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pointnet_archaeological_detection.py
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import tensorflow as tf
import numpy as np
import math
import os
import sys
BASE_DIR = os.path.dirname(os.path.abspath(__file__))
sys.path.append(os.path.dirname(BASE_DIR))
sys.path.append(os.path.join(BASE_DIR, '../utils'))
from utils import tf_util
def get_transform_K(inputs, is_training, bn_decay=None, K = 3):
""" Transform Net, input is BxNx1xK gray image
Return:
Transformation matrix of size KxK """
batch_size = inputs.get_shape()[0].value
num_point = inputs.get_shape()[1].value
net = tf_util.conv2d(inputs, 256, [1,1], padding='VALID', stride=[1,1],
bn=True, is_training=is_training, scope='tconv1', bn_decay=bn_decay)
net = tf_util.conv2d(net, 1024, [1,1], padding='VALID', stride=[1,1],
bn=True, is_training=is_training, scope='tconv2', bn_decay=bn_decay)
net = tf_util.max_pool2d(net, [num_point,1], padding='VALID', scope='tmaxpool')
net = tf.reshape(net, [batch_size, -1])
net = tf_util.fully_connected(net, 512, bn=True, is_training=is_training, scope='tfc1', bn_decay=bn_decay)
net = tf_util.fully_connected(net, 256, bn=True, is_training=is_training, scope='tfc2', bn_decay=bn_decay)
with tf.variable_scope('transform_feat') as sc:
weights = tf.get_variable('weights', [256, K*K], initializer=tf.constant_initializer(0.0), dtype=tf.float32)
biases = tf.get_variable('biases', [K*K], initializer=tf.constant_initializer(0.0), dtype=tf.float32) + tf.constant(np.eye(K).flatten(), dtype=tf.float32)
transform = tf.matmul(net, weights)
transform = tf.nn.bias_add(transform, biases)
#transform = tf_util.fully_connected(net, 3*K, activation_fn=None, scope='tfc3')
transform = tf.reshape(transform, [batch_size, K, K])
return transform
def get_transform(point_cloud, is_training, bn_decay=None, K = 3):
""" Transform Net, input is BxNx3 gray image
Return:
Transformation matrix of size 3xK """
batch_size = point_cloud.get_shape()[0].value
num_point = point_cloud.get_shape()[1].value
input_image = tf.expand_dims(point_cloud, -1)
net = tf_util.conv2d(input_image, 64, [1,3], padding='VALID', stride=[1,1],
bn=True, is_training=is_training, scope='tconv1', bn_decay=bn_decay)
net = tf_util.conv2d(net, 128, [1,1], padding='VALID', stride=[1,1],
bn=True, is_training=is_training, scope='tconv3', bn_decay=bn_decay)
net = tf_util.conv2d(net, 1024, [1,1], padding='VALID', stride=[1,1],
bn=True, is_training=is_training, scope='tconv4', bn_decay=bn_decay)
net = tf_util.max_pool2d(net, [num_point,1], padding='VALID', scope='tmaxpool')
net = tf.reshape(net, [batch_size, -1])
net = tf_util.fully_connected(net, 128, bn=True, is_training=is_training, scope='tfc1', bn_decay=bn_decay)
net = tf_util.fully_connected(net, 128, bn=True, is_training=is_training, scope='tfc2', bn_decay=bn_decay)
with tf.variable_scope('transform_XYZ') as sc:
assert(K==3)
weights = tf.get_variable('weights', [128, 3*K], initializer=tf.constant_initializer(0.0), dtype=tf.float32)
biases = tf.get_variable('biases', [3*K], initializer=tf.constant_initializer(0.0), dtype=tf.float32) + tf.constant([1,0,0,0,1,0,0,0,1], dtype=tf.float32)
transform = tf.matmul(net, weights)
transform = tf.nn.bias_add(transform, biases)
#transform = tf_util.fully_connected(net, 3*K, activation_fn=None, scope='tfc3')
transform = tf.reshape(transform, [batch_size, 3, K])
return transform
def get_model(point_cloud, is_training, part_num, batch_size, \
