From cd0b4af8f4456544e3d41f2c0819066617235c9b Mon Sep 17 00:00:00 2001 From: shawnlaffan Date: Fri, 2 Feb 2024 13:04:18 +1100 Subject: [PATCH] Bump version to 4.99_002 --- bin/BiodiverseGUI.pl | 2 +- bin/load_and_randomise.pl | 2 +- bin/load_and_randomise_wrapper.pl | 2 +- bin/run_randomisation.pl | 2 +- lib/App/Biodiverse.pm | 2 +- lib/Biodiverse/BaseData.pm | 2 +- lib/Biodiverse/BaseData/Exclusions.pm | 2 +- lib/Biodiverse/BaseData/Import.pm | 2 +- lib/Biodiverse/BaseData/ManageOutputs.pm | 2 +- lib/Biodiverse/BaseStruct.pm | 2 +- lib/Biodiverse/BaseStruct/Export.pm | 2 +- lib/Biodiverse/Cluster.pm | 2 +- lib/Biodiverse/Common.pm | 2 +- lib/Biodiverse/Common/Caching.pm | 3 +++ lib/Biodiverse/Config.pm | 2 +- lib/Biodiverse/Config/PARModules.pm | 2 +- lib/Biodiverse/ElementProperties.pm | 2 +- lib/Biodiverse/Exception.pm | 2 +- lib/Biodiverse/GUI/BasedataImport.pm | 2 +- lib/Biodiverse/GUI/Callbacks.pm | 2 +- lib/Biodiverse/GUI/CellPopup.pm | 2 +- lib/Biodiverse/GUI/DeleteElementProperties.pm | 2 +- lib/Biodiverse/GUI/Dendrogram.pm | 2 +- lib/Biodiverse/GUI/Exclusions.pm | 2 +- lib/Biodiverse/GUI/Export.pm | 2 +- lib/Biodiverse/GUI/GUIManager.pm | 2 +- lib/Biodiverse/GUI/Grid.pm | 2 +- lib/Biodiverse/GUI/Help.pm | 2 +- lib/Biodiverse/GUI/Legend.pm | 2 +- lib/Biodiverse/GUI/Manager/BaseDatas.pm | 2 +- lib/Biodiverse/GUI/MatrixGrid.pm | 2 +- lib/Biodiverse/GUI/MatrixImport.pm | 2 +- lib/Biodiverse/GUI/OpenDialog.pm | 2 +- lib/Biodiverse/GUI/Overlays.pm | 2 +- lib/Biodiverse/GUI/ParametersTable.pm | 2 +- lib/Biodiverse/GUI/PhylogenyImport.pm | 2 +- lib/Biodiverse/GUI/Popup.pm | 2 +- lib/Biodiverse/GUI/PopupObject.pm | 2 +- lib/Biodiverse/GUI/ProgressDialog.pm | 2 +- lib/Biodiverse/GUI/Project.pm | 2 +- lib/Biodiverse/GUI/RemapGUI.pm | 2 +- lib/Biodiverse/GUI/SpatialParams.pm | 2 +- lib/Biodiverse/GUI/Tabs/CalculationsTree.pm | 2 +- lib/Biodiverse/GUI/Tabs/Clustering.pm | 2 +- lib/Biodiverse/GUI/Tabs/Labels.pm | 2 +- lib/Biodiverse/GUI/Tabs/Outputs.pm | 2 +- lib/Biodiverse/GUI/Tabs/Randomise.pm | 2 +- lib/Biodiverse/GUI/Tabs/RegionGrower.pm | 2 +- lib/Biodiverse/GUI/Tabs/Spatial.pm | 2 +- lib/Biodiverse/GUI/Tabs/SpatialMatrix.pm | 2 +- lib/Biodiverse/GUI/Tabs/Tab.pm | 2 +- lib/Biodiverse/GUI/YesNoCancel.pm | 2 +- lib/Biodiverse/Index.pm | 2 +- lib/Biodiverse/Indices.pm | 2 +- lib/Biodiverse/Indices/Endemism.pm | 2 +- lib/Biodiverse/Indices/GroupProperties.pm | 2 +- lib/Biodiverse/Indices/HierarchicalLabels.pm | 2 +- lib/Biodiverse/Indices/Indices.pm | 2 +- lib/Biodiverse/Indices/LabelCounts.pm | 2 +- lib/Biodiverse/Indices/LabelProperties.pm | 2 +- lib/Biodiverse/Indices/LabelPropertiesRangeWtd.pm | 2 +- lib/Biodiverse/Indices/Matrix_Indices.pm | 2 +- lib/Biodiverse/Indices/Numeric_Labels.pm | 2 +- lib/Biodiverse/Indices/PhyloCom.pm | 2 +- lib/Biodiverse/Indices/Phylogenetic.pm | 2 +- lib/Biodiverse/Indices/Phylogenetic/RefAlias.pm | 2 +- lib/Biodiverse/Indices/PhylogeneticRelative.pm | 2 +- lib/Biodiverse/Indices/PhylogeneticRelative/RefAlias.pm | 2 +- lib/Biodiverse/Indices/RWTurnover.pm | 2 +- lib/Biodiverse/Indices/Rarity.pm | 2 +- lib/Biodiverse/Indices/RichnessEstimation.pm | 2 +- lib/Biodiverse/Matrix.pm | 2 +- lib/Biodiverse/Matrix/Base.pm | 2 +- lib/Biodiverse/Matrix/LowMem.pm | 2 +- lib/Biodiverse/Metadata.pm | 2 +- lib/Biodiverse/Metadata/BaseStruct.pm | 2 +- lib/Biodiverse/Metadata/Export.pm | 2 +- lib/Biodiverse/Metadata/Indices.pm | 2 +- lib/Biodiverse/Metadata/Parameter.pm | 2 +- lib/Biodiverse/Metadata/Randomisation.pm | 2 +- lib/Biodiverse/Metadata/SpatialConditions.pm | 2 +- lib/Biodiverse/Progress.pm | 2 +- lib/Biodiverse/Randomise.pm | 2 +- lib/Biodiverse/Randomise/IndependentSwaps.pm | 2 +- lib/Biodiverse/ReadNexus.pm | 2 +- lib/Biodiverse/RegionGrower.pm | 2 +- lib/Biodiverse/Remap.pm | 2 +- lib/Biodiverse/RemapGuesser.pm | 2 +- lib/Biodiverse/Spatial.pm | 2 +- lib/Biodiverse/SpatialConditions.pm | 2 +- lib/Biodiverse/SpatialConditions/DefQuery.pm | 2 +- lib/Biodiverse/SpatialConditions/SpCalc.pm | 2 +- lib/Biodiverse/SpatialParams.pm | 2 +- lib/Biodiverse/SpatialParams/DefQuery.pm | 2 +- lib/Biodiverse/Statistics.pm | 2 +- lib/Biodiverse/Tree.pm | 2 +- lib/Biodiverse/TreeNode.pm | 2 +- lib/Biodiverse/TreeNode/BootstrapBlock.pm | 2 +- lib/Biodiverse/Utilities.pm | 2 +- lib/BiodiverseX/Indices/IEI.pm | 2 +- lib/BiodiverseX/Indices/Phylogenetic.pm | 2 +- t/lib/Biodiverse/TestHelpers.pm | 2 +- 102 files changed, 104 insertions(+), 101 deletions(-) diff --git a/bin/BiodiverseGUI.pl b/bin/BiodiverseGUI.pl index 87772ecef..bf5dd8107 100755 --- a/bin/BiodiverseGUI.pl +++ b/bin/BiodiverseGUI.pl @@ -44,7 +44,7 @@ BEGIN #no warnings 'redefine'; no warnings 'once'; use English qw { -no_match_vars }; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; local $OUTPUT_AUTOFLUSH = 1; diff --git a/bin/load_and_randomise.pl b/bin/load_and_randomise.pl index 0190e99ad..b4459c517 100644 --- a/bin/load_and_randomise.pl +++ b/bin/load_and_randomise.pl @@ -12,7 +12,7 @@ local $| = 1; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::Config; diff --git a/bin/load_and_randomise_wrapper.pl b/bin/load_and_randomise_wrapper.pl index 4135ec59d..6c3d05716 100644 --- a/bin/load_and_randomise_wrapper.pl +++ b/bin/load_and_randomise_wrapper.pl @@ -12,7 +12,7 @@ use rlib; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; # are we running as a PerlApp