check.yaml

# This workflow file is from https://github.com/stan-dev/cmdstanr/blob/master/.github/workflows
# under the BSD 3-Clause License: https://github.com/stan-dev/cmdstanr/blob/master/LICENSE.md.
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on: [push, pull_request]

name: check

jobs:
  check:
    if: "! contains(github.event.head_commit.message, '[ci skip]')"
    runs-on: ${{ matrix.config.os }}

    name: ${{ matrix.config.os }} (${{ matrix.config.r }})

    strategy:
      fail-fast: false
      matrix:
        config:
          - {os: macOS-latest,   r: 'release', rtools: ''}
          - {os: windows-latest, r: 'release', rtools: '42'}
          - {os: ubuntu-latest,   r: 'devel', rtools: '', http-user-agent: 'release'}
          - {os: ubuntu-latest,   r: 'release', rtools: ''}
          - {os: ubuntu-latest,   r: 'oldrel-1', rtools: ''}

    env:
      R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
      NOT_CRAN: true

    steps:
      - name: cmdstan env vars
        run: |
          echo "CMDSTAN_PATH=${HOME}/.cmdstan" >> $GITHUB_ENV
        shell: bash

      - uses: actions/checkout@v3

      - name: Install system dependencies
        if: runner.os == 'Linux'
        run: |
          sudo apt-get update
          sudo apt-get install -y libglpk-dev libglpk40 libcurl4-openssl-dev openmpi-bin openmpi-common libopenmpi-dev || true

      - uses: r-lib/actions/setup-r@v2.2.4
        with:
          r-version: ${{ matrix.config.r }}
          rtools-version: ${{ matrix.config.rtools }}

      - uses: r-lib/actions/setup-pandoc@v2.2.4

      - name: Repos
        run: |
          cat("\noptions(repos=c(ropensci='https://ropensci.r-universe.dev',CRAN ='https://cloud.r-project.org'))\n", file = "~/.Rprofile", append = TRUE)
        shell: Rscript {0}

      - uses: r-lib/actions/setup-r-dependencies@v2
        with:
          extra-packages: any::rcmdcheck
          needs: check

      - name: Install cmdstan
        run: |
          cmdstanr::check_cmdstan_toolchain(fix = TRUE)
          cmdstanr::install_cmdstan(cores = 2)
        shell: Rscript {0}

      - uses: r-lib/actions/check-r-package@v2
        with:
          upload-snapshots: true