v0.1 #232

tkoyama010 announced in Announcements

tkoyama010
Apr 4, 2024
Maintainer

What's Changed

New Features

Add tutorial to show how to use pyvista-gmsh which is inspired by gmsh tutorial by @tkoyama010 in Add tutorial to show how to use pyvista-gmsh which is inspired by gmsh tutorial #1
Add delaunay_3d function to generate 3D mesh by @tkoyama010 in Add delaunay_3d function to generate 3D mesh #23
Support list in target_sizes to set each point by @tkoyama010 in Support list in target_sizes to set each point #138
Add Plotter class plotting object to display mesh by @tkoyama010 in Add Plotter class plotting object to display mesh #188
Add PolyData class to represent geometry object by @tkoyama010 in Add PolyData class to represent geometry object #198

Bug fixes or behavior changes

Fix bug of point index by @tkoyama010 in Fix bug of point index #4
Avoid opening temporary files twice by @tkoyama010 in Avoid opening temporary files twice #38
Fix frontal_delaunay_2d to return PolyData by @tkoyama010 in Fix frontal_delaunay_2d to return PolyData #45
Use initial 2d mesh only in delaunay_3d by @tkoyama010 in Use initial 2d mesh only in delaunay_3d #60

Documentation

Create LICENSE by @tkoyama010 in Create LICENSE #9
Use PyVista's delaunay_2d example to compare with PyVista by @tkoyama010 in Use PyVista's delaunay_2d example to compare with PyVista #10
Add README.rst to explain project goal by @tkoyama010 in Add README.rst to explain project goal #14
Improve design of mesh which is inspired by pygmsh by @tkoyama010 in Improve design of mesh which is inspired by pygmsh #16
Update README.rst to add motivation by @tkoyama010 in Update README.rst to add motivation #18
Update README.rst to fix url of reference by @tkoyama010 in Update README.rst to fix url of reference #19
Create CODE_OF_CONDUCT.md by @tkoyama010 in Create CODE_OF_CONDUCT.md #20
Update README.rst to update expression more effective by @tkoyama010 in Update README.rst to update expression more effective #21
Revert "Create LICENSE" by @tkoyama010 in Revert "Create LICENSE" #25
Create GPL LICENSE to use Gmsh by @tkoyama010 in Create GPL LICENSE to use Gmsh #26
Update README.rst to show the reference more explicit by @tkoyama010 in Update README.rst to show the reference more explicit #35
Update README.rst to add title by @tkoyama010 in Update README.rst to add title #47
Update README.rst to remove unused option in usage by @tkoyama010 in Update README.rst to remove unused option in usage #48
Fix frontal_delaunay_2d to return PolyData in docstring by @tkoyama010 in Fix frontal_delaunay_2d to return PolyData in docstring #49
Add logo mark of pvgmsh by @tkoyama010 in Add logo mark of pvgmsh #50
Add title to PVGmsh logo icon by @tkoyama010 in Add title to PVGmsh logo icon #51
Use markdown in README by @tkoyama010 in Use markdown in README #52
Fix the color of edge source from blue to red by @tkoyama010 in Fix the color of edge source from blue to red #53
Clean PVGmsh logo position value and information by @tkoyama010 in Clean PVGmsh logo position value and information #55
Add LICENSE of Super Flat Remix V1.08 Apps by @tkoyama010 in Add LICENSE of Super Flat Remix V1.08 Apps #57
Update __init__.py to fix typo in docstring by @tkoyama010 in Update __init__.py to fix typo in docstring #58
Update README.md to add 3D mesh generation example by @tkoyama010 in Update README.md to add 3D mesh generation example #61
Fix the output using lightning off in README.md by @tkoyama010 in Fix the output using lightning off in README.md #63
Aligning 2D and 3D mesh designs in README.md by @tkoyama010 in Aligning 2D and 3D mesh designs in README.md #64
Update the width of the logo from 500px to 600px by @tkoyama010 in Update the width of the logo from 500px to 600px #65
Update pvgmsh_logo_icon.svg to fix font size from 130ptx to 100ptx by @tkoyama010 in Update pvgmsh_logo_icon.svg to fix font size from 130ptx to 100ptx #66
Remove shrink filter to represent output mesh by @tkoyama010 in Remove shrink filter to represent output mesh #67
Remove prompt of the interactive Python interpreter by @tkoyama010 in Remove prompt of the interactive Python interpreter #68
Fix the line width of the edge source geometry by @tkoyama010 in Fix the line width of the edge source geometry #69
Add axes to figures to make explicit if 2D or 3D by @tkoyama010 in Add axes to figures to make explicit if 2D or 3D #73
Update README.md to hide code of 3D mesh by @tkoyama010 in Update README.md to hide code of 3D mesh #74
