ganon version 0.3.2

• fix bug on reporting unique matches with multiple databases
• remove unnecessary defaultdict usage
• exit code 0 on successful runs
• check if paired reads are valid and files not empty
• avoid error on report if nothing was classified

ganon version 0.3.1

Bug fix on warning and verbose mode

ganon version 0.3.0

• support for update-complete: adding and removing sequences updating ganon database
• uses taxsbp version 1.0.0 as python module
• better estimation of filter trade-off size/number of bins
• ganon as python module
• extended test cases for build and update
• many code improvements and bug fixes

ganon version 0.2.3

• bug fixes
• improved testing
• report by taxid
• xcode on travis

ganon version 0.2.2

• bug fixes
• refactored lca code
• removed "v" from tag release

ganon version 0.2.1

• bug fixes
• code improvements
• control over strata filter

ganon version 0.2.0

• lca on c++ side
• new database formats
• ganon report
• fix bug offset seqan, new calculations (slightly different results using offset > 1)
• code improvement and bug fixes

ganon version 0.1.5

• support paired reads
• support any alphabet (anything not ACTG will be converted to N)
• support folder as input
• quiet mode
• general bug-fixes

ganon version 0.1.4

• use of pylca package
• improvements in speed of LCA
• change defaults
• general fixes

ganon version 0.1.3

• travis compilation test with gcc7, gcc8, gcc9, clang-7 and clang-8 thanks to @benvenutti
• path to the binaries and scripts with shutil.which
• --max-bloom-size option to estimate best --bin-length based on user input size
• auxiliary Time is now StopClock
• python wrapper integrated to the project folders
• first tests added for the python code (unit and integration)
• osx complete support
• integration taxsbp 0.1.2
• do not force sse4_2