From aaae04c5809fd5887ecd69844781de8386163b72 Mon Sep 17 00:00:00 2001
From: GitHub Actions <actions@github.com>
Date: Tue, 13 Feb 2024 15:33:49 +0000
Subject: [PATCH] Built site for admiraltemplate: 0.0.3@83907c9

---
 404.html                               |  2 +-
 LICENSE.html                           |  2 +-
 articles/admiraltemplate.html          |  2 +-
 articles/adxx.html                     |  2 +-
 articles/index.html                    |  2 +-
 authors.html                           |  6 +++---
 index.html                             |  7 +++----
 news/index.html                        | 19 +++++++++++++++----
 pkgdown.yml                            |  2 +-
 pull_request_template.html             |  2 +-
 reference/admiraltemplate-package.html |  2 +-
 reference/hello_admiral.html           |  2 +-
 reference/index.html                   |  2 +-
 search.json                            |  2 +-
 14 files changed, 32 insertions(+), 22 deletions(-)

diff --git a/404.html b/404.html
index d793b7a..154978a 100644
--- a/404.html
+++ b/404.html
@@ -31,7 +31,7 @@
     
     <a class="navbar-brand me-2" href="https://pharmaverse.github.io/admiraltemplate/index.html">admiraltemplate</a>
 
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3.9000</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3</small>
 
     
     <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
diff --git a/LICENSE.html b/LICENSE.html
index e9f1cb4..6ff28e0 100644
--- a/LICENSE.html
+++ b/LICENSE.html
@@ -10,7 +10,7 @@
     
     <a class="navbar-brand me-2" href="index.html">admiraltemplate</a>
 
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3.9000</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3</small>
 
     
     <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
diff --git a/articles/admiraltemplate.html b/articles/admiraltemplate.html
index d0b88dc..f80f8e7 100644
--- a/articles/admiraltemplate.html
+++ b/articles/admiraltemplate.html
@@ -33,7 +33,7 @@
     
     <a class="navbar-brand me-2" href="../index.html">admiraltemplate</a>
 
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3.9000</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3</small>
 
     
     <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
diff --git a/articles/adxx.html b/articles/adxx.html
index 1ff5869..fafc937 100644
--- a/articles/adxx.html
+++ b/articles/adxx.html
@@ -33,7 +33,7 @@
     
     <a class="navbar-brand me-2" href="../index.html">admiraltemplate</a>
 
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3.9000</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3</small>
 
     
     <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
diff --git a/articles/index.html b/articles/index.html
index a896d1c..d295746 100644
--- a/articles/index.html
+++ b/articles/index.html
@@ -10,7 +10,7 @@
     
     <a class="navbar-brand me-2" href="../index.html">admiraltemplate</a>
 
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3.9000</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3</small>
 
     
     <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
diff --git a/authors.html b/authors.html
index b62146f..f876b90 100644
--- a/authors.html
+++ b/authors.html
@@ -10,7 +10,7 @@
     
     <a class="navbar-brand me-2" href="index.html">admiraltemplate</a>
 
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3.9000</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3</small>
 
     
     <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@@ -67,14 +67,14 @@ <h2 id="citation">Citation</h2>
 
       <p>Source O (2024).
 <em>admiraltemplate: ADaM in R Asset Library - Extension</em>.
-R package version 0.0.3.9000, 
+R package version 0.0.3, 
 https://github.com/pharmaverse/admiraltemplate, <a href="https://pharmaverse.github.io/admiraltemplate">https://pharmaverse.github.io/admiraltemplate</a>. 
 </p>
       <pre>@Manual{,
   title = {admiraltemplate: ADaM in R Asset Library - Extension},
   author = {Open Source},
   year = {2024},
-  note = {R package version 0.0.3.9000, 
+  note = {R package version 0.0.3, 
 https://github.com/pharmaverse/admiraltemplate},
   url = {https://pharmaverse.github.io/admiraltemplate},
 }</pre>
diff --git a/index.html b/index.html
index dd70e75..12f5b6f 100644
--- a/index.html
+++ b/index.html
@@ -47,7 +47,7 @@
     
     <a class="navbar-brand me-2" href="index.html">admiraltemplate</a>
 
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3.9000</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3</small>
 