Update README.md to hide code of 2D mesh plot by @tkoyama010 in Update README.md to hide code of 2D mesh plot #75
Add legend in figure to represent source and mesh by @tkoyama010 in Add legend in figure to represent source and mesh #76
Show how to generate 3D mesh in README.md default by @tkoyama010 in Show how to generate 3D mesh in README.md default #77
Add pre-commit.ci status badges to check status by @tkoyama010 in Add pre-commit.ci status badges to check status #88
Fix output figure design inspired by meshplex logo by @tkoyama010 in Fix output figure design inspired by meshplex logo #89
Fix width size of the image to show it more small by @tkoyama010 in Fix width size of the image to show it more small #92
Change project name in logo from PVGmsh to pvgmsh by @tkoyama010 in Change project name in logo from PVGmsh to pvgmsh #94
Fix the height of the logo from 600px to 800px by @tkoyama010 in Fix the height of the logo from 600px to 800px #95
Fix legend name to explicit name edge source by @tkoyama010 in Fix legend name to explicit name edge source #96
Fix the size of the legend to make more effective by @tkoyama010 in Fix the size of the legend to make more effective #101
Fix the target size of the 3D mesh to make it effective by @tkoyama010 in Fix the target size of the 3D mesh to make it effective #100
Add a badge in README to represent the license by @tkoyama010 in Add a badge in README to represent the license #102
Add a badge in README to represent the type of COC by @tkoyama010 in Add a badge in README to represent the type of COC #105
Add a GitHub Repo stars badge to show star number by @tkoyama010 in Add a GitHub Repo stars badge to show star number #110
Fix the error of the link which goes to other project by @tkoyama010 in Fix the error of the link which goes to other project #112
Fix the error of the link which goes to other project by @tkoyama010 in Fix the error of the link which goes to other project #121
Add installation section to show how to install by @tkoyama010 in Add installation section to show how to install #120
Add an authors section to show who is contributing by @tkoyama010 in Add an authors section to show who is contributing #122
Add a section in README to represent the license by @tkoyama010 in Add a section in README to represent the license #123
Add constructive solid geometry (CSG) figure image by @tkoyama010 in Add constructive solid geometry (CSG) figure image #136
Move image from root to _static path for images by @tkoyama010 in Move image from root to _static path for images #137
Refactoring .pre-commit-config.yaml sorting by ID by @tkoyama010 in Refactoring .pre-commit-config.yaml sorting by ID #135
Change csg figure path and add section of generate by @tkoyama010 in Change csg figure path and add section of generate #140
Fix emoji encoding to show in PyPI readme by @tkoyama010 in Fix emoji encoding to show in PyPI readme #141
Update pvgmsh_logo_icon.svg to make bolden the logo brackets by @tkoyama010 in Update pvgmsh_logo_icon.svg to make bolden the logo brackets #142
Add doc-toc to .pre-commit-config.yaml to make TOC by @tkoyama010 in Add doc-toc to .pre-commit-config.yaml to make TOC #143
Includes a project logo/illustration whenever possible by @tkoyama010 in Includes a project logo/illustration whenever possible #144
Add section title of Table of Contents to split by @tkoyama010 in Add section title of Table of Contents to split #145
Fix layout of badge to the underline of the title by @tkoyama010 in Fix layout of badge to the underline of the title #147
Change sentence and layout of description better by @tkoyama010 in Change sentence and layout of description better #148
Add a support sentence in README.md to share more by @tkoyama010 in Add a support sentence in README.md to share more #150
Update README.md to fix the layout of the figure by @tkoyama010 in Update README.md to fix the layout of the figure #151
Revert "Update README.md to fix the layout of the figure" by @tkoyama010 in Revert "Update README.md to fix the layout of the figure" #152
Update documentation theme to sphinx-book-theme by @tkoyama010 in Update documentation theme to sphinx-book-theme #154
Add SECURITY.md to show supported Python versions by @tkoyama010 in Add SECURITY.md to show supported Python versions #158
Create CONTRIBUTING.rst to explain about contribution by @tkoyama010 in Create CONTRIBUTING.rst to explain about contribution #160
Add reporting a vulnerability section to explain by @tkoyama010 in Add reporting a vulnerability section to explain #161