executable? my $perl_app_tool = $PerlApp::TOOL; diff --git a/bin/run_randomisation.pl b/bin/run_randomisation.pl index 4cce76ab7..1922393ec 100644 --- a/bin/run_randomisation.pl +++ b/bin/run_randomisation.pl @@ -15,7 +15,7 @@ local $| = 1; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::Config; use Biodiverse::BaseData; diff --git a/lib/App/Biodiverse.pm b/lib/App/Biodiverse.pm index 1223201ab..6013b935b 100644 --- a/lib/App/Biodiverse.pm +++ b/lib/App/Biodiverse.pm @@ -3,7 +3,7 @@ package App::Biodiverse; use strict; use warnings; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; 1; diff --git a/lib/Biodiverse/BaseData.pm b/lib/Biodiverse/BaseData.pm index be1f45d36..a506c95f5 100644 --- a/lib/Biodiverse/BaseData.pm +++ b/lib/Biodiverse/BaseData.pm @@ -43,7 +43,7 @@ use Biodiverse::Indices; use Biodiverse::Metadata::Parameter; my $parameter_metadata_class = 'Biodiverse::Metadata::Parameter'; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use parent qw { Biodiverse::Common diff --git a/lib/Biodiverse/BaseData/Exclusions.pm b/lib/Biodiverse/BaseData/Exclusions.pm index fe8221775..f6803b55e 100644 --- a/lib/Biodiverse/BaseData/Exclusions.pm +++ b/lib/Biodiverse/BaseData/Exclusions.pm @@ -4,7 +4,7 @@ use strict; use warnings; use 5.022; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Carp; use Scalar::Util qw /looks_like_number blessed reftype/; diff --git a/lib/Biodiverse/BaseData/Import.pm b/lib/Biodiverse/BaseData/Import.pm index cc21bb692..13582c9cb 100644 --- a/lib/Biodiverse/BaseData/Import.pm +++ b/lib/Biodiverse/BaseData/Import.pm @@ -4,7 +4,7 @@ use warnings; use 5.022; use English qw { -no_match_vars }; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::Metadata::Parameter; my $parameter_metadata_class = 'Biodiverse::Metadata::Parameter'; diff --git a/lib/Biodiverse/BaseData/ManageOutputs.pm b/lib/Biodiverse/BaseData/ManageOutputs.pm index f1f263c97..8e504f55d 100644 --- a/lib/Biodiverse/BaseData/ManageOutputs.pm +++ b/lib/Biodiverse/BaseData/ManageOutputs.pm @@ -4,7 +4,7 @@ use strict; use warnings; use 5.022; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Carp; use Scalar::Util qw /looks_like_number blessed reftype/; diff --git a/lib/Biodiverse/BaseStruct.pm b/lib/Biodiverse/BaseStruct.pm index b253bc707..4d15960f0 100644 --- a/lib/Biodiverse/BaseStruct.pm +++ b/lib/Biodiverse/BaseStruct.pm @@ -25,7 +25,7 @@ use Sort::Key::Natural qw /natsort rnatsort/; use constant HAVE_DATA_RECURSIVE => !$ENV{BD_NO_USE_PANDA} && eval 'require Data::Recursive'; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; my $EMPTY_STRING = q{}; diff --git a/lib/Biodiverse/BaseStruct/Export.pm b/lib/Biodiverse/BaseStruct/Export.pm index 643fe89b9..c017aa3a3 100644 --- a/lib/Biodiverse/BaseStruct/Export.pm +++ b/lib/Biodiverse/BaseStruct/Export.pm @@ -4,7 +4,7 @@ use strict; use warnings; use 5.022; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Carp; use English ( -no_match_vars ); diff --git a/lib/Biodiverse/Cluster.pm b/lib/Biodiverse/Cluster.pm index de6dddf1c..1c2b7698e 100644 --- a/lib/Biodiverse/Cluster.pm +++ b/lib/Biodiverse/Cluster.pm @@ -3,7 +3,7 @@ package Biodiverse::Cluster; use 5.010; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Carp; use strict; diff --git a/lib/Biodiverse/Common.pm b/lib/Biodiverse/Common.pm index a3e03eb2b..cf34d7ba8 100644 --- a/lib/Biodiverse/Common.pm +++ b/lib/Biodiverse/Common.pm @@ -51,7 +51,7 @@ require Clone; use parent qw(Biodiverse::Common::Caching); -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; my $EMPTY_STRING = q{}; diff --git a/lib/Biodiverse/Common/Caching.pm b/lib/Biodiverse/Common/Caching.pm index b99a49f08..ed5786ec9 100644 --- a/lib/Biodiverse/Common/Caching.pm +++ b/lib/Biodiverse/Common/Caching.pm @@ -2,6 +2,9 @@ package Biodiverse::Common::Caching; use strict; use warnings; + +our $VERSION = '4.99_002'; + # set any value - allows user specified additions to the core stuff sub set_cached_value { my $self = shift; diff --git a/lib/Biodiverse/Config.pm b/lib/Biodiverse/Config.pm index edfa07d07..99d883539 100644 --- a/lib/Biodiverse/Config.pm +++ b/lib/Biodiverse/Config.pm @@ -16,7 +16,7 @@ use Ref::Util qw { :all }; use English ( -no_match_vars ); -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; #use Exporter; #use Devel::Symdump; diff --git a/lib/Biodiverse/Config/PARModules.pm b/lib/Biodiverse/Config/PARModules.pm index 3991beb2a..cd7b47668 100644 --- a/lib/Biodiverse/Config/PARModules.pm +++ b/lib/Biodiverse/Config/PARModules.pm @@ -3,7 +3,7 @@ use strict; use warnings; use 5.016; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Carp; diff --git a/lib/Biodiverse/ElementProperties.pm b/lib/Biodiverse/ElementProperties.pm index 3ec62ef55..0ba3582a6 100644 --- a/lib/Biodiverse/ElementProperties.pm +++ b/lib/Biodiverse/ElementProperties.pm @@ -7,7 +7,7 @@ use Scalar::Util qw/looks_like_number/; use Biodiverse::Exception; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use parent qw /Biodiverse::BaseStruct Biodiverse::Common/; #/ use Ref::Util qw { :all }; diff --git a/lib/Biodiverse/Exception.pm b/lib/Biodiverse/Exception.pm index 1598fd89d..8ba3fd902 100644 --- a/lib/Biodiverse/Exception.pm +++ b/lib/Biodiverse/Exception.pm @@ -1,7 +1,7 @@ package Biodiverse::Exception; use strict; use warnings; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Config; my ($bit_size, $prng_init_descr, $other_bit_size); diff --git a/lib/Biodiverse/GUI/BasedataImport.pm b/lib/Biodiverse/GUI/BasedataImport.pm index b934b657a..d831ea2fd 100644 --- a/lib/Biodiverse/GUI/BasedataImport.pm +++ b/lib/Biodiverse/GUI/BasedataImport.pm @@ -7,7 +7,7 @@ use English ( -no_match_vars ); use Carp; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use File::Basename; use Gtk2; diff --git a/lib/Biodiverse/GUI/Callbacks.pm b/lib/Biodiverse/GUI/Callbacks.pm index 2aa4579cf..4022f8c6c 100644 --- a/lib/Biodiverse/GUI/Callbacks.pm +++ b/lib/Biodiverse/GUI/Callbacks.pm @@ -7,7 +7,7 @@ use English ( -no_match_vars ); use Browser::Start qw( open_url ); # needed for the about dialogue -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use constant FALSE => 0; use constant TRUE => 1; diff --git a/lib/Biodiverse/GUI/CellPopup.pm b/lib/Biodiverse/GUI/CellPopup.pm index 2e3ef0cd6..4a113348d 100644 --- a/lib/Biodiverse/GUI/CellPopup.pm +++ b/lib/Biodiverse/GUI/CellPopup.pm @@ -11,7 +11,7 @@ use Sort::Key::Natural qw /natsort/; use Ref::Util qw /is_ref is_arrayref is_hashref/; use Biodiverse::Utilities qw/sort_list_with_tree_names_aa/; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Gtk2; diff --git a/lib/Biodiverse/GUI/DeleteElementProperties.pm b/lib/Biodiverse/GUI/DeleteElementProperties.pm index 34f6e80cb..e61a091d7 100644 --- a/lib/Biodiverse/GUI/DeleteElementProperties.pm +++ b/lib/Biodiverse/GUI/DeleteElementProperties.pm @@ -5,7 +5,7 @@ use strict; use warnings; use Carp; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Gtk2; #use Biodiverse::RemapGuesser qw/guess_remap/; diff --git a/lib/Biodiverse/GUI/Dendrogram.pm b/lib/Biodiverse/GUI/Dendrogram.pm index d4c90e36a..dd2b31418 100644 --- a/lib/Biodiverse/GUI/Dendrogram.pm +++ b/lib/Biodiverse/GUI/Dendrogram.pm @@ -17,7 +17,7 @@ use Gtk2; use Gnome2::Canvas; use POSIX qw /ceil/; # for ceil() -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::GUI::GUIManager; use Biodiverse::TreeNode; diff --git a/lib/Biodiverse/GUI/Exclusions.pm b/lib/Biodiverse/GUI/Exclusions.pm index 9270151be..b14ac642c 100644 --- a/lib/Biodiverse/GUI/Exclusions.pm +++ b/lib/Biodiverse/GUI/Exclusions.pm @@ -8,7 +8,7 @@ use Carp; use Gtk2; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::GUI::GUIManager; use Biodiverse::GUI::ParametersTable; diff --git a/lib/Biodiverse/GUI/Export.pm b/lib/Biodiverse/GUI/Export.pm index 7f3d7e65e..dd1a98082 100644 --- a/lib/Biodiverse/GUI/Export.pm +++ b/lib/Biodiverse/GUI/Export.pm @@ -16,7 +16,7 @@ use Cwd; use List::MoreUtils qw /any none/; use Path::Tiny qw /path/; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::GUI::GUIManager; use Biodiverse::GUI::ParametersTable; diff --git a/lib/Biodiverse/GUI/GUIManager.pm b/lib/Biodiverse/GUI/GUIManager.pm index f7fa949f8..54ac3682e 100644 --- a/lib/Biodiverse/GUI/GUIManager.pm +++ b/lib/Biodiverse/GUI/GUIManager.pm @@ -6,7 +6,7 @@ use 5.010; #use Data::Structure::Util qw /has_circular_ref get_refs/; # hunting for circular refs -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; #use Data::Dumper; use Carp; diff --git a/lib/Biodiverse/GUI/Grid.pm b/lib/Biodiverse/GUI/Grid.pm index 6dfad79ec..aabe68071 100644 --- a/lib/Biodiverse/GUI/Grid.pm +++ b/lib/Biodiverse/GUI/Grid.pm @@ -21,7 +21,7 @@ use Tree::R; use Geo::ShapeFile; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::GUI::GUIManager; use Biodiverse::GUI::CellPopup; diff --git a/lib/Biodiverse/GUI/Help.pm b/lib/Biodiverse/GUI/Help.pm index e7b3bf328..51cf4d88e 100644 --- a/lib/Biodiverse/GUI/Help.pm +++ b/lib/Biodiverse/GUI/Help.pm @@ -17,7 +17,7 @@ require IO::Socket::SSL; use Biodiverse::GUI::YesNoCancel; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; ############################################## # Web links. diff --git a/lib/Biodiverse/GUI/Legend.pm b/lib/Biodiverse/GUI/Legend.pm index 27a0367b9..236cf49ae 100644 --- a/lib/Biodiverse/GUI/Legend.pm +++ b/lib/Biodiverse/GUI/Legend.pm @@ -23,7 +23,7 @@ use Tree::R; #use Geo::ShapeFile; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::GUI::GUIManager; use Biodiverse::GUI::CellPopup; diff --git a/lib/Biodiverse/GUI/Manager/BaseDatas.pm b/lib/Biodiverse/GUI/Manager/BaseDatas.pm index 2b074c42e..3e57b05ac 100644 --- a/lib/Biodiverse/GUI/Manager/BaseDatas.pm +++ b/lib/Biodiverse/GUI/Manager/BaseDatas.pm @@ -4,7 +4,7 @@ use strict; use warnings; use 5.022; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Carp; use Scalar::Util qw /blessed/; diff --git a/lib/Biodiverse/GUI/MatrixGrid.pm b/lib/Biodiverse/GUI/MatrixGrid.pm index 04dced73e..3e9d324d7 100644 --- a/lib/Biodiverse/GUI/MatrixGrid.pm +++ b/lib/Biodiverse/GUI/MatrixGrid.pm @@ -16,7 +16,7 @@ use POSIX qw /floor/; use List::Util qw /min max/; use List::MoreUtils qw /minmax/; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Gtk2; use Gnome2::Canvas; diff --git a/lib/Biodiverse/GUI/MatrixImport.pm b/lib/Biodiverse/GUI/MatrixImport.pm index 7ca15baa8..4f18b0fea 100644 --- a/lib/Biodiverse/GUI/MatrixImport.pm +++ b/lib/Biodiverse/GUI/MatrixImport.pm @@ -8,7 +8,7 @@ use Ref::Util qw { :all }; use Gtk2; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::GUI::Project; use Biodiverse::GUI::BasedataImport diff --git a/lib/Biodiverse/GUI/OpenDialog.pm b/lib/Biodiverse/GUI/OpenDialog.pm index 4fe42fa22..d82e71acc 100644 --- a/lib/Biodiverse/GUI/OpenDialog.pm +++ b/lib/Biodiverse/GUI/OpenDialog.pm @@ -11,7 +11,7 @@ use Gtk2; use Cwd; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::GUI::GUIManager; use Ref::Util qw { :all }; diff --git a/lib/Biodiverse/GUI/Overlays.pm b/lib/Biodiverse/GUI/Overlays.pm index 71941256c..1046d2c5a 100644 --- a/lib/Biodiverse/GUI/Overlays.pm +++ b/lib/Biodiverse/GUI/Overlays.pm @@ -6,7 +6,7 @@ use Gtk2; #use Data::Dumper; use Geo::ShapeFile; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::GUI::GUIManager; use Biodiverse::GUI::Project; diff --git a/lib/Biodiverse/GUI/ParametersTable.pm b/lib/Biodiverse/GUI/ParametersTable.pm index 4a4a3d8de..f78ce6539 100644 --- a/lib/Biodiverse/GUI/ParametersTable.pm +++ b/lib/Biodiverse/GUI/ParametersTable.pm @@ -60,7 +60,7 @@ use Gtk2; use Carp; use English qw { -no_match_vars }; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::GUI::GUIManager; use Biodiverse::GUI::SpatialParams; diff --git a/lib/Biodiverse/GUI/PhylogenyImport.pm b/lib/Biodiverse/GUI/PhylogenyImport.pm index d7dd48721..a0a8ca214 100644 --- a/lib/Biodiverse/GUI/PhylogenyImport.pm +++ b/lib/Biodiverse/GUI/PhylogenyImport.pm @@ -13,7 +13,7 @@ use Biodiverse::GUI::BasedataImport; use Biodiverse::GUI::YesNoCancel; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::GUI::Project; diff --git a/lib/Biodiverse/GUI/Popup.pm b/lib/Biodiverse/GUI/Popup.pm index 9002fd045..5265721c8 100644 --- a/lib/Biodiverse/GUI/Popup.pm +++ b/lib/Biodiverse/GUI/Popup.pm @@ -9,7 +9,7 @@ use Biodiverse::Utilities qw/sort_list_with_tree_names_aa/; use Gtk2; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use English qw { -no_match_vars }; diff --git a/lib/Biodiverse/GUI/PopupObject.pm b/lib/Biodiverse/GUI/PopupObject.pm index b764c830b..a3a278a7e 100644 --- a/lib/Biodiverse/GUI/PopupObject.pm +++ b/lib/Biodiverse/GUI/PopupObject.pm @@ -3,7 +3,7 @@ package Biodiverse::GUI::PopupObject; use strict; use warnings; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Gtk2; diff --git a/lib/Biodiverse/GUI/ProgressDialog.pm b/lib/Biodiverse/GUI/ProgressDialog.pm index 8c4655044..d7b61bd27 100644 --- a/lib/Biodiverse/GUI/ProgressDialog.pm +++ b/lib/Biodiverse/GUI/ProgressDialog.pm @@ -17,7 +17,7 @@ use Time::HiRes qw/time/; require Biodiverse::Config; my $progress_update_interval = $Biodiverse::Config::progress_update_interval; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; my $TRUE = 'TRUE'; my $FALSE = 'FALSE'; diff --git a/lib/Biodiverse/GUI/Project.pm b/lib/Biodiverse/GUI/Project.pm index 22fa6a5f0..898ac4607 100644 --- a/lib/Biodiverse/GUI/Project.pm +++ b/lib/Biodiverse/GUI/Project.pm @@ -15,7 +15,7 @@ use Ref::Util qw { :all }; use English ( -no_match_vars ); -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; require Exporter; use parent qw/Exporter Biodiverse::Common/; diff --git a/lib/Biodiverse/GUI/RemapGUI.pm b/lib/Biodiverse/GUI/RemapGUI.pm index 9321f2df5..7d5a4b8d1 100644 --- a/lib/Biodiverse/GUI/RemapGUI.pm +++ b/lib/Biodiverse/GUI/RemapGUI.pm @@ -4,7 +4,7 @@ use 5.010; use strict; use warnings; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Gtk2; use Biodiverse::RemapGuesser qw/guess_remap/; diff --git a/lib/Biodiverse/GUI/SpatialParams.pm b/lib/Biodiverse/GUI/SpatialParams.pm index 3bb0bfd69..9ff420fc3 100644 --- a/lib/Biodiverse/GUI/SpatialParams.pm +++ b/lib/Biodiverse/GUI/SpatialParams.pm @@ -21,7 +21,7 @@ use Carp; use English qw { -no_match_vars }; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Glib; use Gtk2; diff --git a/lib/Biodiverse/GUI/Tabs/CalculationsTree.pm b/lib/Biodiverse/GUI/Tabs/CalculationsTree.pm index 9bc59b52f..902f2e37b 100644 --- a/lib/Biodiverse/GUI/Tabs/CalculationsTree.pm +++ b/lib/Biodiverse/GUI/Tabs/CalculationsTree.pm @@ -19,7 +19,7 @@ use Biodiverse::Indices; use Ref::Util qw { :all }; use Text::Wrapper; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; #use Readonly; my $i; diff --git a/lib/Biodiverse/GUI/Tabs/Clustering.pm b/lib/Biodiverse/GUI/Tabs/Clustering.pm index ee7f856e0..bb40e6149 100644 --- a/lib/Biodiverse/GUI/Tabs/Clustering.pm +++ b/lib/Biodiverse/GUI/Tabs/Clustering.pm @@ -25,7 +25,7 @@ use Biodiverse::GUI::Tabs::CalculationsTree; use Biodiverse::Indices; use Biodiverse::Utilities qw/sort_list_with_tree_names_aa/; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::Cluster; use Biodiverse::RegionGrower; diff --git a/lib/Biodiverse/GUI/Tabs/Labels.pm b/lib/Biodiverse/GUI/Tabs/Labels.pm index 9b63a3665..0a352f96a 100644 --- a/lib/Biodiverse/GUI/Tabs/Labels.pm +++ b/lib/Biodiverse/GUI/Tabs/Labels.pm @@ -29,7 +29,7 @@ use Biodiverse::GUI::Overlays; use Biodiverse::Metadata::Parameter; my $parameter_metadata_class = 'Biodiverse::Metadata::Parameter'; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use parent qw { Biodiverse::GUI::Tabs::Tab diff --git a/lib/Biodiverse/GUI/Tabs/Outputs.pm b/lib/Biodiverse/GUI/Tabs/Outputs.pm index 8bcca457d..c16039c8b 100644 --- a/lib/Biodiverse/GUI/Tabs/Outputs.pm +++ b/lib/Biodiverse/GUI/Tabs/Outputs.pm @@ -13,7 +13,7 @@ use Biodiverse::GUI::Export; use English ( -no_match_vars ); -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use parent qw {Biodiverse::GUI::Tabs::Tab}; diff --git a/lib/Biodiverse/GUI/Tabs/Randomise.pm b/lib/Biodiverse/GUI/Tabs/Randomise.pm index b2c97711d..f1c2d4feb 100644 --- a/lib/Biodiverse/GUI/Tabs/Randomise.pm +++ b/lib/Biodiverse/GUI/Tabs/Randomise.pm @@ -9,7 +9,7 @@ use English ( -no_match_vars ); use Gtk2; use Biodiverse::Randomise; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::GUI::GUIManager; use Biodiverse::GUI::Project; diff --git a/lib/Biodiverse/GUI/Tabs/RegionGrower.pm b/lib/Biodiverse/GUI/Tabs/RegionGrower.pm index c1aaf68d3..137c97909 100644 --- a/lib/Biodiverse/GUI/Tabs/RegionGrower.pm +++ b/lib/Biodiverse/GUI/Tabs/RegionGrower.pm @@ -5,7 +5,7 @@ package Biodiverse::GUI::Tabs::RegionGrower; use strict; use warnings; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use parent qw / Biodiverse::GUI::Tabs::Clustering diff --git a/lib/Biodiverse/GUI/Tabs/Spatial.pm b/lib/Biodiverse/GUI/Tabs/Spatial.pm index c86989f96..03da4d5fd 100644 --- a/lib/Biodiverse/GUI/Tabs/Spatial.pm +++ b/lib/Biodiverse/GUI/Tabs/Spatial.pm @@ -5,7 +5,7 @@ use warnings; use English ( -no_match_vars ); -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Gtk2; use Carp; diff --git a/lib/Biodiverse/GUI/Tabs/SpatialMatrix.pm b/lib/Biodiverse/GUI/Tabs/SpatialMatrix.pm index 4a1210f14..5bbfd6b05 100644 --- a/lib/Biodiverse/GUI/Tabs/SpatialMatrix.pm +++ b/lib/Biodiverse/GUI/Tabs/SpatialMatrix.pm @@ -5,7 +5,7 @@ use 5.010; use English ( -no_match_vars ); -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Gtk2; use Carp; diff --git a/lib/Biodiverse/GUI/Tabs/Tab.pm b/lib/Biodiverse/GUI/Tabs/Tab.pm index 871f19993..4f6232c11 100644 --- a/lib/Biodiverse/GUI/Tabs/Tab.pm +++ b/lib/Biodiverse/GUI/Tabs/Tab.pm @@ -3,7 +3,7 @@ use strict; use warnings; use 5.010; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use List::Util qw/min max/; use Scalar::Util qw /blessed/; diff --git a/lib/Biodiverse/GUI/YesNoCancel.pm b/lib/Biodiverse/GUI/YesNoCancel.pm index 04bf3c84a..6f1221a30 100644 --- a/lib/Biodiverse/GUI/YesNoCancel.pm +++ b/lib/Biodiverse/GUI/YesNoCancel.pm @@ -7,7 +7,7 @@ use Gtk2; use English ( -no_match_vars ); -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::GUI::GUIManager; diff --git a/lib/Biodiverse/Index.pm b/lib/Biodiverse/Index.pm index d61ab2067..18eb1b04a 100644 --- a/lib/Biodiverse/Index.pm +++ b/lib/Biodiverse/Index.pm @@ -29,7 +29,7 @@ use Ref::Util qw { :all }; use Biodiverse::Progress; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use parent qw /Biodiverse::Common/; diff --git a/lib/Biodiverse/Indices.pm b/lib/Biodiverse/Indices.pm index 0bb39e570..faf3cbafa 100644 --- a/lib/Biodiverse/Indices.pm +++ b/lib/Biodiverse/Indices.pm @@ -22,7 +22,7 @@ use Class::Inspector; use Biodiverse::Exception; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; my $EMPTY_STRING = q{}; diff --git a/lib/Biodiverse/Indices/Endemism.pm b/lib/Biodiverse/Indices/Endemism.pm index a5409ebdc..0d6223a6f 100644 --- a/lib/Biodiverse/Indices/Endemism.pm +++ b/lib/Biodiverse/Indices/Endemism.pm @@ -4,7 +4,7 @@ use warnings; use Carp; use 5.020; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; my $metadata_class = 'Biodiverse::Metadata::Indices'; diff --git a/lib/Biodiverse/Indices/GroupProperties.pm b/lib/Biodiverse/Indices/GroupProperties.pm index 857aed854..f6e6584c7 100644 --- a/lib/Biodiverse/Indices/GroupProperties.pm +++ b/lib/Biodiverse/Indices/GroupProperties.pm @@ -8,7 +8,7 @@ use warnings; use Carp; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Statistics::Descriptive::PDL::SampleWeighted 0.11; my $stats_class_weighted = 'Statistics::Descriptive::PDL::SampleWeighted'; diff --git a/lib/Biodiverse/Indices/HierarchicalLabels.pm b/lib/Biodiverse/Indices/HierarchicalLabels.pm index 86ed26d93..193dab165 100644 --- a/lib/Biodiverse/Indices/HierarchicalLabels.pm +++ b/lib/Biodiverse/Indices/HierarchicalLabels.pm @@ -6,7 +6,7 @@ use warnings; use Scalar::Util qw /blessed/; use Biodiverse::Progress; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; my $metadata_class = 'Biodiverse::Metadata::Indices'; diff --git a/lib/Biodiverse/Indices/Indices.pm b/lib/Biodiverse/Indices/Indices.pm index f19fbb750..4f9c6dcef 100644 --- a/lib/Biodiverse/Indices/Indices.pm +++ b/lib/Biodiverse/Indices/Indices.pm @@ -11,7 +11,7 @@ use Ref::Util qw { :all }; use English ( -no_match_vars ); use Readonly; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::Statistics; my $stats_class = 'Biodiverse::Statistics'; diff --git a/lib/Biodiverse/Indices/LabelCounts.pm b/lib/Biodiverse/Indices/LabelCounts.pm index f04b74bb5..93f617261 100644 --- a/lib/Biodiverse/Indices/LabelCounts.pm +++ b/lib/Biodiverse/Indices/LabelCounts.pm @@ -5,7 +5,7 @@ use warnings; use 5.022; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::Statistics; diff --git a/lib/Biodiverse/Indices/LabelProperties.pm b/lib/Biodiverse/Indices/LabelProperties.pm index a64b97912..a180e0776 100644 --- a/lib/Biodiverse/Indices/LabelProperties.pm +++ b/lib/Biodiverse/Indices/LabelProperties.pm @@ -4,7 +4,7 @@ use warnings; use Carp; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Ref::Util qw { :all }; diff --git a/lib/Biodiverse/Indices/LabelPropertiesRangeWtd.pm b/lib/Biodiverse/Indices/LabelPropertiesRangeWtd.pm index 20f1cfcb2..7dc6d5993 100644 --- a/lib/Biodiverse/Indices/LabelPropertiesRangeWtd.pm +++ b/lib/Biodiverse/Indices/LabelPropertiesRangeWtd.pm @@ -4,7 +4,7 @@ use warnings; use Carp; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; my $metadata_class = 'Biodiverse::Metadata::Indices'; diff --git