n",
       "\\item 60114833\n",
       "\\item 60117647\n",
       "\\item 60118020\n",
       "\\item 60118415\n",
       "\\item 60123201\n",
       "\\item 60129428\n",
       "\\item 60132438\n",
       "\\item 60132633\n",
       "\\item 60133102\n",
       "\\item 60135326\n",
       "\\item 60135814\n",
       "\\item 60136320\n",
       "\\item 60137486\n",
       "\\item 60139003\n",
       "\\item 60139319\n",
       "\\item 60139499\n",
       "\\item 60139624\n",
       "\\item 60139926\n",
       "\\item 60142137\n",
       "\\item 60142174\n",
       "\\item 60143688\n",
       "\\item 60146333\n",
       "\\item 60146794\n",
       "\\item 60147253\n",
       "\\item 60147656\n",
       "\\item 60148614\n",
       "\\item 60148780\n",
       "\\item 60149276\n",
       "\\item 60149432\n",
       "\\item 60150689\n",
       "\\item 60151032\n",
       "\\item 60151140\n",
       "\\item 60151139\n",
       "\\item 60151364\n",
       "\\item 60151692\n",
       "\\item 60152758\n",
       "\\item 60153032\n",
       "\\item 60154123\n",
       "\\item 60154847\n",
       "\\item 60155608\n",
       "\\item 60155721\n",
       "\\item 60156035\n",
       "\\item 60156518\n",
       "\\item 60156949\n",
       "\\item 60157486\n",
       "\\item 60158783\n",
       "\\item 60159566\n",
       "\\item 60160011\n",
       "\\item 60161199\n",
       "\\item 60164550\n",
       "\\item 60164551\n",
       "\\item 60165106\n",
       "\\item 60166019\n",
       "\\item 60169284\n",
       "\\item 60169453\n",
       "\\item 60169506\n",
       "\\item 60171834\n",
       "\\item 60173126\n",
       "\\item 60174608\n",
       "\\item 60175284\n",
       "\\item 60175342\n",
       "\\item 60175636\n",
       "\\item 60177107\n",
       "\\item 60177337\n",
       "\\item 60177425\n",
       "\\item 60177592\n",
       "\\item 60178272\n",
       "\\item 60179779\n",
       "\\item 60180901\n",
       "\\item 60183960\n",
       "\\item 60185840\n",
       "\\item 60187884\n",
       "\\item 60189465\n",
       "\\item 60189619\n",
       "\\item 60190040\n",
       "\\item 60190907\n",
       "\\item 60191214\n",
       "\\item 60192370\n",
       "\\item 60192496\n",
       "\\item 60193954\n",
       "\\item 60194013\n",
       "\\item 60194313\n",
       "\\item 60194693\n",
       "\\item 60194716\n",
       "\\item 60197519\n",
       "\\item 60198252\n",
       "\\item 60198316\n",
       "\\item 60198822\n",
       "\\item 60200053\n",
       "\\item 60200334\n",
       "\\item 60200358\n",
       "\\item 60200909\n",
       "\\item 60201268\n",
       "\\item 60206456\n",
       "\\item 60207605\n",
       "\\item 60207692\n",
       "\\item 60208638\n",
       "\\item 60210782\n",
       "\\item 60212842\n",
       "\\item 60213745\n",
       "\\item 60214328\n",
       "\\item 60214997\n",
       "\\item 60217203\n",
       "\\item 60218860\n",
       "\\item 60218926\n",
       "\\item 60219344\n",
       "\\item 60221957\n",
       "\\item 60223860\n",
       "\\item 60225873\n",
       "\\item 60225873\n",
       "\\item 60228793\n",
       "\\item 60229495\n",
       "\\item 60229521\n",
       "\\item 60231490\n",
       "\\item 60233101\n",
       "\\item 60233852\n",
       "\\item 60235462\n",
       "\\item 60237795\n",
       "\\item 60237951\n",
       "\\item 60240678\n",
       "\\item 60243540\n",
       "\\item 60244037\n",
       "\\item 60245200\n",
       "\\item 60245978\n",
       "\\item 60246201\n",
       "\\item 60246384\n",
       "\\item 60248914\n",
       "\\item 60249459\n",
       "\\item 60251677\n",
       "\\item 60251688\n",
       "\\item 60252639\n",
       "\\item 60255614\n",
       "\\item 60256535\n",
       "\\item 60258092\n",
       "\\item 60259140\n",
       "\\item 60260669\n",
       "\\item 60261467\n",
       "\\item <NA>\n",
       "\\item 60262476\n",
       "\\item 60262984\n",
       "\\item 60263083\n",
       "\\item 60263086\n",
       "\\item 60263797\n",
       "\\item 60263926\n",
       "\\item 60264003\n",
       "\\item 60265898\n",
       "\\item 60265975\n",
       "\\item 60266956\n",
       "\\item 60272444\n",
       "\\item 60273823\n",
       "\\item ⋯\n",
       "\\item 32609697\n",
       "\\item 32609772\n",
       "\\item 32609813\n",
       "\\item 32609938\n",
       "\\item 32609956\n",
       "\\item 32610007\n",
       "\\item 32610008\n",
       "\\item 32610112\n",
       "\\item 32610130\n",
       "\\item 32610196\n",
       "\\item 32610198\n",
       "\\item 32610204\n",
       "\\item 32610263\n",
       "\\item 32610414\n",
       "\\item 32610419\n",
       "\\item 32610432\n",
       "\\item 32610453\n",
       "\\item 32610520\n",
       "\\item 32610580\n",
       "\\item 32610753\n",
       "\\item 32610789\n",
       "\\item 32610835\n",
       "\\item 32610896\n",
       "\\item 32610949\n",
       "\\item 32610958\n",
       "\\item 32610979\n",
       "\\item 32610995\n",
       "\\item 32611041\n",
       "\\item 32611060\n",
       "\\item 32611164\n",
       "\\item 32611434\n",
       "\\item 32611992\n",
       "\\item 32612056\n",
       "\\item 32612124\n",
       "\\item <NA>\n",
       "\\item 32612163\n",
       "\\item 32612174\n",
       "\\item 32612307\n",
       "\\item 32612335\n",
       "\\item 32612380\n",
       "\\item 32612464\n",
       "\\item 32612511\n",
       "\\item 32612567\n",
       "\\item 32612580\n",
       "\\item 32612667\n",
       "\\item 32612669\n",
       "\\item 32612679\n",
       "\\item 32612730\n",
       "\\item 32612840\n",
       "\\item 32612964\n",
       "\\item 32613103\n",
       "\\item 32613725\n",
       "\\item 32613963\n",
       "\\item 32614196\n",
       "\\item 32614412\n",
       "\\item 32614873\n",
       "\\item 32615250\n",
       "\\item 32615322\n",
       "\\item 32615580\n",
       "\\item 32615752\n",
       "\\item 32616916\n",
       "\\item 32619573\n",
       "\\item 32621638\n",
       "\\item 32623436\n",
       "\\item 32623811\n",
       "\\item 32624232\n",
       "\\item 40944149\n",
       "\\item 40974457\n",
       "\\item 41161514\n",
       "\\item 47459545\n",
       "\\item 47459875\n",
       "\\item 47462031\n",
       "\\item 47463548\n",
       "\\item 47464901\n",
       "\\item 47466015\n",
       "\\item 47469961\n",
       "\\item 47472829\n",
       "\\item 47474135\n",
       "\\item 47474418\n",
       "\\item 47474641\n",
       "\\item 47476070\n",
       "\\item 47477281\n",
       "\\item 47479305\n",
       "\\item 47480600\n",
       "\\item 47482882\n",
       "\\item 47484147\n",
       "\\item 47484534\n",
       "\\item 47485642\n",
       "\\item 47488382\n",
       "\\item 47494177\n",
       "\\item 47495390\n",
       "\\item <NA>\n",
       "\\item 47497531\n",
       "\\item 47501537\n",
       "\\item 47505471\n",
       "\\item 47507226\n",
       "\\item 47507603\n",
       "\\item 47511400\n",
       "\\item 47511882\n",
       "\\item 47512940\n",
       "\\item 47513239\n",
       "\\item 47514097\n",
       "\\item 47515917\n",
       "\\item 47517266\n",
       "\\item 47517390\n",
       "\\item 47519361\n",
       "\\item 47520026\n",
       "\\item 47521202\n",
       "\\item 47521368\n",
       "\\item 47521972\n",
       "\\item 47526204\n",
       "\\item 47527023\n",
       "\\item 47534288\n",
       "\\item 47535761\n",
       "\\item 47537274\n",
       "\\item 47543755\n",
       "\\item <NA>\n",
       "\\item 47547022\n",
       "\\item 47547894\n",
       "\\item 47547927\n",
       "\\item 47548075\n",
       "\\item 47548633\n",
       "\\item 47557466\n",
       "\\item 47561028\n",
       "\\item 47568708\n",
       "\\item 47573679\n",
       "\\item 47575128\n",
       "\\item 47581759\n",
       "\\item 47582793\n",
       "\\item 47583708\n",
       "\\item 47584125\n",
       "\\item 47584202\n",
       "\\item 47584444\n",
       "\\item 47585081\n",
       "\\item 47585666\n",
       "\\item 47586441\n",
       "\\item 47586732\n",
       "\\item 47588894\n",
       "\\item 47588898\n",
       "\\item 47588944\n",
       "\\item 47591715\n",
       "\\item 47595179\n",
       "\\item 47600960\n",
       "\\item 47607596\n",
       "\\item 47608631\n",
       "\\item 47612921\n",
       "\\item 47612959\n",
       "\\item 47615928\n",
       "\\item 47617370\n",
       "\\item 47617879\n",
       "\\item 47618176\n",
       "\\item 47619313\n",
       "\\item 47619558\n",
       "\\item 47622368\n",
       "\\item 47622740\n",
       "\\item 100406823\n",
       "\\item 100414711\n",
       "\\item 100414956\n",
       "\\item 100482234\n",
       "\\item 100494172\n",
       "\\item 143402014\n",
       "\\item 143402040\n",
       "\\item 143406388\n",
       "\\item 143410495\n",
       "\\item 143410783\n",
       "\\item 143411065\n",
       "\\item 143411748\n",
       "\\item 143412046\n",
       "\\item 143412115\n",
       "\\item 146252937\n",
       "\\item 100334426\n",
