From b46307bcf467c421472f22fa85d8994300cb3570 Mon Sep 17 00:00:00 2001
From: Kangjie Zhang <47867131+kaz462@users.noreply.github.com>
Date: Fri, 3 May 2024 13:35:45 -0700
Subject: [PATCH] copy common.yml from admiral (#62)

* copy common.yml from admiral

* update RoxygenNote
---
 .github/workflows/common.yml | 38 ++++++++++++++----------------------
 DESCRIPTION                  |  2 +-
 2 files changed, 16 insertions(+), 24 deletions(-)

diff --git a/.github/workflows/common.yml b/.github/workflows/common.yml
index fbf4fe1..834ed5d 100644
--- a/.github/workflows/common.yml
+++ b/.github/workflows/common.yml
@@ -15,14 +15,12 @@ on:
       - "v*"
     branches:
       - main
-      - devel
       - patch
   # 'pull_request' events are triggered when PRs are
   # created against one of these target branches.
   pull_request:
     branches:
       - main
-      - devel
       - patch
   # 'release' events are triggered when...
   # you guessed it - when releases are made.
@@ -36,8 +34,8 @@ concurrency:
   cancel-in-progress: true
 
 env:
-  R_VERSION: "4.1"
-  
+  R_VERSION: "release"
+
 jobs:
   get_r_version:
     name: Get R version
@@ -63,13 +61,6 @@ jobs:
     needs: get_r_version
     with:
       r-version: "${{ needs.get_r_version.outputs.r-version }}"
-  readme:
-    name: Render README
-    uses: pharmaverse/admiralci/.github/workflows/readme-render.yml@main
-    if: github.event_name == 'push'
-    needs: get_r_version
-    with:
-      r-version: "${{ needs.get_r_version.outputs.r-version }}"
   validation:
     name: Validation
     uses: pharmaverse/admiralci/.github/workflows/r-pkg-validation.yml@main
@@ -80,29 +71,24 @@ jobs:
   check:
     name: Check
     uses: pharmaverse/admiralci/.github/workflows/r-cmd-check.yml@main
-    if: github.event_name == 'pull_request'
     with:
-      error-on: error
+      error-on: warning # TODO: find a way to ignore specific notes
+    if: github.event_name == 'pull_request'
   docs:
     name: Documentation
     uses: pharmaverse/admiralci/.github/workflows/pkgdown.yml@main
     if: github.event_name == 'push' || startsWith(github.ref, 'refs/tags/v')
     needs: get_r_version
     with:
-      r-version: "${{ needs.get_r_version.outputs.r-version }}"
-      # Whether to skip multiversion docs
-      # Note that if you have multiple versions of docs,
-      # your URL links are likely to break due to path changes
-      skip-multiversion-docs: false
-      latest-tag-alt-name: cran-release
-      multiversion-docs-landing-page: cran-release
-      branches-or-tags-to-list: >-
-        ^cran-release$|^main$|^v([0-9]+\\.)?([0-9]+\\.)?([0-9]+)$
+      r-version: "release"
+      skip-multiversion-docs: true
+    secrets:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
   linter:
     name: Lint
     uses: pharmaverse/admiralci/.github/workflows/lintr.yml@main
-    if: github.event_name == 'pull_request'
     needs: get_r_version
+    if: github.event_name == 'pull_request'
     with:
       r-version: "${{ needs.get_r_version.outputs.r-version }}"
   links:
@@ -136,3 +122,9 @@ jobs:
     needs: get_r_version
     with:
       r-version: "${{ needs.get_r_version.outputs.r-version }}"
+  vbump:
+    name: Version Bump 🤜🤛
+    if: github.event_name == 'push'
+    uses: insightsengineering/r.pkg.template/.github/workflows/version-bump.yaml@main
+    secrets:
+      REPO_GITHUB_TOKEN: ${{ secrets.PHARMAVERSE_BOT }}
diff --git a/DESCRIPTION b/DESCRIPTION
index 97020e0..0c647f0 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -22,7 +22,7 @@ Language: en-US
 LazyData: true
 LazyDataCompression: bzip2
 Roxygen: list(markdown = TRUE)
-RoxygenNote: 7.2.3
+RoxygenNote: 7.3.1
 Depends: R (>= 3.5)
 Imports:
 Suggests: