Tracking Issue: Codebase Cleanup

[protocol-1903]

Goal

In this issue I plan on writing a bunch of things that I would like to work on eventually to make the codebase generally more sane, clean, and nicer to work around in and use.

Feedback

Feedback is welcomed by everyone.

Checklist guide

#1076

Emoji	Description
Nothing	I want to do it
❗	I want to discuss with pydevs about if it will be good/okay
⚠	Potentially I will do

Checklist of Issues

• Rename ree to raw-earth-ore
• Unify all big rock names to be named <resource>-rock
  • sulfur-patch -> sulfer-rock
  • regolites - regolite-rock
  • ⚠ bitumin-seep -> bitumen-seep-rock
  • rare-earth-bolide-> rare-earth-rock
  • ⚠ geothermal-crack -> geothermal-crack-rock
  • ⚠ volcanic-pipe -> volcanic-pipe-rock
• Unify all resource patches to be named <resource>-ore
  • ore-zinc -> zinc ore
  • ore-lead -> lead-ore
  • raw-coal -> raw-coal-ore
  • ore-titanium -> titanium-ore
  • ore-quartz -> quartz-ore
  • ore-nickel -> nickel-ore
  • borax -> borax-ore
  • niobium -> niobium-ore
  • ore-chromium -> chromium-ore
  • oil-sand -> oil-sands-ore
• ❗ Split up item.lua files by each item's subgroup. (might need to clean up subgroups first)
• Clean up subgroups
  • I want to do it like this or some other better method, I am very open to suggestions.
• Reduce all warnings to zero than make it error instead of just warn.
• Rename dirty-water-light -> muddy-sludge
• Rename nmf-mk0x -> nanomaterial-factory-mk0x
  • Rename nmf to nanomaterial-factory as well.
• Scrondrix -> scrondrix
• Move turd icons into pyalienlife instead of pycoalprocessing
• Moving some library code from pycoalprocessing and other lower dependencies to pypostprocessing
• Normalize the -farm and -habitat suffix internally
• Normalize mk01-mk04 items to always be thing-mk0x internally
• Turds more extensible
  • Pick a new turd outside of alien life
  • Create new turds outside of alien life
• Testing code in pypostprocessing/tests/ reworks
  • Write the code in stages to be able to do multi-stage tests
  • Add tests for things that often break (suggestions needed)

[protocol-1903]

Todo: replace instances of hidden and hidden_in_factoriopedia with metas:hide() and metas:unhide()

[protocol-1903]

#1275 (comment)