diff --git a/pyproject.toml b/pyproject.toml
index 55ff365..8ddf64f 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -14,7 +14,6 @@ dependencies = [
   "gunicorn",
   "redis",
   "celery[sqs,s3]",
-  "snakemake",
   "boto3",
   "flask-wtf",
   "flask-migrate",
@@ -28,6 +27,8 @@ dependencies = [
   # for updates
   "pandas",
   "biopython",
+  # for sentry
+  "sentry-sdk[flask,celery,sqlalchemy]"
 ]
 
 [project.optional-dependencies]
diff --git a/requirements.txt b/requirements.txt
index a18c840..8b8acc5 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -12,10 +12,6 @@ amqp==5.1.1 \
     --hash=sha256:2c1b13fecc0893e946c65cbd5f36427861cffa4ea2201d8f6fca22e2a373b5e2 \
     --hash=sha256:6f0956d2c23d8fa6e7691934d8c3930eadb44972cbbd1a7ae3a520f735d43359
     # via kombu
-appdirs==1.4.4 \
-    --hash=sha256:7d5d0167b2b1ba821647616af46a749d1c653740dd0d2415100fe26e27afdf41 \
-    --hash=sha256:a841dacd6b99318a741b166adb07e19ee71a274450e68237b4650ca1055ab128
-    # via snakemake
 asttokens==2.2.1 \
     --hash=sha256:4622110b2a6f30b77e1473affaa97e711bc2f07d3f10848420ff1898edbe94f3 \
     --hash=sha256:6b0ac9e93fb0335014d382b8fa9b3afa7df546984258005da0b9e7095b3deb1c
@@ -62,6 +58,10 @@ biopython==1.81 \
     --hash=sha256:ee51bb1cd7decffd24da6b76d5e01b7e2fd818ab85cf0c180226cbb5793a3abd \
     --hash=sha256:ef7c79b65b0b3f3c7dc59e20a7f8ae5758d8e852cb8b9cace590dc5617e348ba
     # via wort (pyproject.toml)
+blinker==1.7.0 \
+    --hash=sha256:c3f865d4d54db7abc53758a01601cf343fe55b84c1de4e3fa910e420b438d5b9 \
+    --hash=sha256:e6820ff6fa4e4d1d8e2747c2283749c3f547e4fee112b98555cdcdae32996182
+    # via sentry-sdk
 boto3==1.26.155 \
     --hash=sha256:2d4095e2029ce5ceccb25591f13e55aa5b8ba17794de09963654bd9ced45158f \
     --hash=sha256:dd15823e8c0554d98c18584d9a6a0342c67611c1114ef61495934c2e560f632c
@@ -82,11 +82,15 @@ cachelib==0.10.2 \
 celery[s3,sqs]==5.3.1 \
     --hash=sha256:27f8f3f3b58de6e0ab4f174791383bbd7445aff0471a43e99cfd77727940753f \
     --hash=sha256:f84d1c21a1520c116c2b7d26593926581191435a03aa74b77c941b93ca1c6210
-    # via wort (pyproject.toml)
+    # via
+    #   sentry-sdk
+    #   wort (pyproject.toml)
 certifi==2023.5.7 \
     --hash=sha256:0f0d56dc5a6ad56fd4ba36484d6cc34451e1c6548c61daad8c320169f91eddc7 \
     --hash=sha256:c6c2e98f5c7869efca1f8916fed228dd91539f9f1b444c314c06eef02980c716
-    # via requests
+    # via
+    #   requests
+    #   sentry-sdk
 charset-normalizer==3.1.0 \
     --hash=sha256:04afa6387e2b282cf78ff3dbce20f0cc071c12dc8f685bd40960cc68644cfea6 \
     --hash=sha256:04eefcee095f58eaabe6dc3cc2262f3bcd776d2c67005880894f447b3f2cb9c1 \
@@ -191,64 +195,18 @@ clickclick==20.10.2 \
     --hash=sha256:4efb13e62353e34c5eef7ed6582c4920b418d7dedc86d819e22ee089ba01802c \
     --hash=sha256:c8f33e6d9ec83f68416dd2136a7950125bd256ec39ccc9a85c6e280a16be2bb5
