From 14b6911eea656201334e7e49b7c9437160c75b92 Mon Sep 17 00:00:00 2001 From: Liz Gehret Date: Thu, 16 Jan 2025 16:15:30 -0700 Subject: [PATCH] add citation to ccs method --- q2_dada2/plugin_setup.py | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) diff --git a/q2_dada2/plugin_setup.py b/q2_dada2/plugin_setup.py index 2b520e7..ecaaed7 100644 --- a/q2_dada2/plugin_setup.py +++ b/q2_dada2/plugin_setup.py @@ -21,6 +21,7 @@ _POOL_OPT = {'pseudo', 'independent'} _CHIM_OPT = {'consensus', 'none'} +citations = qiime2.plugin.Citations.load('citations.bib', package='q2_dada2') plugin = qiime2.plugin.Plugin( name='dada2', version=q2_dada2.__version__, @@ -29,8 +30,7 @@ description=('This QIIME 2 plugin wraps DADA2 and supports ' 'sequence quality control for single-end and paired-end ' 'reads using the DADA2 R library.'), - short_description='Plugin for sequence quality control with DADA2.', - citations=qiime2.plugin.Citations.load('citations.bib', package='q2_dada2') + short_description='Plugin for sequence quality control with DADA2.' ) @@ -512,7 +512,8 @@ description='This method denoises single-end Pacbio CCS sequences, ' 'dereplicates them, and filters chimeras. ' 'Tutorial and workflow: ' - 'https://github.com/benjjneb/LRASManuscript' + 'https://github.com/benjjneb/LRASManuscript', + citations=[citations['callahan2019dada2ccs']] )