a/lib/Biodiverse/Indices/Matrix_Indices.pm b/lib/Biodiverse/Indices/Matrix_Indices.pm index 83e73a318..99badefd3 100644 --- a/lib/Biodiverse/Indices/Matrix_Indices.pm +++ b/lib/Biodiverse/Indices/Matrix_Indices.pm @@ -7,7 +7,7 @@ use warnings; use Carp; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; #use Statistics::Descriptive; #my $stats_class = 'Statistics::Descriptive::Full'; diff --git a/lib/Biodiverse/Indices/Numeric_Labels.pm b/lib/Biodiverse/Indices/Numeric_Labels.pm index 5c1ec20fc..2c0c360c6 100644 --- a/lib/Biodiverse/Indices/Numeric_Labels.pm +++ b/lib/Biodiverse/Indices/Numeric_Labels.pm @@ -11,7 +11,7 @@ use List::Util qw /sum min max/; use Carp; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Statistics::Descriptive::PDL::SampleWeighted 0.15; my $stats_class_weighted = 'Statistics::Descriptive::PDL::SampleWeighted'; diff --git a/lib/Biodiverse/Indices/PhyloCom.pm b/lib/Biodiverse/Indices/PhyloCom.pm index b8fc6961f..67f0b6414 100644 --- a/lib/Biodiverse/Indices/PhyloCom.pm +++ b/lib/Biodiverse/Indices/PhyloCom.pm @@ -14,7 +14,7 @@ use Sort::Key qw /nkeysort/; use feature 'refaliasing'; no warnings 'experimental::refaliasing'; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::Matrix::LowMem; my $mx_class_for_trees = 'Biodiverse::Matrix::LowMem'; diff --git a/lib/Biodiverse/Indices/Phylogenetic.pm b/lib/Biodiverse/Indices/Phylogenetic.pm index 5a27cc523..2af13ba32 100644 --- a/lib/Biodiverse/Indices/Phylogenetic.pm +++ b/lib/Biodiverse/Indices/Phylogenetic.pm @@ -16,7 +16,7 @@ use Biodiverse::Progress; use List::Util 1.33 qw /any sum min max/; use Scalar::Util qw /blessed/; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use constant HAVE_BD_UTILS => eval 'require Biodiverse::Utils'; use constant HAVE_BD_UTILS_108 => HAVE_BD_UTILS && eval '$Biodiverse::Utils::VERSION >= 1.08'; diff --git a/lib/Biodiverse/Indices/Phylogenetic/RefAlias.pm b/lib/Biodiverse/Indices/Phylogenetic/RefAlias.pm index 1f8edec19..1ed764e44 100644 --- a/lib/Biodiverse/Indices/Phylogenetic/RefAlias.pm +++ b/lib/Biodiverse/Indices/Phylogenetic/RefAlias.pm @@ -2,7 +2,7 @@ package Biodiverse::Indices::Phylogenetic::RefAlias; use strict; use warnings; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use feature 'refaliasing'; no warnings 'experimental::refaliasing'; diff --git a/lib/Biodiverse/Indices/PhylogeneticRelative.pm b/lib/Biodiverse/Indices/PhylogeneticRelative.pm index 5dd22c99c..e74b5231d 100644 --- a/lib/Biodiverse/Indices/PhylogeneticRelative.pm +++ b/lib/Biodiverse/Indices/PhylogeneticRelative.pm @@ -13,7 +13,7 @@ use parent qw /Biodiverse::Indices::PhylogeneticRelative::RefAlias/; use Carp; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; my $metadata_class = 'Biodiverse::Metadata::Indices'; diff --git a/lib/Biodiverse/Indices/PhylogeneticRelative/RefAlias.pm b/lib/Biodiverse/Indices/PhylogeneticRelative/RefAlias.pm index 9e600c58a..92ef78af1 100644 --- a/lib/Biodiverse/Indices/PhylogeneticRelative/RefAlias.pm +++ b/lib/Biodiverse/Indices/PhylogeneticRelative/RefAlias.pm @@ -2,7 +2,7 @@ package Biodiverse::Indices::PhylogeneticRelative::RefAlias; use strict; use warnings; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use feature 'refaliasing'; no warnings 'experimental::refaliasing'; diff --git a/lib/Biodiverse/Indices/RWTurnover.pm b/lib/Biodiverse/Indices/RWTurnover.pm index 705711951..c2241a29e 100644 --- a/lib/Biodiverse/Indices/RWTurnover.pm +++ b/lib/Biodiverse/Indices/RWTurnover.pm @@ -10,7 +10,7 @@ no warnings 'experimental::refaliasing'; use Carp; use List::Util qw /sum reduce/; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; my $metadata_class = 'Biodiverse::Metadata::Indices'; diff --git a/lib/Biodiverse/Indices/Rarity.pm b/lib/Biodiverse/Indices/Rarity.pm index da84332d6..2f06f4158 100644 --- a/lib/Biodiverse/Indices/Rarity.pm +++ b/lib/Biodiverse/Indices/Rarity.pm @@ -3,7 +3,7 @@ use strict; use warnings; use 5.020; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; # we need access to one sub from Endemism.pm use parent qw /Biodiverse::Indices::Endemism/; diff --git a/lib/Biodiverse/Indices/RichnessEstimation.pm b/lib/Biodiverse/Indices/RichnessEstimation.pm index 4af182c07..cc4de5aa1 100644 --- a/lib/Biodiverse/Indices/RichnessEstimation.pm +++ b/lib/Biodiverse/Indices/RichnessEstimation.pm @@ -9,7 +9,7 @@ use Carp; use List::Util qw /max min sum/; use experimental qw /refaliasing/; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; my $metadata_class = 'Biodiverse::Metadata::Indices'; diff --git a/lib/Biodiverse/Matrix.pm b/lib/Biodiverse/Matrix.pm index 9fca3f206..4e93fa030 100644 --- a/lib/Biodiverse/Matrix.pm +++ b/lib/Biodiverse/Matrix.pm @@ -8,7 +8,7 @@ use strict; use warnings; use 5.010; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use English ( -no_match_vars ); use experimental qw /refaliasing/; diff --git a/lib/Biodiverse/Matrix/Base.pm b/lib/Biodiverse/Matrix/Base.pm index 037c897d8..81f4850b1 100644 --- a/lib/Biodiverse/Matrix/Base.pm +++ b/lib/Biodiverse/Matrix/Base.pm @@ -9,7 +9,7 @@ use English qw / -no_match_vars/; use Scalar::Util qw /looks_like_number blessed/; use List::Util qw /min max sum/; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::Exception; use Ref::Util qw { :all }; diff --git a/lib/Biodiverse/Matrix/LowMem.pm b/lib/Biodiverse/Matrix/LowMem.pm index 