     # via connexion
-configargparse==1.5.3 \
-    --hash=sha256:18f6535a2db9f6e02bd5626cc7455eac3e96b9ab3d969d366f9aafd5c5c00fe7 \
-    --hash=sha256:1b0b3cbf664ab59dada57123c81eff3d9737e0d11d8cf79e3d6eb10823f1739f
-    # via snakemake
-connection-pool==0.0.3 \
-    --hash=sha256:bf429e7aef65921c69b4ed48f3d48d3eac1383b05d2df91884705842d974d0dc
-    # via snakemake
 connexion[swagger-ui]==2.14.2 \
     --hash=sha256:a73b96a0e07b16979a42cde7c7e26afe8548099e352cf350f80c57185e0e0b36 \
     --hash=sha256:dbc06f52ebeebcf045c9904d570f24377e8bbd5a6521caef15a06f634cf85646
     # via wort (pyproject.toml)
-datrie==0.8.2 \
-    --hash=sha256:0e3b76676abbae2368cce6bf605bb0ba7cfd11f2c420b96d67959f353d5d423f \
-    --hash=sha256:25e9e07ecfceaef78d23bde8d7278e4d6f63e1e3dc5ac00ccb4bec3062f0a8e0 \
-    --hash=sha256:2de594d84a2f43a09ddc15316a8afd48aae0fdc456f9279d0940aa59c473d9d5 \
-    --hash=sha256:31e316ba305cdd7b8a42f8e4af5a0a15a628aee270d2f392c41329a709eeda6d \
-    --hash=sha256:327d9c17efaebc66d1956dca047b76fdd0e5b989d63cb55b9038ec09d8769089 \
-    --hash=sha256:3a3e360a765cc95410898dc222f8585ea1b1bba0538a1af4d8630a5bc3ad6ee7 \
-    --hash=sha256:525b08f638d5cf6115df6ccd818e5a01298cd230b2dac91c8ff2e6499d18765d \
-    --hash=sha256:53969643e2794c37f024d5edaa42d5e6e2627d9937ddcc18d99128e9df700e4c \
-    --hash=sha256:651c63325056347b86c5de7ffeea8529230a5787c61ee6dcabc5b6c644bd3252 \
-    --hash=sha256:67603594f5db5c0029b1cf86a08e89cde015fe64cf0c4ae4e539c61114396729 \
-    --hash=sha256:6c9b333035312b79e6e9a10356d033e3d29aadbae6365007f706c854b3a94674 \
-    --hash=sha256:89ff3d41df4f899387aa07b4b066f5da36e3a10b67b8aeae631c950502ff4503 \
-    --hash=sha256:b07bd5fdfc3399a6dab86d6e35c72b1dbd598e80c97509c7c7518ab8774d3fda \
-    --hash=sha256:b2d80fa687173cb8f8bae224ef00d1ad6bda8f8597bbb1a63f85182c7d91aeb3 \
-    --hash=sha256:b6fd6c7c149b410a87d46072c1c98f6e87ec557802e1d0e09db7b858746e8550 \
-    --hash=sha256:bf5c956c0a9a9d0f07e3c8923746279171096de18a8a51685e22d9817f8755a6 \
-    --hash=sha256:bf9f34f7c63797219b32713b561c4f94e777ff6c22beecfcd6bdf6b6c25b8518 \
-    --hash=sha256:c783e2c1e28964b2b045a951eb9606833a188c4bd4a780da68d22f557e03e429 \
-    --hash=sha256:dbe04704eb41b8440ca61416d3670ca6ddeea847d19731cf121889bac2962d07 \
-    --hash=sha256:e0582435a4adef1a2fce53aeedb656bf769b0f113b524f98be51d3e3d40720cb \
-    --hash=sha256:e1d704ee4fdc03f02d7dacc4d92052dbd490dba551509fccfd8ee52c9039d4ad \
-    --hash=sha256:ee7cd8470a982356e104e62148f2dbe2d3e17545cafaa3ada29f2548984f1e89 \
-    --hash=sha256:f61cf2726f04c08828bfb4e7af698b0b16bdf2777c3993d042f2898b8e118f21 \
-    --hash=sha256:f826e843138698501cbf1a21233f724b851b1e475fad532b638ac5904e115f10 \
-    --hash=sha256:fa9f39ac88dc6286672b9dd286fe459646da48133c877a927af24803eaea441e