Add small_logo.svg to fix layout of the document by @tkoyama010 in Add small_logo.svg to fix layout of the document #163
Add a clipping example for analyzing the mesh by @tkoyama010 in Add a clipping example for analyzing the mesh #166
Add under construction indicate mark in document by @tkoyama010 in Add under construction indicate mark in document #167
Set the aspect ratio to 1.0 to provide margins by @tkoyama010 in Set the aspect ratio to 1.0 to provide margins #170
Change figure path to show it on PyPi Readme page by @tkoyama010 in Change figure path to show it on PyPi Readme page #171
Add a comment that this is in the pre-alpha stage by @tkoyama010 in Add a comment that this is in the pre-alpha stage #174
Bump sphinx-book-theme from 1.1.0 to 1.1.2 by @dependabot in Bump sphinx-book-theme from 1.1.0 to 1.1.2 #176
Add streamlit_app.py to deploy streamlit app by @tkoyama010 in Add streamlit_app.py to deploy streamlit app #177
Upgrade pyupgrade Python version to v3.9 by @tkoyama010 in Upgrade pyupgrade Python version to v3.9 #182
Update README.md to drop support of streamlit by @tkoyama010 in Update README.md to drop support of streamlit #185
Update logo to add Jupyter project logo to respect by @tkoyama010 in Update logo to add Jupyter project logo to respect #186
Update README.md to fix layout of description by @tkoyama010 in Update README.md to fix layout of description #187
Update README to add a prettier badge by @tkoyama010 in Update README to add a prettier badge #189
Move the project name from pvgmsh to scikit-gmsh by @tkoyama010 in Move the project name from pvgmsh to scikit-gmsh #190
Update logo to move project name to scikit-gmsh by @tkoyama010 in Update logo to move project name to scikit-gmsh #191
Fix design of logo to use black and red color by @tkoyama010 in Fix design of logo to use black and red color #192
Bump SciPy logo color from black to red by @tkoyama010 in Bump SciPy logo color from black to red #193
Bump SciPy logo color from black to gray by @tkoyama010 in Bump SciPy logo color from black to gray #194
Update supported versions in SECURITY.md to latest by @tkoyama010 in Update supported versions in SECURITY.md to latest #196
Rename MshPlotter to follow pyvista class name by @tkoyama010 in Rename MshPlotter to follow pyvista class name #197
Fix design of logo to use blue color by @tkoyama010 in Fix design of logo to use blue color #200
Fix design of logo to use only edge of gmsh logo by @tkoyama010 in Fix design of logo to use only edge of gmsh logo #201
Update badges in README to use for-the-badge style by @tkoyama010 in Update badges in README to use for-the-badge style #202
Update badges in README to use for-the-badge style by @tkoyama010 in Update badges in README to use for-the-badge style #203
Update README.md to remove NEP29 badge by @tkoyama010 in Update README.md to remove NEP29 badge #204
Use Matplotlib aliceblue color in the mesh figure by @tkoyama010 in Use Matplotlib aliceblue color in the mesh figure #205
Set enable parallel projection default in Plotter by @tkoyama010 in Set enable parallel projection default in Plotter #206
Unify badge position to CONTRIBUTION.rst by @tkoyama010 in Unify badge position to CONTRIBUTION.rst #208
Update README.md to fix small typos by @tkoyama010 in Update README.md to fix small typos #210
Update README.md to add the License section by @tkoyama010 in Update README.md to add the License section #209
Move code formatting badge to contribution section by @tkoyama010 in Move code formatting badge to contribution section #211
Update README.md to remove the badge of formatting by @tkoyama010 in Update README.md to remove the badge of formatting #212
Update README.md to move the docs badge to TOC by @tkoyama010 in Update README.md to move the docs badge to TOC #213
Add the add_box_axes method to the Plotter class by @tkoyama010 in Add the add_box_axes method to the Plotter class #214
Update SECURITY.md to small suggestion of fix by @tkoyama010 in Update SECURITY.md to small suggestion of fix #215
Update README to show welcome for new contributor by @tkoyama010 in Update README to show welcome for new contributor #221
Let's make Authors section rock! by @tkoyama010 in Let's make Authors section rock! #222
Add nox badge in CONTRIBUTING at the test section by @tkoyama010 in Add nox badge in CONTRIBUTING at the test section #224
Move from reStructuredText files to Markdown files by @tkoyama010 in Move from reStructuredText files to Markdown files #226