     
     <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@@ -114,8 +114,7 @@ <h2 id="extension-expectations">Extension Expectations<a class="anchor" aria-lab
 <ul>
 <li><a href="https://pharmaverse.github.io/admiral/CODE_OF_CONDUCT.html" class="external-link">Code of Conduct</a></li>
 <li><a href="https://pharmaverse.github.io/admiral/index.html?q=manifest#admiral-manifesto" class="external-link">Manifesto</a></li>
-<li><a href="https://pharmaverse.github.io/admiraldev/main/articles/programming_strategy.html" class="external-link">Programming Strategy</a></li>
-<li><a href="https://pharmaverse.github.io/admiraldev/main/articles/development_process.html" class="external-link">Development Process</a></li>
+<li><a href="https://pharmaverse.github.io/admiraldev/articles/programming_strategy.html" class="external-link">Programming Strategy</a></li>
 <li>Follow consistent workflow checks</li>
 <li>A CRAN Release means 90% or greater test coverage</li>
 </ul>
@@ -139,7 +138,7 @@ <h2 id="what-is-included-in-the-template">What is included in the template<a cla
 <div class="section level2">
 <h2 id="package-extension-guidance">Package Extension Guidance<a class="anchor" aria-label="anchor" href="#package-extension-guidance"></a>
 </h2>
-<p>For detailed information regarding the ethos of <a href="https://pharmaverse.github.io/admiral/" class="external-link">admiral</a> package extensions and how to decide if you should set your own one up, please see our <a href="https://pharmaverse.github.io/admiraldev/main/articles/package_extensions.html" class="external-link">Package Extension Guidance</a>. You will also find details about team setup, suggested workflow and lessons learned from past package extensions.</p>
+<p>For detailed information regarding the ethos of <a href="https://pharmaverse.github.io/admiral/" class="external-link">admiral</a> package extensions and how to decide if you should set your own one up, please see our <a href="https://pharmaverse.github.io/admiraldev/articles/package_extensions.html" class="external-link">Package Extension Guidance</a>. You will also find details about team setup, suggested workflow and lessons learned from past package extensions.</p>
 </div>
 </div>
   </main><aside class="col-md-3"><div class="links">
diff --git a/news/index.html b/news/index.html
index e02512a..463186a 100644
--- a/news/index.html
+++ b/news/index.html
@@ -10,7 +10,7 @@
     
     <a class="navbar-brand me-2" href="../index.html">admiraltemplate</a>
 
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3.9000</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3</small>
 
     
     <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@@ -54,11 +54,22 @@
     </div>
 
     <div class="section level2">
-<h2 class="pkg-version" data-toc-text="0.0.3.9000" id="admiraltemplate-0039000">admiraltemplate 0.0.3.9000<a class="anchor" aria-label="anchor" href="#admiraltemplate-0039000"></a></h2>
+<h2 class="pkg-version" data-toc-text="0.0.3" id="admiraltemplate-003">admiraltemplate 0.0.3<a class="anchor" aria-label="anchor" href="#admiraltemplate-003"></a></h2>
 <ul><li>Removed renv and related files (<a href="https://github.com/pharmaverse/admiraltemplate/issues/70" class="external-link">#70</a>)</li>
 </ul><div class="section level3">
-<h3 id="updates-to-site-0-0-3-9000">Updates to site<a class="anchor" aria-label="anchor" href="#updates-to-site-0-0-3-9000"></a></h3>
-<ul><li>Package Extension guidance on the front page was updated and moved to <a href="https://pharmaverse.github.io/admiraldev/main/articles/package_extensions.html" class="external-link">this location</a> in <a href="https://pharmaverse.github.io/admiraldev/" class="external-link">admiraldev</a>, and a link was added to point to the new location (<a href="https://github.com/pharmaverse/admiraltemplate/issues/61" class="external-link">#61</a>).</li>
+<h3 id="updates-to-site-0-0-3">Updates to site<a class="anchor" aria-label="anchor" href="#updates-to-site-0-0-3"></a></h3>
+<ul><li>Package Extension guidance on the front page was updated and moved to <a href="https://pharmaverse.github.io/admiraldev/articles/package_extensions.html" class="external-link">this location</a> in <a href="https://pharmaverse.github.io/admiraldev/" class="external-link">admiraldev</a>, and a link was added to point to the new location (<a href="https://github.com/pharmaverse/admiraltemplate/issues/61" class="external-link">#61</a>).</li>
+</ul></div>
+<div class="section level3">
+<h3 id="ci-workflows-0-0-3">CI workflows<a class="anchor" aria-label="anchor" href="#ci-workflows-0-0-3"></a></h3>
+<ul><li>
+<a href="https://github.com/pharmaverse/admiralci" class="external-link"><code>admiralci</code> workflows</a> has been updated. Indeed, workflows are not anymore based on <code>renv</code> framework to manage dependencies (<code>devtools</code> is used instead). Moreover, we now use latest version of <code>R</code> for all workflows, and run <code>R CMD CHECKS</code> for following R release version (R latest stable version), R devel version (in development version), and R previous release. More details are available in <a href="https://pharmaverse.github.io/admiralci/index.html" class="external-link">admiralci doc</a>. As a result, <code>.github/workflows/common.yml</code> file has been updated, and all <code>renv</code> configurations has been removed.</li>
+</ul></div>
+<div class="section level3">
+<h3 id="admiraltest-removed-0-0-3">admiral.test removed<a class="anchor" aria-label="anchor" href="#admiraltest-removed-0-0-3"></a></h3>
+<ul><li>
+<code>admiral.test</code> package has been replaced by <a href="https://github.com/pharmaverse/pharmaversesdtm" class="external-link"><code>pharmaversesdtm</code></a>
+</li>
 </ul></div>
 </div>
     <div class="section level2">
diff --git a/pkgdown.yml b/pkgdown.yml
index 2029b04..4c35fcd 100644
--- a/pkgdown.yml
+++ b/pkgdown.yml
@@ -4,7 +4,7 @@ pkgdown_sha: ~
 articles:
   admiraltemplate: admiraltemplate.html
   adxx: adxx.html
-last_built: 2024-02-12T18:17Z
+last_built: 2024-02-13T15:33Z
 urls:
   reference: https://pharmaverse.github.io/admiraltemplate/reference
   article: https://pharmaverse.github.io/admiraltemplate/articles
diff --git a/pull_request_template.html b/pull_request_template.html
index 3694a0c..5229912 100644
--- a/pull_request_template.html
+++ b/pull_request_template.html
@@ -10,7 +10,7 @@
     