-    # via snakemake
 decorator==5.1.1 \
     --hash=sha256:637996211036b6385ef91435e4fae22989472f9d571faba8927ba8253acbc330 \
     --hash=sha256:b8c3f85900b9dc423225913c5aace94729fe1fa9763b38939a95226f02d37186
     # via ipython
-docutils==0.20.1 \
-    --hash=sha256:96f387a2c5562db4476f09f13bbab2192e764cac08ebbf3a34a95d9b1e4a59d6 \
-    --hash=sha256:f08a4e276c3a1583a86dce3e34aba3fe04d02bba2dd51ed16106244e8a923e3b
-    # via snakemake
-dpath==2.1.6 \
-    --hash=sha256:31407395b177ab63ef72e2f6ae268c15e938f2990a8ecf6510f5686c02b6db73 \
-    --hash=sha256:f1e07c72e8605c6a9e80b64bc8f42714de08a789c7de417e49c3f87a19692e47
-    # via yte
 executing==1.2.0 \
     --hash=sha256:0314a69e37426e3608aada02473b4161d4caf5a4b244d1d0c48072b8fee7bacc \
     --hash=sha256:19da64c18d2d851112f09c287f8d3dbbdf725ab0e569077efb6cdcbd3497c107
     # via stack-data
-fastjsonschema==2.17.1 \
-    --hash=sha256:4b90b252628ca695280924d863fe37234eebadc29c5360d322571233dc9746e0 \
-    --hash=sha256:f4eeb8a77cef54861dbf7424ac8ce71306f12cbb086c45131bcba2c6a4f726e3
-    # via nbformat
 flask==2.2.5 \
     --hash=sha256:58107ed83443e86067e41eff4631b058178191a355886f8e479e347fa1285fdf \
     --hash=sha256:edee9b0a7ff26621bd5a8c10ff484ae28737a2410d99b0bb9a6850c7fb977aa0
@@ -259,6 +217,7 @@ flask==2.2.5 \
     #   flask-shell-ipython
     #   flask-sqlalchemy
     #   flask-wtf
+    #   sentry-sdk
     #   wort (pyproject.toml)
 flask-login==0.6.2 \
     --hash=sha256:1ef79843f5eddd0f143c2cd994c1b05ac83c0401dc6234c143495af9a939613f \
@@ -279,14 +238,6 @@ flask-wtf==1.1.1 \
     --hash=sha256:41c4244e9ae626d63bed42ae4785b90667b885b1535d5a4095e1f63060d12aa9 \
     --hash=sha256:7887d6f1ebb3e17bf648647422f0944c9a469d0fcf63e3b66fb9a83037e38b2c
     # via wort (pyproject.toml)
-gitdb==4.0.10 \
-    --hash=sha256:6eb990b69df4e15bad899ea868dc46572c3f75339735663b81de79b06f17eb9a \
-    --hash=sha256:c286cf298426064079ed96a9e4a9d39e7f3e9bf15ba60701e95f5492f28415c7
-    # via gitpython
-gitpython==3.1.31 \
-    --hash=sha256:8ce3bcf69adfdf7c7d503e78fd3b1c492af782d58893b650adb2ac8912ddd573 \
-    --hash=sha256:f04893614f6aa713a60cbbe1e6a97403ef633103cdd0ef5eb6efe0deb98dbe8d
-    # via snakemake
 greenlet==2.0.2 \
     --hash=sha256:03a8f4f3430c3b3ff8d10a2a86028c660355ab637cee9333d63d66b56f09d52a \
     --hash=sha256:0bf60faf0bc2468089bdc5edd10555bab6e85152191df713e2ab1fcc86382b5a \
@@ -353,10 +304,6 @@ gunicorn==20.1.0 \
     --hash=sha256:9dcc4547dbb1cb284accfb15ab5667a0e5d1881cc443e0677b4882a4067a807e \
     --hash=sha256:e0a968b5ba15f8a328fdfd7ab1fcb5af4470c28aaf7e55df02a99bc13138e6e8
     # via wort (pyproject.toml)
-humanfriendly==10.0 \
-    --hash=sha256:1697e1a8a8f550fd43c2865cd84542fc175a61dcb779b6fee18cf6b6ccba1477 \
-    --hash=sha256:6b0b831ce8f15f7300721aa49829fc4e83921a9a301cc7f606be6686a2288ddc