Maintenance

Move gmsh initializes and points to the definition in each cell by @tkoyama010 in Move gmsh initializes and points to the definition in each cell #3
Move the example to docstring for doctest by @tkoyama010 in Move the example to docstring for doctest #5
Delete tests files as test is moved to doctest by @tkoyama010 in Delete tests files as test is moved to doctest #6
Add blackdoc to .pre-commit-config.yaml by @tkoyama010 in Add blackdoc to .pre-commit-config.yaml #7
Fix name of parameter poly_data to edge_source by @tkoyama010 in Fix name of parameter poly_data to edge_source #8
Fix gmsh method name to snake case to follow PEP8 by @tkoyama010 in Fix gmsh method name to snake case to follow PEP8 #11
Rename function frontal_delaunay_2d to frontal_delaunay_2d by @tkoyama010 in Rename function frontal_delaunay_2d to frontal_delaunay_2d #12
Move flat layout to src layout by @tkoyama010 in Move flat layout to src layout #13
Clear mesh array data in frontal_delaunay_2d by @tkoyama010 in Clear mesh array data in frontal_delaunay_2d #15
Add numpydoc to .pre-commit-config.yaml by @tkoyama010 in Add numpydoc to .pre-commit-config.yaml #17
Fix parameter name from mesh_size to target_size by @tkoyama010 in Fix parameter name from mesh_size to target_size #22
Use import alias pg inspired by import pyvista as pv by @tkoyama010 in Use import alias pg inspired by import pyvista as pv #24
[pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in [pre-commit.ci] pre-commit autoupdate #27
Updated Python support to v3.12 by @tkoyama010 in Updated Python support to v3.12 #28
Use alias pm instead of using pg by @tkoyama010 in Use alias pm instead of using pg #29
Move PyVista and Gmsh dependency to pyproject.toml by @tkoyama010 in Move PyVista and Gmsh dependency to pyproject.toml #30
Dropping black and use ruff as formatter by @tkoyama010 in Dropping black and use ruff as formatter #31
Update pyproject.toml to add options of ruff by @tkoyama010 in Update pyproject.toml to add options of ruff #32
Fix variable definitions to match argument definitions by @tkoyama010 in Fix variable definitions to match argument definitions #33
Define option number as variable by @tkoyama010 in Define option number as variable #36
Remove docstring which is checking PyVista output by @tkoyama010 in Remove docstring which is checking PyVista output #37
Create dependabot.yml to enable Dependabot by @tkoyama010 in Create dependabot.yml to enable Dependabot #41
Bump pytest from 7.1.2 to 7.4.3 by @dependabot in Bump pytest from 7.1.2 to 7.4.3 #44
Bump actions/checkout from 3 to 4 by @dependabot in Bump actions/checkout from 3 to 4 #42
Add pygmsh dependency to extract generated mesh to meshio by @tkoyama010 in Add pygmsh dependency to extract generated mesh to meshio #40
Bump actions/setup-python from 4 to 5 by @dependabot in Bump actions/setup-python from 4 to 5 #43
Create release.yml to automate creating release note by @tkoyama010 in Create release.yml to automate creating release note #46
Update __init__.py defining variables to improve readability by @tkoyama010 in Update __init__.py defining variables to improve readability #54
Bump pytest from 7.4.3 to 7.4.4 by @dependabot in Bump pytest from 7.4.3 to 7.4.4 #56
Move the project name from pyvista-gmsh to pvgmsh by @tkoyama010 in Move the project name from pyvista-gmsh to pvgmsh #59
[pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in [pre-commit.ci] pre-commit autoupdate #62
Use wrap function to convert to PyVista dataset by @tkoyama010 in Use wrap function to convert to PyVista dataset #70
Bump pyvista from 0.43.1 to 0.43.2 by @dependabot in Bump pyvista from 0.43.1 to 0.43.2 #71
Bump gmsh from 4.12.0 to 4.12.1 by @dependabot in Bump gmsh from 4.12.0 to 4.12.1 #72
[pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in [pre-commit.ci] pre-commit autoupdate #78
Adopt sp-repo-review pre-commit by @tkoyama010 in Adopt sp-repo-review pre-commit #79
