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readme.txt
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readme.txt
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DeePhage Executable
1. Prerequisites for Deployment
Verify that version 9.4 (R2018a) of the MATLAB Runtime is installed.
If not, you can run the MATLAB Runtime installer.
To find its location, enter
>>mcrinstaller
at the MATLAB prompt.
Alternatively, download and install the Linux version of the MATLAB Runtime for R2018a
from the following link on the MathWorks website:
http://www.mathworks.com/products/compiler/mcr/index.html
For more information about the MATLAB Runtime and the MATLAB Runtime installer, see
Package and Distribute in the MATLAB Compiler documentation
in the MathWorks Documentation Center.
2. Files to Deploy and Package
Files to Package for Standalone
================================
-DeePhage
-run_DeePhage.sh (shell script for temporarily setting environment variables and
executing the application)
-to run the shell script, type
./run_DeePhage.sh <mcr_directory> <argument_list>
at Linux or Mac command prompt. <mcr_directory> is the directory
where version 9.4 of the MATLAB Runtime is installed or the directory where
MATLAB is installed on the machine. <argument_list> is all the
arguments you want to pass to your application. For example,
If you have version 9.4 of the MATLAB Runtime installed in
/mathworks/home/application/v94, run the shell script as:
./run_DeePhage.sh /mathworks/home/application/v94
If you have MATLAB installed in /mathworks/devel/application/matlab,
run the shell script as:
./run_DeePhage.sh /mathworks/devel/application/matlab
-MCRInstaller.zip
Note: if end users are unable to download the MATLAB Runtime using the
instructions in the previous section, include it when building your
component by clicking the "Runtime included in package" link in the
Deployment Tool.
-This readme file
3. Definitions
For information on deployment terminology, go to
http://www.mathworks.com/help and select MATLAB Compiler >
Getting Started > About Application Deployment >
Deployment Product Terms in the MathWorks Documentation
Center.
4. Appendix
A. Linux systems:
In the following directions, replace MR/v94 by the directory on the target machine where
MATLAB is installed, or MR by the directory where the MATLAB Runtime is installed.
(1) Set the environment variable XAPPLRESDIR to this value:
MR/v94/X11/app-defaults
(2) If the environment variable LD_LIBRARY_PATH is undefined, set it to the following:
MR/v94/runtime/glnxa64:MR/v94/bin/glnxa64:MR/v94/sys/os/glnxa64:MR/v94/sys/opengl/lib/glnxa64
If it is defined, set it to the following:
${LD_LIBRARY_PATH}:MR/v94/runtime/glnxa64:MR/v94/bin/glnxa64:MR/v94/sys/os/glnxa64:MR/v94/sys/opengl/lib/glnxa64
For more detailed information about setting the MATLAB Runtime paths, see Package and
Distribute in the MATLAB Compiler documentation in the MathWorks Documentation Center.
NOTE: To make these changes persistent after logout on Linux
or Mac machines, modify the .cshrc file to include this
setenv command.
NOTE: The environment variable syntax utilizes forward
slashes (/), delimited by colons (:).
NOTE: When deploying standalone applications, you can
run the shell script file run_DeePhage.sh
instead of setting environment variables. See
section 2 "Files to Deploy and Package".