-    # via snakemake
 idna==3.4 \
     --hash=sha256:814f528e8dead7d329833b91c5faa87d60bf71824cd12a7530b5526063d02cb4 \
     --hash=sha256:90b77e79eaa3eba6de819a0c442c0b4ceefc341a7a2ab77d7562bf49f425c5c2
@@ -385,7 +332,6 @@ jinja2==3.1.2 \
     --hash=sha256:6088930bfe239f0e6710546ab9c19c9ef35e29792895fed6e6e31a023a182a61
     # via
     #   flask
-    #   snakemake
     #   swagger-ui-bundle
 jmespath==1.0.1 \
     --hash=sha256:02e2e4cc71b5bcab88332eebf907519190dd9e6e82107fa7f83b1003a6252980 \
@@ -399,22 +345,16 @@ jsonschema==4.17.3 \
     # via
     #   connexion
     #   jsonschema-spec
-    #   nbformat
     #   openapi-schema-validator
     #   openapi-spec-validator
-    #   snakemake
     #   wort (pyproject.toml)
 jsonschema-spec==0.1.6 \
     --hash=sha256:90215863b56e212086641956b20127ccbf6d8a3a38343dad01d6a74d19482f76 \
     --hash=sha256:f2206d18c89d1824c1f775ba14ed039743b41a9167bd2c5bdb774b66b3ca0bbf
     # via openapi-spec-validator
-jupyter-core==5.3.1 \
-    --hash=sha256:5ba5c7938a7f97a6b0481463f7ff0dbac7c15ba48cf46fa4035ca6e838aa1aba \
-    --hash=sha256:ae9036db959a71ec1cac33081eeb040a79e681f08ab68b0883e9a676c7a90dce
-    # via nbformat
-kombu[sqs]==5.3.2 \
-    --hash=sha256:0ba213f630a2cb2772728aef56ac6883dc3a2f13435e10048f6e97d48506dbbd \
-    --hash=sha256:b753c9cfc9b1e976e637a7cbc1a65d446a22e45546cd996ea28f932082b7dc9e
+kombu[sqs]==5.3.4 \
+    --hash=sha256:0bb2e278644d11dea6272c17974a3dbb9688a949f3bb60aeb5b791329c44fadc \
+    --hash=sha256:63bb093fc9bb80cfb3a0972336a5cec1fa7ac5f9ef7e8237c6bf8dda9469313e
     # via celery
 lazy-object-proxy==1.9.0 \
     --hash=sha256:09763491ce220c0299688940f8dc2c5d05fd1f45af1e42e636b2e8b2303e4382 \
@@ -512,16 +452,13 @@ markupsafe==2.1.3 \
     # via
     #   jinja2
     #   mako
+    #   sentry-sdk
     #   werkzeug
     #   wtforms
 matplotlib-inline==0.1.6 \
     --hash=sha256:f1f41aab5328aa5aaea9b16d083b128102f8712542f819fe7e6a420ff581b311 \
     --hash=sha256:f887e5f10ba98e8d2b150ddcf4702c1e5f8b3a20005eb0f74bfdbd360ee6f304
     # via ipython
-nbformat==5.9.0 \
-    --hash=sha256:8c8fa16d6d05062c26177754bfbfac22de644888e2ef69d27ad2a334cf2576e5 \
-    --hash=sha256:e98ebb6120c3efbafdee2a40af2a140cadee90bb06dd69a2a63d9551fcc7f976
-    # via snakemake
 numpy==1.25.2 \
     --hash=sha256:0d60fbae8e0019865fc4784745814cff1c421df5afee233db6d88ab4f14655a2 \
     --hash=sha256:1a1329e26f46230bf77b02cc19e900db9b52f398d6722ca853349a782d4cff55 \
@@ -606,36 +543,12 @@ pickleshare==0.7.5 \
     --hash=sha256:87683d47965c1da65cdacaf31c8441d12b8044cdec9aca500cd78fc2c683afca \
     --hash=sha256:9649af414d74d4df115d5d718f82acb59c9d418196b7b4290ed47a12ce62df56
     # via ipython
-plac==1.3.5 \
-    --hash=sha256:38bdd864d0450fb748193aa817b9c458a8f5319fbf97b2261151cfc0a5812090 \