2b37e8850..2087a4d8b 100644 --- a/lib/Biodiverse/Matrix/LowMem.pm +++ b/lib/Biodiverse/Matrix/LowMem.pm @@ -6,7 +6,7 @@ use warnings; use Carp; use List::Util qw /min max/; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::Matrix; use Biodiverse::Exception; diff --git a/lib/Biodiverse/Metadata.pm b/lib/Biodiverse/Metadata.pm index 7084c9cc2..d98e4e965 100644 --- a/lib/Biodiverse/Metadata.pm +++ b/lib/Biodiverse/Metadata.pm @@ -4,7 +4,7 @@ use strict; use warnings; use Ref::Util qw { :all }; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; sub new { my ($class, $data) = @_; diff --git a/lib/Biodiverse/Metadata/BaseStruct.pm b/lib/Biodiverse/Metadata/BaseStruct.pm index 155681d09..11b0f5d35 100644 --- a/lib/Biodiverse/Metadata/BaseStruct.pm +++ b/lib/Biodiverse/Metadata/BaseStruct.pm @@ -5,7 +5,7 @@ use 5.016; use Carp; use Readonly; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use parent qw /Biodiverse::Metadata/; diff --git a/lib/Biodiverse/Metadata/Export.pm b/lib/Biodiverse/Metadata/Export.pm index 101f8a2a9..9c4b20308 100644 --- a/lib/Biodiverse/Metadata/Export.pm +++ b/lib/Biodiverse/Metadata/Export.pm @@ -6,7 +6,7 @@ use 5.016; use Carp; use Readonly; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use parent qw /Biodiverse::Metadata/; diff --git a/lib/Biodiverse/Metadata/Indices.pm b/lib/Biodiverse/Metadata/Indices.pm index 611049dc8..7bec55d2b 100644 --- a/lib/Biodiverse/Metadata/Indices.pm +++ b/lib/Biodiverse/Metadata/Indices.pm @@ -7,7 +7,7 @@ use Readonly; use parent qw /Biodiverse::Metadata/; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; Readonly my %methods_and_defaults => ( name => 'no_name', diff --git a/lib/Biodiverse/Metadata/Parameter.pm b/lib/Biodiverse/Metadata/Parameter.pm index 086ed63c9..b0ec35b27 100644 --- a/lib/Biodiverse/Metadata/Parameter.pm +++ b/lib/Biodiverse/Metadata/Parameter.pm @@ -11,7 +11,7 @@ use Readonly; use parent qw /Biodiverse::Metadata/; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; # Poss too many, but we are a catch-all class. diff --git a/lib/Biodiverse/Metadata/Randomisation.pm b/lib/Biodiverse/Metadata/Randomisation.pm index e718d7fc5..bcc72306f 100644 --- a/lib/Biodiverse/Metadata/Randomisation.pm +++ b/lib/Biodiverse/Metadata/Randomisation.pm @@ -7,7 +7,7 @@ use Readonly; use parent qw /Biodiverse::Metadata/; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; my %methods_and_defaults = ( diff --git a/lib/Biodiverse/Metadata/SpatialConditions.pm b/lib/Biodiverse/Metadata/SpatialConditions.pm index 2e6aa3380..9a9af151a 100644 --- a/lib/Biodiverse/Metadata/SpatialConditions.pm +++ b/lib/Biodiverse/Metadata/SpatialConditions.pm @@ -6,7 +6,7 @@ use Carp; use Readonly; use Clone qw /clone/; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use parent qw /Biodiverse::Metadata/; diff --git a/lib/Biodiverse/Progress.pm b/lib/Biodiverse/Progress.pm index e4e4623ce..8cf66edc8 100644 --- a/lib/Biodiverse/Progress.pm +++ b/lib/Biodiverse/Progress.pm @@ -10,7 +10,7 @@ my $NULL_STRING = q//; require Biodiverse::Config; use Biodiverse::Exception; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; sub new { my $class = shift; diff --git a/lib/Biodiverse/Randomise.pm b/lib/Biodiverse/Randomise.pm index 30e6f32b9..682281b68 100644 --- a/lib/Biodiverse/Randomise.pm +++ b/lib/Biodiverse/Randomise.pm @@ -46,7 +46,7 @@ my $parameter_rand_metadata_class = 'Biodiverse::Metadata::Parameter'; require Biodiverse::BaseData; use Biodiverse::Progress; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; my $EMPTY_STRING = q{}; diff --git a/lib/Biodiverse/Randomise/IndependentSwaps.pm b/lib/Biodiverse/Randomise/IndependentSwaps.pm index 2cc17c0e5..94b59d93c 100644 --- a/lib/Biodiverse/Randomise/IndependentSwaps.pm +++ b/lib/Biodiverse/Randomise/IndependentSwaps.pm @@ -6,7 +6,7 @@ use strict; use warnings; use 5.022; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use experimental 'refaliasing'; no warnings 'experimental::refaliasing'; diff --git a/lib/Biodiverse/ReadNexus.pm b/lib/Biodiverse/ReadNexus.pm index 729552259..707907bb4 100644 --- a/lib/Biodiverse/ReadNexus.pm +++ b/lib/Biodiverse/ReadNexus.pm @@ -19,7 +19,7 @@ use Biodiverse::TreeNode; use Biodiverse::Exception; use Biodiverse::Progress; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use parent qw /Biodiverse::Common/; diff --git a/lib/Biodiverse/RegionGrower.pm b/lib/Biodiverse/RegionGrower.pm index 63bd5755b..9907cba0e 100644 --- a/lib/Biodiverse/RegionGrower.pm +++ b/lib/Biodiverse/RegionGrower.pm @@ -3,7 +3,7 @@ use 5.010; use strict; use warnings; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use parent qw / Biodiverse::Cluster diff --git a/lib/Biodiverse/Remap.pm b/lib/Biodiverse/Remap.pm index 43d33daba..a1d866e64 100644 --- a/lib/Biodiverse/Remap.pm +++ b/lib/Biodiverse/Remap.pm @@ -14,7 +14,7 @@ use Carp; use Ref::Util qw { :all }; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use parent qw /Biodiverse::ElementProperties/; diff --git a/lib/Biodiverse/RemapGuesser.pm b/lib/Biodiverse/RemapGuesser.pm index 70e08a44e..9acb316bb 100644 --- a/lib/Biodiverse/RemapGuesser.pm +++ b/lib/Biodiverse/RemapGuesser.pm @@ -16,7 +16,7 @@ use List::Util qw /min max/; use Biodiverse::Progress; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; sub new { my $class = shift; diff --git a/lib/Biodiverse/Spatial.pm