     <a class="navbar-brand me-2" href="index.html">admiraltemplate</a>
 
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3.9000</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3</small>
 
     
     <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
diff --git a/reference/admiraltemplate-package.html b/reference/admiraltemplate-package.html
index ef4db5e..a4951de 100644
--- a/reference/admiraltemplate-package.html
+++ b/reference/admiraltemplate-package.html
@@ -12,7 +12,7 @@
     
     <a class="navbar-brand me-2" href="../index.html">admiraltemplate</a>
 
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3.9000</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3</small>
 
     
     <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
diff --git a/reference/hello_admiral.html b/reference/hello_admiral.html
index 5e0113e..7f09de0 100644
--- a/reference/hello_admiral.html
+++ b/reference/hello_admiral.html
@@ -10,7 +10,7 @@
     
     <a class="navbar-brand me-2" href="../index.html">admiraltemplate</a>
 
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3.9000</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3</small>
 
     
     <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
diff --git a/reference/index.html b/reference/index.html
index e7adb8d..b6ff11a 100644
--- a/reference/index.html
+++ b/reference/index.html
@@ -10,7 +10,7 @@
     
     <a class="navbar-brand me-2" href="../index.html">admiraltemplate</a>
 
-    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3.9000</small>
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.0.3</small>
 
     
     <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
diff --git a/search.json b/search.json
index cce37d2..3b0104b 100644
--- a/search.json
+++ b/search.json
@@ -1 +1 @@
-[{"path":"https://pharmaverse.github.io/admiraltemplate/LICENSE.html","id":null,"dir":"","previous_headings":"","what":"Apache License","title":"Apache License","text":"Version 2.0, January 2004 <http://www.apache.org/licenses/>","code":""},{"path":[]},{"path":"https://pharmaverse.github.io/admiraltemplate/LICENSE.html","id":"id_1-definitions","dir":"","previous_headings":"Terms and Conditions for use, reproduction, and distribution","what":"1. Definitions","title":"Apache License","text":"“License” shall mean terms conditions use, reproduction, distribution defined Sections 1 9 document. “Licensor” shall mean copyright owner entity authorized copyright owner granting License. “Legal Entity” shall mean union acting entity entities control, controlled , common control entity. purposes definition, “control” means () power, direct indirect, cause direction management entity, whether contract otherwise, (ii) ownership fifty percent (50%) outstanding shares, (iii) beneficial ownership entity. “” (“”) shall mean individual Legal Entity exercising permissions granted License. “Source” form shall mean preferred form making modifications, including limited software source code, documentation source, configuration files. “Object” form shall mean form resulting mechanical transformation translation Source form, including limited compiled object code, generated documentation, conversions media types. “Work” shall mean work authorship, whether Source Object form, made available License, indicated copyright notice included attached work (example provided Appendix ). “Derivative Works” shall mean work, whether Source Object form, based (derived ) Work editorial revisions, annotations, elaborations, modifications represent, whole, original work authorship. purposes License, Derivative Works shall include works remain separable , merely link (bind name) interfaces , Work Derivative Works thereof. “Contribution” shall mean work authorship, including original version Work modifications additions Work Derivative Works thereof, intentionally submitted Licensor inclusion Work copyright owner individual Legal Entity authorized submit behalf copyright owner. purposes definition, “submitted” means form electronic, verbal, written communication sent Licensor representatives, including limited communication electronic mailing lists, source code control systems, issue tracking systems managed , behalf , Licensor purpose discussing improving Work, excluding communication conspicuously marked otherwise designated writing copyright owner “Contribution.” “Contributor” shall mean Licensor individual Legal Entity behalf Contribution received Licensor subsequently incorporated within Work.","code":""},{"path":"https://pharmaverse.github.io/admiraltemplate/LICENSE.html","id":"id_2-grant-of-copyright-license","dir":"","previous_headings":"Terms and Conditions for use, reproduction, and distribution","what":"2. 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