_pkgdown.yml

title: isorunN2O
url: https://isorunN2O.kopflab.com
template:
  params:
    bootswatch: simplex

home:
  strip_header: true

navbar:
  title: isorunN2O
  type: default
  left:
  - text: Home
    href: index.html
  - text: Tutorial
    href: articles/N2O_data_reduction_tutorial.html
  - text: Reference
    href: reference/index.html
  right:
  - icon: fa-github fa-lg
    href: https://github.com/sebkopf/isorunN2O

reference:
- title: Graphical User Interface
  desc: >

  contents:
  - '`run_data_viewer`'

- title: Data Structuring
  desc: >

  contents:
  - '`parse_file_names`'
  - '`select_columns`'
  - '`select_N2O_peak`'
  - '`set_background`'
  - '`set_oxidation_blank`'
  - '`set_run_size`'
  - '`change_category`'

- title: Data Processing
  desc: >
    Functions based on calculations.
  contents:
  - '`correct_N2O_for_17O`'
  - '`evaluate_drift`'
  - '`calculate_background`'
  - '`calculate_concentrations`'
  - '`calculate_oxidation_blank`'
  - '`calibrate_d15_org`'
  - '`calibrate_d15`'
  - '`calibrate_d18`'

- title: Data Visualization and Reporting
  desc: >

  contents:
  - '`plot_overview`'
  - '`make_interactive`'
  - '`make_itext`'
  - '`generate_data_table`'
  - '`generate_parameter_table`'

- title: Internal functions
  desc: >

  contents:
  - '`default_cache_file`'
  - '`get_calib_coef`'
  - '`get_isodat_data_tables`'
  - '`load_cache`'
  - '`save_cache`'
  - '`load_run_folder`'
  - '`round_to_err`'
  - '`run_d15_calibration`'