shinyapps-deploy.yaml

# https://github.com/marketplace/actions/deploy-to-shinyapps-io
name: Deploy to shinyapps.io
on:

  # run on any push
  push:
    branches: [dev_shiny]
  release:
    types: [published]
  # run on request (via button in actions menu)
  workflow_dispatch:

jobs:
  deploy:
    name: Deploy to shinyapps

    # allow skipping deployment for commits containing '[automated]' or '[no-deploy]' in the commit message
    if: "!contains(github.event.head_commit.message, '[automated]') && !contains(github.event.head_commit.message, '[no-deploy]')"
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v2
      - name: install gtexr
        run: install.packages("devtools"); devtools::install_github("rmgpanw/gtexr@dev_shiny")
        shell: Rscript {0}
      - name: deploy
        uses: BDSI-Utwente/shinyapps-deploy-github-action@v1
        with:
          # account and application name (https://<accountName>.shinyapps.io/<appName>)
          appName: gtexr
          accountName: rmgpanw

          # token and secret obtained from https://www.shinyapps.io/admin/#/tokens
          accountToken: ${{ secrets.SHINYAPPS_TOKEN }}
          accountSecret: ${{ secrets.SHINYAPPS_SECRET }}

          appDir: inst/app