-    --hash=sha256:a8933d21a40fe2cec177a2f96217425a4e889d275aa3e25ecf9a9640ab16d416
-    # via yte
-platformdirs==3.6.0 \
-    --hash=sha256:57e28820ca8094678b807ff529196506d7a21e17156cb1cddb3e74cebce54640 \
-    --hash=sha256:ffa199e3fbab8365778c4a10e1fbf1b9cd50707de826eb304b50e57ec0cc8d38
-    # via jupyter-core
 prompt-toolkit==3.0.38 \
     --hash=sha256:23ac5d50538a9a38c8bde05fecb47d0b403ecd0662857a86f886f798563d5b9b \
     --hash=sha256:45ea77a2f7c60418850331366c81cf6b5b9cf4c7fd34616f733c5427e6abbb1f
     # via
     #   click-repl
     #   ipython
-psutil==5.9.5 \
-    --hash=sha256:104a5cc0e31baa2bcf67900be36acde157756b9c44017b86b2c049f11957887d \
-    --hash=sha256:3c6f686f4225553615612f6d9bc21f1c0e305f75d7d8454f9b46e901778e7217 \
-    --hash=sha256:4aef137f3345082a3d3232187aeb4ac4ef959ba3d7c10c33dd73763fbc063da4 \
-    --hash=sha256:5410638e4df39c54d957fc51ce03048acd8e6d60abc0f5107af51e5fb566eb3c \
-    --hash=sha256:5b9b8cb93f507e8dbaf22af6a2fd0ccbe8244bf30b1baad6b3954e935157ae3f \
-    --hash=sha256:7a7dd9997128a0d928ed4fb2c2d57e5102bb6089027939f3b722f3a210f9a8da \
-    --hash=sha256:89518112647f1276b03ca97b65cc7f64ca587b1eb0278383017c2a0dcc26cbe4 \
-    --hash=sha256:8c5f7c5a052d1d567db4ddd231a9d27a74e8e4a9c3f44b1032762bd7b9fdcd42 \
-    --hash=sha256:ab8ed1a1d77c95453db1ae00a3f9c50227ebd955437bcf2a574ba8adbf6a74d5 \
-    --hash=sha256:acf2aef9391710afded549ff602b5887d7a2349831ae4c26be7c807c0a39fac4 \
-    --hash=sha256:b258c0c1c9d145a1d5ceffab1134441c4c5113b2417fafff7315a917a026c3c9 \
-    --hash=sha256:be8929ce4313f9f8146caad4272f6abb8bf99fc6cf59344a3167ecd74f4f203f \
-    --hash=sha256:c607bb3b57dc779d55e1554846352b4e358c10fff3abf3514a7a6601beebdb30 \
-    --hash=sha256:ea8518d152174e1249c4f2a1c89e3e6065941df2fa13a1ab45327716a23c2b48
-    # via snakemake
 psycopg2-binary==2.9.6 \
     --hash=sha256:02c0f3757a4300cf379eb49f543fb7ac527fb00144d39246ee40e1df684ab514 \
     --hash=sha256:02c6e3cf3439e213e4ee930308dc122d6fb4d4bea9aef4a12535fbd605d1a2fe \
@@ -704,10 +617,6 @@ ptyprocess==0.7.0 \
     --hash=sha256:4b41f3967fce3af57cc7e94b888626c18bf37a083e3651ca8feeb66d492fef35 \
     --hash=sha256:5c5d0a3b48ceee0b48485e0c26037c0acd7d29765ca3fbb5cb3831d347423220
     # via pexpect
-pulp==2.7.0 \
-    --hash=sha256:b6de42c929e80325bf44cc7a2997f02535440800c376b9eb8cb7b4670ed53769 \
-    --hash=sha256:e73ee6b32d639c9b8cf4b4aded334ba158be5f8313544e056f796ace0a10ae63
-    # via snakemake
 pure-eval==0.2.2 \
     --hash=sha256:01eaab343580944bc56080ebe0a674b39ec44a945e6d09ba7db3cb8cec289350 \
     --hash=sha256:2b45320af6dfaa1750f543d714b6d1c520a1688dec6fd24d339063ce0aaa9ac3
@@ -807,8 +716,6 @@ pyyaml==6.0 \
     #   clickclick
     #   connexion
     #   jsonschema-spec
-    #   snakemake
-    #   yte
 redis==4.5.5 \
