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Benchmark IO speed of different backends #22

@Mr-Milk

Description

@Mr-Milk

Goal

Benchmark the image reading speed of different backends using a PyTorch Dataset that loads image tiles.

Description

  • The dataset will read and load tiles from images using different image I/O backends (e.g., OpenSlide, PIL, tifffile, zarr, etc.).
  • Input images can be in various formats.
  • For testing the OME-Zarr backend, input images will be converted to OME-Zarr format beforehand.

Tasks

  • Define a standard tile sampling protocol for consistent benchmarking.
  • Convert a representative set of test images into OME-Zarr format.
  • Measure and compare tile reading time per backend.

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