Ovando et al. 2021. Improving estimates of the state of global fisheries depends on better data. Fish and Fish. 22:1377-1391.
The following table lists all commits that were tagged and/or changed the DESCRIPTION file.
The 'Imports and LinkingTo' column shows the number of top-level package dependencies, along with package names that were added/removed in that commit.
The 'Rdirectory' column shows the number of files inside the R directory, along with filenames that were added/removed in that commit.
| SHA | Committed | Version | Imports and LinkingTo | Rdirectory | Tag |
|---|---|---|---|---|---|
| 8664634 | 2019-01-15 | 0.0.0.9000 | (8) dplyr, FishLife, magrittr, purrr, Rcpp, RcppArmadillo, stringr, TMB | (4) RcppExports, format-driors, sysdata, utils-pipe | |
| 8a1a25d | " | " | (9) tidyR | (5) -[utils-pipe], cod, fit-sraplus | |
| a9a7112 | " | " | (10) TMBhelper | (7) get_tmb_model, zzz | |
| 98e7053 | " | 1.0.0.9000 | " | " | v1.0.0.9000 |
| da85415 | " | " | (11) tmbstan | (8) sraplus-package | |
| 9f85ce1 | 2019-01-16 | " | (15) ggplot2, patchwork, ThorsonUtilities, tidybayes | (12) get-posterior, plot-driors, plot-sraplus, theme-sraplus | |
| 10a9a13 | 2019-01-17 | " | (17) rstan, rstanarm | " | |
| 2975e5c | " | " | (14) -RcppArmadillo, -rstan, -rstanarm | " | |
| 79a6afb | " | " | (16) rstan, rstanarm | " | |
| 2eb9a48 | " | 1.1.0.9000 | " | " | v1.1.0.9000 |
| 3dd2920 | " | 1.2.0.9000 | " | " | v1.2.0.9000 |
| 5baf155 | " | 1.2.1.9000 | " | " | |
| 22a7933 | 2019-01-18 | 1.2.2.9000 | " | " | |
| af7c1df | 2019-01-30 | 1.2.3.9000 | " | (13) stack-stan | |
| c9284e8 | " | 1.2.3.9001 | " | " | |
| 1a974df | 2019-01-31 | 1.2.3.9002 | " | " | |
| 650a035 | 2019-02-01 | 1.2.3.9003 | " | " | |
| 5efb2f7 | 2019-04-10 | " | (15) -ThorsonUtilities | " | |
| bf19adb | 2019-07-25 | " | " | v1.9 | |
| 1a1c7db | 2019-08-09 | 2.0.0.9000 | " | (14) sraplus-simulator | v2.0.0.9000 |
| 3c02f8d | 2019-08-12 | 2.0.1 | " | " | |
| 4c3ca5c | 2019-09-30 | 3.0.0 | " | (17) fit-prior-regression, plot-prior-posterior, summarize-sraplus | v3.0 |
| cccae5a | 2019-10-14 | 3.0.1 | " | " | |
| b77a2fc | 2019-10-16 | 3.1.0 | " | " | |
| 31ceff9 | " | 3.0.2 | " | " | |
| 6408995 | 2019-10-18 | 3.1.0 | " | (18) diagnose-sraplus | |
| 4abb122 | 2019-11-04 | 3.1.1 | " | " | |
| 2b22c6f | 2019-11-19 | 3.1.2 | " | " | |
| ecb93d1 | 2019-11-26 | 3.1.3 | " | " | |
| 87fc067 | " | 3.1.4 | " | " | |
| 9b44ebe | 2019-12-09 | 3.1.5 | " | " | |
| a9bea04 | 2019-12-12 | 3.1.6 | " | " | |
| 3dfdd58 | 2020-01-24 | 3.2.0 | " | " | |
| 6f931bc | 2020-02-14 | 3.2.1 | " | " | |
| 366fd89 | 2020-03-27 | 3.3.0 | " | " | |
| ef5cf5e | 2020-03-31 | " | (16) truncnorm | " | |
| 246a597 | " | 3.4.0 | " | " | |
| e64cfba | 2020-04-01 | " | " | " | |
| 14f5208 | 2020-04-07 | 3.4.1 | " | " | |
| b2dec1e | 2020-04-16 | 3.4.2 | " | " | |
| ae35ecf | 2020-04-24 | " | " | (17) -[sysdata] | |
| 34aebe1 | " | 3.4.3 | " | " | |
| 4789cd0 | 2020-04-28 | 3.4.4 | " | " | |
| 1494f35 | 2020-05-01 | 3.5.0 | " | " | |
| efc1a88 | 2020-05-01 | " | " | " | v3.5 |
| f7e32ff | 2020-05-06 | 3.5.1 | " | " | |
| c0c5192 | 2020-05-12 | 3.5.2 | " | " | |
| 0540dc8 | 2020-05-17 | 3.5.3 | " | " | |
| 418cd27 | 2020-05-20 | 3.5.4 | (18) doParallel, foreach | (18) utils-pipe | v3.5.4 |
| 43e83bd | 2020-06-09 | 3.5.5 | " | " | |
| 1f25ad1 | 2020-06-10 | 3.5.6 | " | " | |
| 00356a1 | 2020-06-15 | " | (19) kknn | " | |
| 52900c7 | " | 3.6.0 | " | " | |
| c0eb154 | 2020-07-10 | " | " | (19) get_prior_posterior | |
| 42a59e0 | " | 3.6.1 | " | " | |
| aba5d42 | 2020-07-15 | 3.6.3 | (20) parsnip | " | |
| 4d037b6 | 2020-08-07 | 3.7.0 | (19) -kknn | " | |
| a939a2a | 2020-08-08 | " | (21) ranger, RcppRoll | " | |
| 134490a | " | 3.7.1 | " | " | |
| 7c7df24 | 2020-09-10 | 3.7.2 | " | " | |
| d44eec5 | 2020-10-07 | " | " | " | |
| 447cc5b | 2021-06-19 | 3.7.3 | " | " | v3.73 |
| 217a1bb | 2021-11-15 | " | " | " | |
| f85f5b9 | 2022-04-14 | " | " | (23) data, find_ancestors, get_traits, search_species | |
| b25d0cf | " | 3.7.4 | (20) -TMBhelper | (24) fit_tmb | |
| 300ddbe | 2022-04-15 | " | (19) -FishLife | " | |
| 05f93f2 | 2022-09-05 | " | " | " | |
| ac05e92 | 2022-09-09 | " | " | " | |
| aa47432 | 2022-11-08 | 3.7.5 | " | " |
At aa47432 (2022-11-08), the top-level package dependencies are 19: doParallel, dplyr, foreach, ggplot2, magrittr, parsnip, patchwork, purrr, ranger, Rcpp, RcppRoll, rstan, rstanarm, stringr, tidybayes, tidyr, TMB, tmbstan, truncnorm.