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DESCRIPTION
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DESCRIPTION
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Package: stantargets
Title: Targets for Stan Workflows
Description: Bayesian data analysis usually incurs long runtimes
and cumbersome custom code. A pipeline toolkit tailored to Bayesian
statisticians, the 'stantargets' R package leverages
'targets' and 'cmdstanr' to ease these burdens.
'stantargets' makes it super easy to set up scalable
Stan pipelines that automatically parallelize the computation
and skip expensive steps when the results are already up to date.
Minimal custom code is required, and there is no need to manually
configure branching, so usage is much easier than 'targets' alone.
'stantargets' can access all of 'cmdstanr''s major algorithms
(MCMC, variational Bayes, and optimization) and it supports
both single-fit workflows and multi-rep simulation studies.
For the statistical methodology, please refer to 'Stan' documentation
(Stan Development Team 2020) <https://mc-stan.org/>.
Version: 0.1.1.9000
License: MIT + file LICENSE
URL: https://docs.ropensci.org/stantargets/, https://github.com/ropensci/stantargets
BugReports: https://github.com/ropensci/stantargets/issues
Authors@R: c(
person(
given = c("William", "Michael"),
family = "Landau",
role = c("aut", "cre"),
email = "will.landau.oss@gmail.com",
comment = c(ORCID = "0000-0003-1878-3253")
),
person(
given = "Krzysztof",
family = "Sakrejda",
role = "rev"
),
person(
given = c("Matthew", "T."),
family = "Warkentin",
role = "rev"
),
person(
family = "Eli Lilly and Company",
role = "cph"
))
Depends:
R (>= 3.5.0)
Imports:
cmdstanr (>= 0.5.0),
fs (>= 1.5.0),
fst (>= 0.9.2),
posterior (>= 1.0.1),
purrr (>= 0.3.4),
qs (>= 0.23.2),
rlang (>= 0.4.10),
secretbase (>= 0.4.0),
stats,
targets (>= 1.6.0),
tarchetypes (>= 0.8.0),
tibble (>= 3.0.1),
tidyselect,
withr (>= 2.1.2)
Suggests:
dplyr (>= 1.0.2),
ggplot2 (>= 3.0.0),
knitr (>= 1.30),
R.utils (>= 2.10.1),
rmarkdown (>= 2.3),
SBC (>= 0.2.0),
testthat (>= 3.0.0),
tidyr (>= 1.0.0),
visNetwork (>= 2.0.9)
Remotes:
hyunjimoon/SBC,
stan-dev/cmdstanr,
SystemRequirements: CmdStan >= 2.25.0
Encoding: UTF-8
Language: en-US
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.1
VignetteBuilder: knitr
Config/testthat/edition: 3