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config.yml
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# This is a configuration file for the config package written
# by RStudio. To use, make sure the package `config` is installed,
# via console:
#
# R > install.packages("config")
#
# Then, you can load within a notebook chunk with `library(config)`.
#
# To use default config settings, simply write `config::get()`.
#
# You can learn more at:
# https://cran.r-project.org/web/packages/config/vignettes/introduction.html.
# TODO: Hayley you may need to update this default pattern if people plan to inherit it below as their system's pattern
default:
path:
data: "/Volumes/CAP/data"
raw: "/Volumes/CAP/data/rawData"
combined: "/Volumes/CAP/data/combinedData"
combined_raw: "/Volumes/CAP/data/rawData/combinedRawData"
code:
rdm_r_scripts: "./analysis/RDM"
qual_r_scripts: "./analysis/Qualtrics"
ax_r_scripts: "./analysis/AX"
documentation: "./documentation"
Rdata: "/Volumes/CAP/Rdata"
Rdata_files:
models: "model_output_rdm.Rdata"
QualtricsSubLevelLong: "subLevelLong.Rdata"
QualtricsSubLevelWide: "subLevelWide.Rdata"
AX_qualtrics_PCA: "axQualtricsPCA.Rdata"
code_files:
rdm_setup_data: "RDMsetup.R"
rdm_analysis: "RDManalysis.Rmd"
qualtrics_PCA: "SES_COVQ_PCA.Rmd"
ax_pca_affect: "add_sesPCA_affectVar_AX.R"
ax_setup_data: "AXsetup.R"
pt_modeling:
ptFunction: "prospectTheoryMLE/capPT.R"
ptParallelWrap: "prospectTheoryMLE/PTwrapper.R"
ptFitModel: "prospectTheoryMLE/basicPTFitting.Rmd"
RDMcsvs:
RDMbothTasks_qualtrics: "RDMallClean_Qualtrics.csv"
RDMgain_qualtrics: "RDMallCleanGain_Qualtrics.csv"
RDMloss_qualtrics: "RDMallCleanLoss_Qualtrics.csv"
RDM_rawCombined: "RDMall.csv"
RDM_allClean: "RDMallClean.csv"
RDM_missed_total_trials: "RDM_subID_missTri_totTri.csv"
AXcsvs:
AX_qualtrics: "AXallClean_Qualtrics.csv"
AX_allClean: "AXallClean.csv"
AX_rawCombined: "AXall.csv"
AX_qa: "AXqa.csv"
AX_missed_total_trials: "AX_subID_missTri_totTri.csv"
EXCLUSIONcsvs:
RDM_AX_Qual_Phs1exclusion: "allExclusionPhase1.csv"
RDM_AX_Qual_Phs2exclusion: "allExclusionPhase2.csv"
AX_exclusion: "axExclusion.csv"
QUALTRICS_exclusion: "qualtricsExclusion.csv"
RDM_exclusion: "rdmExclusion.csv"
QUALTRICScsvs:
Phs1_notScored_subID: "QualtricsPhase1_subID_notScored.csv"
Phs2_notScored_subID: "QualtricsPhase2_subID_notScored.csv"
Combined_subID_scored: "QualtricsCombined_subID_scored.csv"
Combined_subID_scored_noDuplicates: "QualtricsCombined_subID_scored_noDuplicates.csv"
Phs1_raw: "phase1/qualtricsResponses/qualtrics2phase1.csv"
Phs2_raw: "phase2/qualtricsResponses/qualtrics2phase2.csv"
SUBcsvs:
phase1_participant: "phase1_participant.csv"
phase2_participant: "phase2_participant.csv"
documentationFiles:
state_Quartilescsv: "stateQuartiles.csv"
# Ari's System User
metis:
path:
data: "/Volumes/shlab/Projects/CAP/data"
# Hayley's System User
# user:
# inherits: default
# Peter's System User
# user:
# inherits: default
# Kim's System User
#kchiew:
# path:
# data: "/Volumes/shlab/Projects/CAP/data"
# inherits: default