       "\\item 100373690\n",
       "\\item 100374211\n",
       "\\item 100386466\n",
       "\\item 100392741\n",
       "\\item 27337604\n",
       "\\item 27347529\n",
       "\\item 27350609\n",
       "\\item 27354393\n",
       "\\item 27362470\n",
       "\\item 27362793\n",
       "\\item 27369273\n",
       "\\item 27369936\n",
       "\\item 27370037\n",
       "\\item 27371149\n",
       "\\item 27373120\n",
       "\\item 27373302\n",
       "\\item 27374501\n",
       "\\item 27598736\n",
       "\\item 27604964\n",
       "\\item 27604964\n",
       "\\item 27607002\n",
       "\\item 27607412\n",
       "\\item 27607795\n",
       "\\item 27608640\n",
       "\\item 27608664\n",
       "\\item 27608798\n",
       "\\item 27610169\n",
       "\\item 27610304\n",
       "\\item 27610986\n",
       "\\end{enumerate*}\n"
      ],
      "text/markdown": [
       "1. 11665564\n",
       "2. 11665916\n",
       "3. 11672508\n",
       "4. 11672687\n",
       "5. 11675398\n",
       "6. 11676332\n",
       "7. 11676714\n",
       "8. 11677075\n",
       "9. 11678309\n",
       "10. 11678621\n",
       "11. 11681258\n",
       "12. 121563217\n",
       "13. 121564878\n",
       "14. 121565295\n",
       "15. 47358789\n",
       "16. 60088555\n",
       "17. 60090108\n",
       "18. 60090563\n",
       "19. 60091024\n",
       "20. 60091239\n",
       "21. 60092103\n",
       "22. 60092136\n",
       "23. 60092705\n",
       "24. 60094341\n",
       "25. 60094510\n",
       "26. 60094788\n",
       "27. 60098198\n",
       "28. 60098702\n",
       "29. 60098836\n",
       "30. 60099906\n",
       "31. 60100440\n",
       "32. 60101617\n",
       "33. 60101646\n",
       "34. 60102723\n",
       "35. 60103315\n",
       "36. 60104131\n",
       "37. 60105025\n",
       "38. 60105975\n",
       "39. 60107002\n",
       "40. 60107344\n",
       "41. 60108112\n",
       "42. 60108563\n",
       "43. 60109670\n",
       "44. 60109921\n",
       "45. 60110224\n",
       "46. 60110494\n",
       "47. 60110528\n",
       "48. 60112565\n",
       "49. 60114051\n",
       "50. 60114088\n",
       "51. 60114833\n",
       "52. 60117647\n",
       "53. 60118020\n",
       "54. 60118415\n",
       "55. 60123201\n",
       "56. 60129428\n",
       "57. 60132438\n",
       "58. 60132633\n",
       "59. 60133102\n",
       "60. 60135326\n",
       "61. 60135814\n",
       "62. 60136320\n",
       "63. 60137486\n",
       "64. 60139003\n",
       "65. 60139319\n",
       "66. 60139499\n",
       "67. 60139624\n",
       "68. 60139926\n",
       "69. 60142137\n",
       "70. 60142174\n",
       "71. 60143688\n",
       "72. 60146333\n",
       "73. 60146794\n",
       "74. 60147253\n",
       "75. 60147656\n",
       "76. 60148614\n",
       "77. 60148780\n",
       "78. 60149276\n",
       "79. 60149432\n",
       "80. 60150689\n",
       "81. 60151032\n",
       "82. 60151140\n",
       "83. 60151139\n",
       "84. 60151364\n",
       "85. 60151692\n",
       "86. 60152758\n",
       "87. 60153032\n",
       "88. 60154123\n",
       "89. 60154847\n",
       "90. 60155608\n",
       "91. 60155721\n",
       "92. 60156035\n",
       "93. 60156518\n",
       "94. 60156949\n",
       "95. 60157486\n",
       "96. 60158783\n",
       "97. 60159566\n",
       "98. 60160011\n",
       "99. 60161199\n",
       "100. 60164550\n",
       "101. 60164551\n",
       "102. 60165106\n",
       "103. 60166019\n",
       "104. 60169284\n",
       "105. 60169453\n",
       "106. 60169506\n",
       "107. 60171834\n",
       "108. 60173126\n",
       "109. 60174608\n",
       "110. 60175284\n",
       "111. 60175342\n",
       "112. 60175636\n",
       "113. 60177107\n",
       "114. 60177337\n",
       "115. 60177425\n",
       "116. 60177592\n",
       "117. 60178272\n",
       "118. 60179779\n",
       "119. 60180901\n",
       "120. 60183960\n",
       "121. 60185840\n",
       "122. 60187884\n",
       "123. 60189465\n",
       "124. 60189619\n",
       "125. 60190040\n",
       "126. 60190907\n",
       "127. 60191214\n",
       "128. 60192370\n",
       "129. 60192496\n",
       "130. 60193954\n",
       "131. 60194013\n",
       "132. 60194313\n",
       "133. 60194693\n",
       "134. 60194716\n",
       "135. 60197519\n",
       "136. 60198252\n",
       "137. 60198316\n",
       "138. 60198822\n",
       "139. 60200053\n",
       "140. 60200334\n",
       "141. 60200358\n",
       "142. 60200909\n",
       "143. 60201268\n",
       "144. 60206456\n",