b/lib/Biodiverse/Spatial.pm index 313f33b18..e92703228 100644 --- a/lib/Biodiverse/Spatial.pm +++ b/lib/Biodiverse/Spatial.pm @@ -14,7 +14,7 @@ use List::Util 1.45 qw /first uniq/; use Time::HiRes qw /time/; use Ref::Util qw { :all }; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::SpatialConditions; use Biodiverse::SpatialConditions::DefQuery; diff --git a/lib/Biodiverse/SpatialConditions.pm b/lib/Biodiverse/SpatialConditions.pm index 40d446134..49d0d15de 100644 --- a/lib/Biodiverse/SpatialConditions.pm +++ b/lib/Biodiverse/SpatialConditions.pm @@ -27,7 +27,7 @@ use parent qw / Biodiverse::SpatialConditions::SpCalc /; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; my $metadata_class = 'Biodiverse::Metadata::SpatialConditions'; use Biodiverse::Metadata::SpatialConditions; diff --git a/lib/Biodiverse/SpatialConditions/DefQuery.pm b/lib/Biodiverse/SpatialConditions/DefQuery.pm index 79b5a766b..f8f760d5c 100644 --- a/lib/Biodiverse/SpatialConditions/DefQuery.pm +++ b/lib/Biodiverse/SpatialConditions/DefQuery.pm @@ -9,7 +9,7 @@ use Carp; use parent qw /Biodiverse::SpatialParams Biodiverse::Common/; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; sub get_type {return 'definition query'}; diff --git a/lib/Biodiverse/SpatialConditions/SpCalc.pm b/lib/Biodiverse/SpatialConditions/SpCalc.pm index 0881427b6..70c370c45 100644 --- a/lib/Biodiverse/SpatialConditions/SpCalc.pm +++ b/lib/Biodiverse/SpatialConditions/SpCalc.pm @@ -4,7 +4,7 @@ use strict; use warnings; use 5.022; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Carp; use English qw /-no_match_vars/; diff --git a/lib/Biodiverse/SpatialParams.pm b/lib/Biodiverse/SpatialParams.pm index b93cf7ab2..8ee0f415b 100644 --- a/lib/Biodiverse/SpatialParams.pm +++ b/lib/Biodiverse/SpatialParams.pm @@ -7,7 +7,7 @@ use warnings; # This is a stub for backwards compatibility. # All the content is now in Biodiverse::SpatialConditions -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use parent qw /Biodiverse::SpatialConditions/; diff --git a/lib/Biodiverse/SpatialParams/DefQuery.pm b/lib/Biodiverse/SpatialParams/DefQuery.pm index fd4774e9e..8b22a6f74 100644 --- a/lib/Biodiverse/SpatialParams/DefQuery.pm +++ b/lib/Biodiverse/SpatialParams/DefQuery.pm @@ -4,7 +4,7 @@ use 5.010; use strict; use warnings; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; # This is a stub for backwards compatibility. # All the content is now in Biodiverse::SpatialConditions diff --git a/lib/Biodiverse/Statistics.pm b/lib/Biodiverse/Statistics.pm index d9f1ac637..7add9b552 100644 --- a/lib/Biodiverse/Statistics.pm +++ b/lib/Biodiverse/Statistics.pm @@ -3,7 +3,7 @@ package Biodiverse::Statistics; use strict; use warnings; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Carp; diff --git a/lib/Biodiverse/Tree.pm b/lib/Biodiverse/Tree.pm index d15af46e8..3f8251c59 100644 --- a/lib/Biodiverse/Tree.pm +++ b/lib/Biodiverse/Tree.pm @@ -22,7 +22,7 @@ no warnings 'experimental::refaliasing'; use English qw ( -no_match_vars ); -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; our $AUTOLOAD; diff --git a/lib/Biodiverse/TreeNode.pm b/lib/Biodiverse/TreeNode.pm index 4d2efb58f..6f1e547c6 100644 --- a/lib/Biodiverse/TreeNode.pm +++ b/lib/Biodiverse/TreeNode.pm @@ -23,7 +23,7 @@ use Biodiverse::TreeNode::BootstrapBlock; use parent qw /Biodiverse::Common/; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; my $EMPTY_STRING = q{}; my $SPACE = q{ }; diff --git a/lib/Biodiverse/TreeNode/BootstrapBlock.pm b/lib/Biodiverse/TreeNode/BootstrapBlock.pm index 28f0d3b3a..97b760398 100644 --- a/lib/Biodiverse/TreeNode/BootstrapBlock.pm +++ b/lib/Biodiverse/TreeNode/BootstrapBlock.pm @@ -14,7 +14,7 @@ use Ref::Util qw /is_arrayref is_hashref/; use parent qw /Biodiverse::Common/; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; sub new { my $class = shift; diff --git a/lib/Biodiverse/Utilities.pm b/lib/Biodiverse/Utilities.pm index 986f1edc9..f79f521de 100644 --- a/lib/Biodiverse/Utilities.pm +++ b/lib/Biodiverse/Utilities.pm @@ -7,7 +7,7 @@ use Carp; use Sort::Key::Natural qw /natsort/; use Ref::Util qw /:all/; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; our @ISA = qw (Exporter); our @EXPORT = (); diff --git a/lib/BiodiverseX/Indices/IEI.pm b/lib/BiodiverseX/Indices/IEI.pm index cf4bc9117..f73959d9d 100644 --- a/lib/BiodiverseX/Indices/IEI.pm +++ b/lib/BiodiverseX/Indices/IEI.pm @@ -8,7 +8,7 @@ use Ref::Util qw { :all }; use Carp; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Biodiverse::Statistics; my $stats_package = 'Biodiverse::Statistics'; diff --git a/lib/BiodiverseX/Indices/Phylogenetic.pm b/lib/BiodiverseX/Indices/Phylogenetic.pm index dbfe64ffd..75fa44daf 100644 --- a/lib/BiodiverseX/Indices/Phylogenetic.pm +++ b/lib/BiodiverseX/Indices/Phylogenetic.pm @@ -13,7 +13,7 @@ use Biodiverse::Progress; use List::Util 1.33 qw /any sum min max/; use Scalar::Util qw /blessed/; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; my $metadata_class = 'Biodiverse::Metadata::Indices'; diff --git a/t/lib/Biodiverse/TestHelpers.pm b/t/lib/Biodiverse/TestHelpers.pm index 66de5087e..e61cbc970 100644 --- a/t/lib/Biodiverse/TestHelpers.pm +++ b/t/lib/Biodiverse/TestHelpers.pm @@ -15,7 +15,7 @@ use Test2::V0; local $| = 1; -our $VERSION = '4.99_001'; +our $VERSION = '4.99_002'; use Data::Section::Simple qw(get_data_section);