From 5802702fd3fbf6d63efdda613f012fcda1f4d7f9 Mon Sep 17 00:00:00 2001 From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com> Date: Sun, 1 Feb 2026 17:44:31 +0000 Subject: [PATCH 1/2] ci(dependabot): bump the actions group with 2 updates Bumps the actions group with 2 updates: [actions/upload-artifact](https://github.com/actions/upload-artifact) and [actions/download-artifact](https://github.com/actions/download-artifact). Updates `actions/upload-artifact` from 5 to 6 - [Release notes](https://github.com/actions/upload-artifact/releases) - [Commits](https://github.com/actions/upload-artifact/compare/v5...v6) Updates `actions/download-artifact` from 6 to 7 - [Release notes](https://github.com/actions/download-artifact/releases) - [Commits](https://github.com/actions/download-artifact/compare/v6...v7) --- updated-dependencies: - dependency-name: actions/upload-artifact dependency-version: '6' dependency-type: direct:production update-type: version-update:semver-major dependency-group: actions - dependency-name: actions/download-artifact dependency-version: '7' dependency-type: direct:production update-type: version-update:semver-major dependency-group: actions ... Signed-off-by: dependabot[bot] --- .github/workflows/benchmarks.yml | 6 +++--- .github/workflows/release.yml | 2 +- .github/workflows/test.yml | 2 +- 3 files changed, 5 insertions(+), 5 deletions(-) diff --git a/.github/workflows/benchmarks.yml b/.github/workflows/benchmarks.yml index ada8fb64..f15b87bb 100644 --- a/.github/workflows/benchmarks.yml +++ b/.github/workflows/benchmarks.yml @@ -170,7 +170,7 @@ jobs: fi - - uses: actions/upload-artifact@v5 + - uses: actions/upload-artifact@v6 if: always() with: name: asv-benchmark-results-${{ github.run_id }}-${{ github.run_number }}-${{ github.run_attempt }}-${{ matrix.benchmark-name }} @@ -182,13 +182,13 @@ jobs: if: always() steps: - name: Download artifact - uses: actions/download-artifact@v6 + uses: actions/download-artifact@v7 with: pattern: asv-benchmark-results* path: asv_result merge-multiple: true - name: Upload artifact - uses: actions/upload-artifact@v5 + uses: actions/upload-artifact@v6 with: name: asv-benchmark-results-${{ github.run_id }}-${{ github.run_number }}-${{ github.run_attempt }} path: asv_result diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index 3c55bdff..f3a49a69 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -21,7 +21,7 @@ jobs: steps: - name: Download built artifact to dist/ - uses: actions/download-artifact@v6 + uses: actions/download-artifact@v7 with: name: Packages path: dist diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml index c81ae17b..4674b81c 100644 --- a/.github/workflows/test.yml +++ b/.github/workflows/test.yml @@ -66,7 +66,7 @@ jobs: - name: Archive figures generated during testing if: always() - uses: actions/upload-artifact@v5 + uses: actions/upload-artifact@v6 with: name: plotting-results-${{ matrix.python-version }}-${{ matrix.platform }} path: /Users/runner/work/napari-spatialdata/napari-spatialdata/tests/plots/generated/* From 021e5c558e2023ebacdcd5bb525e36e45ba94e55 Mon Sep 17 00:00:00 2001 From: "pre-commit-ci[bot]" <66853113+pre-commit-ci[bot]@users.noreply.github.com> Date: Sun, 1 Feb 2026 17:46:47 +0000 Subject: [PATCH 2/2] [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci --- src/napari_spatialdata/_widgets.py | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/src/napari_spatialdata/_widgets.py b/src/napari_spatialdata/_widgets.py index d4f130bf..9be7b1cf 100644 --- a/src/napari_spatialdata/_widgets.py +++ b/src/napari_spatialdata/_widgets.py @@ -24,13 +24,14 @@ from vispy import scene from vispy.color.colormap import Colormap, MatplotlibColormap from vispy.scene.widgets import ColorBarWidget + # See https://github.com/scverse/squidpy/issues/1061 for more details. # Scanpy 0.11.x-0.12.x renamed set_default_colors_for_categorical_obs to _set_default_colors_for_categorical_obs # and then changed it back. Try underscore version first, fall back to non-underscore. try: from scanpy.plotting._utils import _set_default_colors_for_categorical_obs as set_default_colors_for_categorical_obs except ImportError: - from scanpy.plotting._utils import set_default_colors_for_categorical_obs + pass # See https://github.com/scverse/squidpy/issues/1061 for more details. # Scanpy 0.11.x-0.12.x renamed set_default_colors_for_categorical_obs to _set_default_colors_for_categorical_obs