       "145. 60207605\n",
       "146. 60207692\n",
       "147. 60208638\n",
       "148. 60210782\n",
       "149. 60212842\n",
       "150. 60213745\n",
       "151. 60214328\n",
       "152. 60214997\n",
       "153. 60217203\n",
       "154. 60218860\n",
       "155. 60218926\n",
       "156. 60219344\n",
       "157. 60221957\n",
       "158. 60223860\n",
       "159. 60225873\n",
       "160. 60225873\n",
       "161. 60228793\n",
       "162. 60229495\n",
       "163. 60229521\n",
       "164. 60231490\n",
       "165. 60233101\n",
       "166. 60233852\n",
       "167. 60235462\n",
       "168. 60237795\n",
       "169. 60237951\n",
       "170. 60240678\n",
       "171. 60243540\n",
       "172. 60244037\n",
       "173. 60245200\n",
       "174. 60245978\n",
       "175. 60246201\n",
       "176. 60246384\n",
       "177. 60248914\n",
       "178. 60249459\n",
       "179. 60251677\n",
       "180. 60251688\n",
       "181. 60252639\n",
       "182. 60255614\n",
       "183. 60256535\n",
       "184. 60258092\n",
       "185. 60259140\n",
       "186. 60260669\n",
       "187. 60261467\n",
       "188. &lt;NA&gt;\n",
       "189. 60262476\n",
       "190. 60262984\n",
       "191. 60263083\n",
       "192. 60263086\n",
       "193. 60263797\n",
       "194. 60263926\n",
       "195. 60264003\n",
       "196. 60265898\n",
       "197. 60265975\n",
       "198. 60266956\n",
       "199. 60272444\n",
       "200. 60273823\n",
       "201. ⋯\n",
       "202. 32609697\n",
       "203. 32609772\n",
       "204. 32609813\n",
       "205. 32609938\n",
       "206. 32609956\n",
       "207. 32610007\n",
       "208. 32610008\n",
       "209. 32610112\n",
       "210. 32610130\n",
       "211. 32610196\n",
       "212. 32610198\n",
       "213. 32610204\n",
       "214. 32610263\n",
       "215. 32610414\n",
       "216. 32610419\n",
       "217. 32610432\n",
       "218. 32610453\n",
       "219. 32610520\n",
       "220. 32610580\n",
       "221. 32610753\n",
       "222. 32610789\n",
       "223. 32610835\n",
       "224. 32610896\n",
       "225. 32610949\n",
       "226. 32610958\n",
       "227. 32610979\n",
       "228. 32610995\n",
       "229. 32611041\n",
       "230. 32611060\n",
       "231. 32611164\n",
       "232. 32611434\n",
       "233. 32611992\n",
       "234. 32612056\n",
       "235. 32612124\n",
       "236. &lt;NA&gt;\n",
       "237. 32612163\n",
       "238. 32612174\n",
       "239. 32612307\n",
       "240. 32612335\n",
       "241. 32612380\n",
       "242. 32612464\n",
       "243. 32612511\n",
       "244. 32612567\n",
       "245. 32612580\n",
       "246. 32612667\n",
       "247. 32612669\n",
       "248. 32612679\n",
       "249. 32612730\n",
       "250. 32612840\n",
       "251. 32612964\n",
       "252. 32613103\n",
       "253. 32613725\n",
       "254. 32613963\n",
       "255. 32614196\n",
       "256. 32614412\n",
       "257. 32614873\n",
       "258. 32615250\n",
       "259. 32615322\n",
       "260. 32615580\n",
       "261. 32615752\n",
       "262. 32616916\n",
       "263. 32619573\n",
       "264. 32621638\n",
       "265. 32623436\n",
       "266. 32623811\n",
       "267. 32624232\n",
       "268. 40944149\n",
       "269. 40974457\n",
       "270. 41161514\n",
       "271. 47459545\n",
       "272. 47459875\n",
       "273. 47462031\n",
       "274. 47463548\n",
       "275. 47464901\n",
       "276. 47466015\n",
       "277. 47469961\n",
       "278. 47472829\n",
       "279. 47474135\n",
       "280. 47474418\n",
       "281. 47474641\n",
       "282. 47476070\n",
       "283. 47477281\n",
       "284. 47479305\n",
       "285. 47480600\n",
       "286. 47482882\n",
       "287. 47484147\n",
       "288. 47484534\n",
       "289. 47485642\n",
       "290. 47488382\n",
       "291. 47494177\n",
       "292. 47495390\n",
       "293. &lt;NA&gt;\n",
       "294. 47497531\n",
       "295. 47501537\n",
       "296. 47505471\n",
       "297. 47507226\n",
       "298. 47507603\n",
       "299. 47511400\n",
       "300. 47511882\n",
       "301. 47512940\n",
       "302. 47513239\n",
       "303. 47514097\n",
       "304. 47515917\n",
       "305. 47517266\n",
       "306. 47517390\n",
       "307. 47519361\n",
       "308. 47520026\n",
       "309. 47521202\n",
       "310. 47521368\n",
       "311. 47521972\n",
       "312. 47526204\n",
       "313. 47527023\n",
       "314. 47534288\n",
       "315. 47535761\n",
       "316. 47537274\n",
       "317. 47543755\n",
       "318. &lt;NA&gt;\n",