Add GH rules of Scientific-Python Development Guide by @tkoyama010 in Add GH rules of Scientific-Python Development Guide #81
Add PC rules of Scientific-Python Development Guide by @tkoyama010 in Add PC rules of Scientific-Python Development Guide #82
Add RF rules of Scientific-Python Development Guide by @tkoyama010 in Add RF rules of Scientific-Python Development Guide #85
Add RTD rules of Scientific-Python Development Guide by @tkoyama010 in Add RTD rules of Scientific-Python Development Guide #86
Add MY rules of Scientific-Python Development Guide by @tkoyama010 in Add MY rules of Scientific-Python Development Guide #84
Add PP rules of Scientific-Python Development Guide by @tkoyama010 in Add PP rules of Scientific-Python Development Guide #83
Add PY rules of Scientific-Python Development Guide by @tkoyama010 in Add PY rules of Scientific-Python Development Guide #80
chore: update pre-commit hooks by @pre-commit-ci in chore: update pre-commit hooks #87
Delete _version.py and merge into __init__.py by @tkoyama010 in Delete _version.py and merge into __init__.py #90
Fix the path of release.yml from root to .github by @tkoyama010 in Fix the path of release.yml from root to .github #93
Add an action automatically labeling pull requests by @tkoyama010 in Add an action automatically labeling pull requests #97
Add support python version policy following NEP29 by @tkoyama010 in Add support python version policy following NEP29 #98
Fix typo of docs in labeler.yml which doesn't work by @tkoyama010 in Fix typo of docs in labeler.yml which doesn't work #99
Add GitHub token setting to use github/labeler.yml by @tkoyama010 in Add GitHub token setting to use github/labeler.yml #103
Bump gmsh from 4.12.1 to 4.12.2 by @dependabot in Bump gmsh from 4.12.1 to 4.12.2 #104
Fix the error of access file in the labeler action by @tkoyama010 in Fix the error of access file in the labeler action #106
Remove sparse checkout to use the file to labeling by @tkoyama010 in Remove sparse checkout to use the file to labeling #107
Fix the path of markdown document to use for label by @tkoyama010 in Fix the path of markdown document to use for label #108
Add auto-approve.yml to review requests by the bot by @tkoyama010 in Add auto-approve.yml to review requests by the bot #109
Fix the error of auto-approve and the command by @tkoyama010 in Fix the error of auto-approve and the command #111
Fix the version dependencies to reduce breakages by @tkoyama010 in Fix the version dependencies to reduce breakages #113
Publish package releases using the GitHub Actions by @tkoyama010 in Publish package releases using the GitHub Actions #114
Delete test publish until the project is accepted by @tkoyama010 in Delete test publish until the project is accepted #115
Add extra checks in the numpy docstring rules by @tkoyama010 in Add extra checks in the numpy docstring rules #117
Add Report class to report information of pvgmsh by @tkoyama010 in Add Report class to report information of pvgmsh #116
Add an issue template to report issues properly by @tkoyama010 in Add an issue template to report issues properly #118
Add PULL_REQUEST_TEMPLATE.md to make explicit PR by @tkoyama010 in Add PULL_REQUEST_TEMPLATE.md to make explicit PR #119
Fix typo in Python code when reporting environment by @tkoyama010 in Fix typo in Python code when reporting environment #124
Add comparing number of points and cells in test by @tkoyama010 in Add comparing number of points and cells in test #125
Revert "Delete test publish until the project is accepted" by @tkoyama010 in Revert "Delete test publish until the project is accepted" #126
Bump the actions group with 2 updates by @dependabot in Bump the actions group with 2 updates #127
Revert "Revert "Delete test publish until the project is accepted"" by @tkoyama010 in Revert "Revert "Delete test publish until the project is accepted"" #128
