Skip to content

Commit 7b60371

Browse files
committed
update get_image() and get_dataset_info()
1 parent a6084d8 commit 7b60371

File tree

4 files changed

+24
-3
lines changed

4 files changed

+24
-3
lines changed

R/get_dataset_info.R

Lines changed: 6 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -1,6 +1,9 @@
11
#' Get Dataset Info
22
#'
3-
#' NB This current returns empty values.
3+
#' @description [GTEx Portal API
4+
#' documentation](https://gtexportal.org/api/v2/redoc#tag/Metadata-Endpoints/operation/get_dataset_info_api_v2_metadata_dataset_get)
5+
#'
6+
#' @details Note: this current only returns empty values.
47
#'
58
#' @inheritParams gtexr_arguments
69
#'
@@ -9,7 +12,9 @@
912
#' @family Metadata Endpoints
1013
#'
1114
#' @examples
15+
#' \dontrun{
1216
#' get_dataset_info()
17+
#' }
1318
get_dataset_info <- function(datasetId = "gtex_v8",
1419
organizationName = "GTEx Consortium") {
1520
gtex_query(endpoint = "metadata/dataset")

R/get_image.R

Lines changed: 7 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -1,14 +1,21 @@
11
#' Get Image
22
#'
3+
#' @description [GTEx Portal API
4+
#' documentation](https://gtexportal.org/api/v2/redoc#tag/Histology-Endpoints/operation/get_image_api_v2_histology_image_get)
5+
#'
36
#' @inheritParams gtexr_arguments
47
#'
58
#' @return A tibble.
69
#' @export
710
#' @family Histology Endpoints
811
#'
912
#' @examples
13+
#' \dontrun{
1014
#' get_image()
15+
#'
16+
#' # filter by `tissueSampleId`
1117
#' get_image(tissueSampleIds = "GTEX-1117F-0226", page = 0, itemsPerPage = 100000)
18+
#' }
1219
get_image <- function(tissueSampleIds = NULL,
1320
page = 0,
1421
itemsPerPage = 250) {

man/get_dataset_info.Rd

Lines changed: 6 additions & 1 deletion
Some generated files are not rendered by default. Learn more about customizing how changed files appear on GitHub.

man/get_image.Rd

Lines changed: 5 additions & 1 deletion
Some generated files are not rendered by default. Learn more about customizing how changed files appear on GitHub.

0 commit comments

Comments
 (0)