num_point, weight_decay, bn_decay=None):
""" ConvNet baseline, input is BxNx3 gray image """
end_points = {}
with tf.variable_scope('transform_net1') as sc:
K = 3
transform = get_transform(point_cloud, is_training, bn_decay, K = 3)
point_cloud_transformed = tf.matmul(point_cloud, transform)
input_image = tf.expand_dims(point_cloud_transformed, -1)
out1 = tf_util.conv2d(input_image, 64, [1,K], padding='VALID', stride=[1,1],
bn=True, is_training=is_training, scope='conv1', bn_decay=bn_decay)
out2 = tf_util.conv2d(out1, 128, [1,1], padding='VALID', stride=[1,1],
bn=True, is_training=is_training, scope='conv2', bn_decay=bn_decay)
out3 = tf_util.conv2d(out2, 128, [1,1], padding='VALID', stride=[1,1],
bn=True, is_training=is_training, scope='conv3', bn_decay=bn_decay)
with tf.variable_scope('transform_net2') as sc:
K = 128
transform = get_transform_K(out3, is_training, bn_decay, K)
end_points['transform'] = transform
squeezed_out3 = tf.reshape(out3, [batch_size, num_point, 128])
net_transformed = tf.matmul(squeezed_out3, transform)
net_transformed = tf.expand_dims(net_transformed, [2])
out4 = tf_util.conv2d(net_transformed, 512, [1,1], padding='VALID', stride=[1,1],
bn=True, is_training=is_training, scope='conv4', bn_decay=bn_decay)
out5 = tf_util.conv2d(out4, 2048, [1,1], padding='VALID', stride=[1,1],
bn=True, is_training=is_training, scope='conv5', bn_decay=bn_decay)
out_max = tf_util.max_pool2d(out5, [num_point,1], padding='VALID', scope='maxpool')
expand = tf.tile(out_max, [1, num_point, 1, 1])
concat = tf.concat(axis=3, values=[expand, out1, out2, out3, out4, out5])
net = tf_util.conv2d(concat, 256, [1,1], padding='VALID', stride=[1,1], bn_decay=bn_decay,
bn=True, is_training=is_training, scope='seg/conv1', weight_decay=weight_decay)
net = tf_util.dropout(net, keep_prob=0.8, is_training=is_training, scope='seg/dp1')
net = tf_util.conv2d(net, 256, [1,1], padding='VALID', stride=[1,1], bn_decay=bn_decay,
bn=True, is_training=is_training, scope='seg/conv2', weight_decay=weight_decay)
net = tf_util.dropout(net, keep_prob=0.8, is_training=is_training, scope='seg/dp2')
net = tf_util.conv2d(net, 128, [1,1], padding='VALID', stride=[1,1], bn_decay=bn_decay,
bn=True, is_training=is_training, scope='seg/conv3', weight_decay=weight_decay)
net = tf_util.conv2d(net, part_num, [1,1], padding='VALID', stride=[1,1], activation_fn=None,
bn=False, scope='seg/conv4', weight_decay=weight_decay)
net = tf.reshape(net, [batch_size, num_point, part_num])
return net, end_points
def get_loss(seg_pred, seg, weight, end_points):
# size of seg_pred is batch_size x point_num x part_cat_num
# size of seg is batch_size x point_num
class_weights = tf.constant([0.1, 0.15, 0.2, 0.25, 0.30, 0.35, 0.4, 0.45, 0.5, 0,55, 0.6, 0.65])
weights = tf.gather(class_weights, seg)
per_instance_seg_loss = tf.reduce_mean(tf.nn.sparse_softmax_cross_entropy_with_logits(logits=seg_pred, labels=seg) * weights, axis=1)
seg_loss = tf.reduce_mean(per_instance_seg_loss)
per_instance_seg_pred_res = tf.argmax(seg_pred, 2)
# Enforce the transformation as orthogonal matrix
transform = end_points['transform'] # BxKxK
K = transform.get_shape()[1].value
mat_diff = tf.matmul(transform, tf.transpose(transform, perm=[0,2,1])) - tf.constant(np.eye(K), dtype=tf.float32)
mat_diff_loss = tf.nn.l2_loss(mat_diff)
total_loss = weight * seg_loss + mat_diff_loss * 1e-3
return total_loss, seg_loss, per_instance_seg_loss, per_instance_seg_pred_res