       "319. 47547022\n",
       "320. 47547894\n",
       "321. 47547927\n",
       "322. 47548075\n",
       "323. 47548633\n",
       "324. 47557466\n",
       "325. 47561028\n",
       "326. 47568708\n",
       "327. 47573679\n",
       "328. 47575128\n",
       "329. 47581759\n",
       "330. 47582793\n",
       "331. 47583708\n",
       "332. 47584125\n",
       "333. 47584202\n",
       "334. 47584444\n",
       "335. 47585081\n",
       "336. 47585666\n",
       "337. 47586441\n",
       "338. 47586732\n",
       "339. 47588894\n",
       "340. 47588898\n",
       "341. 47588944\n",
       "342. 47591715\n",
       "343. 47595179\n",
       "344. 47600960\n",
       "345. 47607596\n",
       "346. 47608631\n",
       "347. 47612921\n",
       "348. 47612959\n",
       "349. 47615928\n",
       "350. 47617370\n",
       "351. 47617879\n",
       "352. 47618176\n",
       "353. 47619313\n",
       "354. 47619558\n",
       "355. 47622368\n",
       "356. 47622740\n",
       "357. 100406823\n",
       "358. 100414711\n",
       "359. 100414956\n",
       "360. 100482234\n",
       "361. 100494172\n",
       "362. 143402014\n",
       "363. 143402040\n",
       "364. 143406388\n",
       "365. 143410495\n",
       "366. 143410783\n",
       "367. 143411065\n",
       "368. 143411748\n",
       "369. 143412046\n",
       "370. 143412115\n",
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       "387. 27373120\n",
       "388. 27373302\n",
       "389. 27374501\n",
       "390. 27598736\n",
       "391. 27604964\n",
       "392. 27604964\n",
       "393. 27607002\n",
       "394. 27607412\n",
       "395. 27607795\n",
       "396. 27608640\n",
       "397. 27608664\n",
       "398. 27608798\n",
       "399. 27610169\n",
       "400. 27610304\n",
       "401. 27610986\n",
       "\n",
       "\n"
      ],
      "text/plain": [
       "   [1]  11665564  11665916  11672508  11672687  11675398  11676332  11676714\n",
       "   [8]  11677075  11678309  11678621  11681258 121563217 121564878 121565295\n",
       "  [15]  47358789  60088555  60090108  60090563  60091024  60091239  60092103\n",
       "  [22]  60092136  60092705  60094341  60094510  60094788  60098198  60098702\n",
       "  [29]  60098836  60099906  60100440  60101617  60101646  60102723  60103315\n",
       "  [36]  60104131  60105025  60105975  60107002  60107344  60108112  60108563\n",
       "  [43]  60109670  60109921  60110224  60110494  60110528  60112565  60114051\n",
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       "  [92]  60156035  60156518  60156949  60157486  60158783  60159566  60160011\n",
       "  [99]  60161199  60164550  60164551  60165106  60166019  60169284  60169453\n",
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       " [113]  60177107  60177337  60177425  60177592  60178272  60179779  60180901\n",
       " [120]  60183960  60185840  60187884  60189465  60189619  60190040  60190907\n",
       " [127]  60191214  60192370  60192496  60193954  60194013  60194313  60194693\n",
       " [134]  60194716  60197519  60198252  60198316  60198822  60200053  60200334\n",
       " [141]  60200358  60200909  60201268  60206456  60207605  60207692  60208638\n",
       " [148]  60210782  60212842  60213745  60214328  60214997  60217203  60218860\n",
       " [155]  60218926  60219344  60221957  60223860  60225873  60225873  60228793\n",
       " [162]  60229495  60229521  60231490  60233101  60233852  60235462  60237795\n",
       " [169]  60237951  60240678  60243540  60244037  60245200  60245978  60246201\n",
       " [176]  60246384  60248914  60249459  60251677  60251688  60252639  60255614\n",
       " [183]  60256535  60258092  60259140  60260669  60261467        NA  60262476\n",
       " [190]  60262984  60263083  60263086  60263797  60263926  60264003  60265898\n",
       " [197]  60265975  60266956  60272444  60273823 161156643 161180073 161182054\n",
       " [204] 161185602 161186243  85959342  85959902  85960209  85960209  85970540\n",
       " [211]  85971774  85978669  85980767  86006880  86007188  86013618  86022770\n",
       " [218]  86022967  86029367  86030088  86031175  86034995  86035769  86037254\n",
       " [225]  86037344  86039629  86046547  86046571  86046575  86048986  86051202\n",
       " [232]  86054256  86063377  86065502  86076782  86077309  86083500  86083718\n",
       " [239]        NA  86084482  86084908  86086978  86089237  86100322  86100654\n",
       " [246]  86101168  86103444  86103988  86109035  86113817        NA  86117509\n",