Add date information to development version number by @tkoyama010 in Add date information to development version number #129
Publish test PyPI release using the GitHub Actions by @tkoyama010 in Publish test PyPI release using the GitHub Actions #130
Revert "Publish test PyPI release using the GitHub Actions" by @tkoyama010 in Revert "Publish test PyPI release using the GitHub Actions" #131
Publish test PyPI release using the GitHub Actions by @tkoyama010 in Publish test PyPI release using the GitHub Actions #132
Add readme to pyproject.toml to fix twine error by @tkoyama010 in Add readme to pyproject.toml to fix twine error #133
Add setup.py to fix the twine error uploading PyPI by @tkoyama010 in Add setup.py to fix the twine error uploading PyPI #134
chore: update pre-commit hooks by @pre-commit-ci in chore: update pre-commit hooks #146
Bump flake8-isort to 6.1.1 to resolve py312 error by @tkoyama010 in Bump flake8-isort to 6.1.1 to resolve py312 error #149
Sort alphabetical configuration of labeling files by @tkoyama010 in Sort alphabetical configuration of labeling files #155
Update meshio requirement from <5.3.5 to <5.3.6 by @dependabot in Update meshio requirement from <5.3.5 to <5.3.6 #156
Sort the list of install packages using apt-get by @tkoyama010 in Sort the list of install packages using apt-get #165
chore: update pre-commit hooks by @pre-commit-ci in chore: update pre-commit hooks #168
Update config.yml to fix small project name typo by @tkoyama010 in Update config.yml to fix small project name typo #169
Add toml file to prettier check to format files by @tkoyama010 in Add toml file to prettier check to format files #172
Bump the actions group with 1 update by @dependabot in Bump the actions group with 1 update #173
chore: update pre-commit hooks by @pre-commit-ci in chore: update pre-commit hooks #175
Delete requirements and move to pyproject.toml by @tkoyama010 in Delete requirements and move to pyproject.toml #178
Update pyproject.toml to add a poetry section by @tkoyama010 in Update pyproject.toml to add a poetry section #179
Add packages.txt to install packages in the cloud by @tkoyama010 in Add packages.txt to install packages in the cloud #180
chore: update pre-commit hooks by @pre-commit-ci in chore: update pre-commit hooks #183
Add toml-sort lint to sort and format toml files by @tkoyama010 in Add toml-sort lint to sort and format toml files #184
Dropping flake8 to replace ruff linter check by @tkoyama010 in Dropping flake8 to replace ruff linter check #207
Dropping streamlit app support to focus on trame by @tkoyama010 in Dropping streamlit app support to focus on trame #216
Dropping Makefile support to use the nox by @tkoyama010 in Dropping Makefile support to use the nox #217
Revert "Dropping Makefile support to use the nox" by @tkoyama010 in Revert "Dropping Makefile support to use the nox" #218
Update .pre-commit-config.yaml to fix the src path by @tkoyama010 in Update .pre-commit-config.yaml to fix the src path #219
Update pyproject.toml to remove numpydoc validation by @tkoyama010 in Update pyproject.toml to remove numpydoc validation #220
chore: update pre-commit hooks by @pre-commit-ci in chore: update pre-commit hooks #223
chore: update pre-commit hooks by @pre-commit-ci in chore: update pre-commit hooks #225
chore: update pre-commit hooks by @pre-commit-ci in chore: update pre-commit hooks #227
chore: update pre-commit hooks by @pre-commit-ci in chore: update pre-commit hooks #228
Remove testpypi publishing from publish-to-pypi.yml by @tkoyama010 in Remove testpypi publishing from publish-to-pypi.yml #230

New Contributors

@pre-commit-ci made their first contribution in [pre-commit.ci] pre-commit autoupdate #27
@dependabot made their first contribution in Bump pytest from 7.1.2 to 7.4.3 #44

Full Changelog: https://github.com/pyvista/scikit-gmsh/commits/v0.1

This discussion was created from the release v0.1.

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