       " [253]  86119115  86120204  86120499  86120648  86121382  86128365  86145145\n",
       " [260]  86147496  86156833  86157598 207505962 207505962 207510847 207512441\n",
       " [267] 207512620 207518704 207524699 207564732 207573951 207577223 207611623\n",
       " [274] 207612944 207613197 207613483 207621975 207621975 207623552 207624893\n",
       " [281] 207626529 207627044 207627210 207629207 207630796        NA  52827601\n",
       " [288]  52830290  52832135  52838033  52838153  52838855  52838908  52839767\n",
       " [295]  52840535  52845284  52845388  52845471  52846057  52846687  52846943\n",
       " [302]  52846962  52846993  52848126  52848462  52849321  52850622  52851716\n",
       " [309]  52852565  52853114  52853187  52853810  52854298  52858173  52858372\n",
       " [316]  52858372  52859736  52860064  52863251  52865434  52866572  52866898\n",
       " [323]  52866999  52867828  52868065  52868511  52869299  52869826  52870216\n",
       " [330]  52870317  52870946  52873059  52874727  52876274  52878548  52878660\n",
       " [337]  52879856  52880213  52882787  52883080  52883124  52884528  52886736\n",
       " [344]  52886753  52887454  52887746  52888872  52892447  52893776  52895288\n",
       " [351]  52896598  52897553  52897589  52898733  52899295  52899887  52899974\n",
       " [358]  52900495  52902770  52904635  52908059  52908125  52908249  52908422\n",
       " [365]  52913160  52916127  52923297  52924962  52933911  52947427  52967469\n",
       " [372]  92460608  92466484  92472038  92472511  58680796  58682705  58690191\n",
       " [379]  58691226  58691389  58692965  58693668  58693705  58693802  58708758\n",
       " [386]  58723689  58723762  58724116  58724232  58727205  58730001  58730002\n",
       " [393]  58730416  58741975  58749813  58749813  58750164  58753575  58753964\n",
       " [400]  58756822  58758183  58759873  58760011  58761146  58763611  58764824\n",
       " [407]  58768943  58770997  58778977  58781591  58782587  58784073  58784579\n",
       " [414]  58784972  58786303  58787703  58790587  58790760  58794504  58794916\n",
       " [421]  58797313  58802130  58811129  58813372  58820903  58823723  58823796\n",
       " [428]  58827878  63277703  63279621  63303679  31106377  31111250  31115000\n",
       " [435]  31120929  31121341  31121779  31122128  31122738  31122892  31142825\n",
       " [442]  31143037  31144137  49245384  49247123  49248355  49252003  49253528\n",
       " [449]  49254625  49255445  49255705  49260721  49264218  49264509  49264791\n",
       " [456]  49265915  49267168  49270517  49271690  49273302  49276125  49278738\n",
       " [463]  49280088  49280607  49281198  49283527  49286745  49287433  49290174\n",
       " [470]  49291737  49299905  49301007  49301404  49301409  49304906  49313928\n",
       " [477]  49319961  49320217  49322238  49326191  49326378  49329551  49329709\n",
       " [484]  49331312  49333741  49334625  49341336        NA  49344008  49344147\n",
       " [491]  49350149  49350837  49351211  49353734  49355215  49355517  49359450\n",
       " [498]  49361940  49363104  49366218  49366751  49367059  49367080  49367200\n",
       " [505]  49370984  49372695  49373159  49373413  49376082  49377145  49377153\n",
       " [512]   5204969   5208703   5213084   5214511   5215656   5220182   5220566\n",
       " [519]   5232065   5233752   5235009   5235685   5236512   5236513   5237104\n",
       " [526]   5241401   5252624   5255419   5276551   5279135   5281172   5282070\n",
       " [533]   5286121   5290954   5293114   5293281   5295544   5296937   5313703\n",
       " [540]   5327572   5328117   5328323   5328907   5330522   5337649   5338555\n",
       " [547]   5339906   5340167   5341558   5342142   5342744   5342855   5343710\n",
       " [554]   5344437   5345387   5348376   5349219   5349516   5351138  58320645\n",
       " [561]  58326988  58331728  58332680  63422371  63423217  63423629  63426249\n",
       " [568]  63433046  63439030  63442863  63445344  63449082  63449256  63449428\n",
       " [575]  63451476  63452105  63458947  63460787  63466205  58522227  58540397\n",
       " [582]   1024107   1028150   1036315   1036457   1036469   1036576   1036632\n",
       " [589]   1036692   1036705   1036719   1036794   1036914   1037171   1037552\n",
       " [596]   1037564   1037585   1038863   1039324   1039411   1056493   1063444\n",
       " [603]  44834661  44848259  44862190  44864020  44888997  44893408  44906745\n",
       " [610]  44908684  44912456  44912678  44912921  44913484  44916825  44918903\n",
       " [617]  44919589  44919689  51224706  51225221  51227920        NA  51231768\n",
       " [624]  51233128  51233866  51234736  51235662  56404772  56405550  56407295\n",
       " [631]  56408019  56409084  56409712  56411218  56412160  56413016  56414777\n",
       " [638]  56420643  56422512  56423488  56428409  56430168  56434798  56437936\n",
       " [645]  56440110  56443204  56443413  56445501  56446519  56449045  56450321\n",
       " [652] 127133851 127135192 127135234 127136522 233115109 233116689 233117202\n",
       " [659]  57192122  57194056  57222778  11013198  11021175  11021619  11022058\n",
       " [666]  11022544  11023058  11023398  11023507  11024404  11025995  11026080\n",
       " [673]  11026145  11026190  11031512  11035790  11036832  11038666  11038782\n",
       " [680]  11039925  11628425  11660564  11664768  11665482  11666614  11668478\n",
       " [687]  11669558  11669562  11669981  11670115  11670618  11670704  11671260\n",
       " [694]  11673037  11673157  11673516  11673936  11674355  11674520  11676756\n",
       " [701]  11684907  11686086  11686590  11688694  11688960  11690676  11691437\n",
       " [708]  11692913  11693717  11694718  11696242  11697393  11698572  11698726\n",
       " [715]  11699482  11701377  11701760  11702946  11703089  11703960  11705723\n",
       " [722]  11706050  11707569  11707580  11707988  11708228  11708651  11708689\n",
       " [729]  11709308  11709499  11709608  11710572  11711188  11711994  11713299\n",
       " [736]  11714742  11715944  11716440  11716895  11717374  11717422  11717842\n",
       " [743]  11721611  11722635  11725315  11725947  11726456  11726513  11728692\n",
       " [750]  11735458  11735748  11750257  11750391  11750493  11750718  11751663\n",
       " [757]  11752802  11752951  11753027  11753129  11753334  11753419  11753667\n",
       " [764]  11753873  11754562  11755334  11755419  11755520  11755826  11756340\n",
       " [771]  11756400  11756447  11756898  11757269  11757322  11757718  11757801\n",
       " [778]  11757938  11757973  11757994  11758252  11758521  11758538  11759262\n",
       " [785]  11759365  11760355  11761284  11761905  11762285  11762484  11762674\n",
       " [792]  11763167  32593031  32593500  32593749  32597084  32597138  32597466\n",
       " [799]  32597552  32597636  32598030  32598077  32598531  32598621  32598756\n",
       " [806]  32598772  32598780  32598821        NA  32598858  32598909  32599132\n",
       " [813]  32599171  32599195  32599247  32599654  32599711  32599725  32599809\n",
       " [820]        NA  32600021  32600043  32600103  32600241  32600652  32600662\n",
       " [827]  32600694  32600745  32600761  32601779  32601882  32602013        NA\n",
       " [834]        NA  32602102  32602134  32602274  32602278  32602355  32602444\n",
       " [841]  32602451  32602461  32602504  32602534  32602548  32602576  32602598\n",
       " [848]  32602600  32602641  32602684  32602701        NA  32602773  32602794\n",
       " [855]  32602796  32602800  32602825  32602832  32602872  32602940  32602999\n",
       " [862]  32603020  32603023  32603032  32603062  32603062  32603062  32603072\n",
       " [869]  32603082  32603117  32603181  32603224  32603234  32603266  32603345\n",
       " [876]  32603424  32603450  32603994  32604068  32604185  32604302  32604305\n",
       " [883]  32604371  32604447  32604452  32604472  32604513  32604528  32604545\n",
       " [890]  32604549  32604611  32604611  32604611  32604674  32604770        NA\n",
       " [897]  32604882  32604918  32604924  32604980  32605029  32605074  32605118\n",
       " [904]  32605118  32605134  32605171  32605175  32605184  32605195  32605198\n",
       " [911]  32605250  32605262  32605263  32605281  32605638  32605657  32605665\n",
       " [918]  32605694  32605694  32605694  32605766  32605777  32605783  32605797\n",
       " [925]  32605821  32605844  32605936  32605971  32605977  32606003  32606196\n",
       " [932]  32606208  32606250  32606350  32606353  32606425  32606602  32606661\n",
       " [939]  32606825  32606826  32606847  32606851  32606872  32606875  32606899\n",
       " [946]  32606919  32606926  32607030  32607031  32607063  32607086  32607104\n",
       " [953]  32607118  32607177  32607217  32607272  32607322  32607488  32607498\n",
       " [960]  32607513  32607532  32607542  32607629  32607736  32607807  32607824\n",
       " [967]  32607854  32607897  32607924  32607972  32608026  32608072  32608075\n",
       " [974]  32608096  32608148  32608153  32608275  32608306  32608325  32608388\n",
       " [981]  32608398  32608400  32608470  32608505  32608519  32608570        NA\n",
       " [988]  32608649  32608662  32608701  32608701  32608701  32608716  32608763\n",
       " [995]  32608784  32608800  32608818  32608827  32608856  32608910  32608911\n",
       "[1002]  32608922  32609018  32609019  32609443  32609447  32609505  32609678\n",
       "[1009]  32609693  32609697  32609772  32609813  32609938  32609956  32610007\n",
       "[1016]  32610008  32610112  32610130  32610196  32610198  32610204  32610263\n",
       "[1023]  32610414  32610419  32610432  32610453  32610520  32610580  32610753\n",
       "[1030]  32610789  32610835  32610896  32610949  32610958  32610979  32610995\n",
       "[1037]  32611041  32611060  32611164  32611434  32611992  32612056  32612124\n",
       "[1044]        NA  32612163  32612174  32612307  32612335  32612380  32612464\n",
       "[1051]  32612511  32612567  32612580  32612667  32612669  32612679  32612730\n",
       "[1058]  32612840  32612964  32613103  32613725  32613963  32614196  32614412\n",
       "[1065]  32614873  32615250  32615322  32615580  32615752  32616916  32619573\n",
       "[1072]  32621638  32623436  32623811  32624232  40944149  40974457  41161514\n",
       "[1079]  47459545  47459875  47462031  47463548  47464901  47466015  47469961\n",
       "[1086]  47472829  47474135  47474418  47474641  47476070  47477281  47479305\n",
       "[1093]  47480600  47482882  47484147  47484534  47485642  47488382  47494177\n",
       "[1100]  47495390        NA  47497531  47501537  47505471  47507226  47507603\n",
       "[1107]  47511400  47511882  47512940  47513239  47514097  47515917  47517266\n",
       "[1114]  47517390  47519361  47520026  47521202  47521368  47521972  47526204\n",
       "[1121]  47527023  47534288  47535761  47537274  47543755        NA  47547022\n",
       "[1128]  47547894  47547927  47548075  47548633  47557466  47561028  47568708\n",
       "[1135]  47573679  47575128  47581759  47582793  47583708  47584125  47584202\n",
       "[1142]  47584444  47585081  47585666  47586441  47586732  47588894  47588898\n",
       "[1149]  47588944  47591715  47595179  47600960  47607596  47608631  47612921\n",
       "[1156]  47612959  47615928  47617370  47617879  47618176  47619313  47619558\n",
       "[1163]  47622368  47622740 100406823 100414711 100414956 100482234 100494172\n",
       "[1170] 143402014 143402040 143406388 143410495 143410783 143411065 143411748\n",
       "[1177] 143412046 143412115 146252937 100334426 100373690 100374211 100386466\n",
       "[1184] 100392741  27337604  27347529  27350609  27354393  27362470  27362793\n",
       "[1191]  27369273  27369936  27370037  27371149  27373120  27373302  27374501\n",
       "[1198]  27598736  27604964  27604964  27607002  27607412  27607795  27608640\n",
       "[1205]  27608664  27608798  27610169  27610304  27610986"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "hg38_positions"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 14,
   "metadata": {},
   "outputs": [],
   "source": [
    "snp_data[\"haploreg_hg38_pos\"] <- hg38_positions"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 15,
   "metadata": {},
   "outputs": [],
   "source": [
    "snp_data_relevant_columns <- subset(snp_data, select = c(\"CHR\",\"haploreg_hg38_pos\",\"LD_RSID\",\"REF\",\"ALT\") )"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 16,
   "metadata": {},
   "outputs": [],
   "source": [
    "write.table(snp_data_relevant_columns,\n",
    "            file = \"/projects/pfenninggroup/machineLearningForComputationalBiology/eramamur_stuff/ad_variants_processing/snigdha_snp_list_unique_haploreg_hg38_positions.txt\",\n",
    "            sep = \"\\t\",\n",
    "            quote = FALSE,\n",
    "            row.names=FALSE)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": []
  }
 ],
 "metadata": {
  "kernelspec": {
   "display_name": "R [conda env:r-3.6]",
   "language": "R",
   "name": "conda-env-r-3.6-r"
  },
  "language_info": {
   "codemirror_mode": "r",
   "file_extension": ".r",
   "mimetype": "text/x-r-source",
   "name": "R",
   "pygments_lexer": "r",
   "version": "3.6.3"
  }
 },
 "nbformat": 4,
 "nbformat_minor": 2
}