     --hash=sha256:77929bc7f5dab9adf3acba2d3bb7d7658f1e0c2f1cafe7eb36434e751c471119 \
     --hash=sha256:dc87a0bdef6c8bfe1ef1e1c40be7034390c2ae02d92dcd0c7ca1729443899880
@@ -819,11 +726,6 @@ requests==2.31.0 \
     # via
     #   connexion
     #   jsonschema-spec
-    #   snakemake
-reretry==0.11.8 \
-    --hash=sha256:5ec1084cd9644271ee386d34cd5dd24bdb3e91d55961b076d1a31d585ad68a79 \
-    --hash=sha256:f2791fcebe512ea2f1d153a2874778523a8064860b591cd90afc21a8bed432e3
-    # via snakemake
 rfc3339-validator==0.1.4 \
     --hash=sha256:138a2abdf93304ad60530167e51d2dfb9549521a836871b88d7f4695d0022f6b \
     --hash=sha256:24f6ec1eda14ef823da9e36ec7113124b39c04d50a4d3d3a3c2859577e7791fa
@@ -832,6 +734,10 @@ s3transfer==0.6.1 \
     --hash=sha256:3c0da2d074bf35d6870ef157158641178a4204a6e689e82546083e31e0311346 \
     --hash=sha256:640bb492711f4c0c0905e1f62b6aaeb771881935ad27884852411f8e9cacbca9
     # via boto3
+sentry-sdk[celery,flask,sqlalchemy]==1.39.1 \
+    --hash=sha256:320a55cdf9da9097a0bead239c35b7e61f53660ef9878861824fd6d9b2eaf3b5 \
+    --hash=sha256:81b5b9ffdd1a374e9eb0c053b5d2012155db9cbe76393a8585677b753bd5fdc1
+    # via wort (pyproject.toml)
 six==1.16.0 \
     --hash=sha256:1e61c37477a1626458e36f7b1d82aa5c9b094fa4802892072e49de9c60c4c926 \
     --hash=sha256:8abb2f1d86890a2dfb989f9a77cfcfd3e47c2a354b01111771326f8aa26e0254
@@ -839,18 +745,6 @@ six==1.16.0 \
     #   asttokens
     #   python-dateutil
     #   rfc3339-validator
-smart-open==6.3.0 \
-    --hash=sha256:b4c9ae193ad6d3e7add50944b86afa0d150bd821ab8ec21edb26d9a06b66f6a8 \
-    --hash=sha256:d5238825fe9a9340645fac3d75b287c08fbb99fb2b422477de781c9f5f09e019
-    # via snakemake
-smmap==5.0.0 \
-    --hash=sha256:2aba19d6a040e78d8b09de5c57e96207b09ed71d8e55ce0959eeee6c8e190d94 \
-    --hash=sha256:c840e62059cd3be204b0c9c9f74be2c09d5648eddd4580d9314c3ecde0b30936
-    # via gitdb
-snakemake==7.28.3 \
-    --hash=sha256:4d0d5f9643d97154cd8925830bdb3922e4bd9cfcf7f8b619df75e4ddfdbc3f9e \
-    --hash=sha256:b16e2ab7145cc0f791a49f27fe5335dfeed295bbc43400501b8bb92328fecd2e
-    # via wort (pyproject.toml)
 sqlalchemy==2.0.16 \
     --hash=sha256:0db6734cb5644c55d0262a813b764c6e2cda1e66e939a488b3d6298cdc7344c2 \
     --hash=sha256:0e4645b260cfe375a0603aa117f0a47680864cf37833129da870919e88b08d8f \
@@ -896,37 +790,21 @@ sqlalchemy==2.0.16 \
     # via
     #   alembic
     #   flask-sqlalchemy
+    #   sentry-sdk
 stack-data==0.6.2 \
     --hash=sha256:32d2dd0376772d01b6cb9fc996f3c8b57a357089dec328ed4b6553d037eaf815 \
     --hash=sha256:cbb2a53eb64e5785878201a97ed7c7b94883f48b87bfb0bbe8b623c74679e4a8
     # via ipython
-stopit==1.1.2 \
-    --hash=sha256:f7f39c583fd92027bd9d06127b259aee7a5b7945c1f1fa56263811e1e766996d
-    # via snakemake
 swagger-ui-bundle==0.0.9 \
     --hash=sha256:b462aa1460261796ab78fd4663961a7f6f347ce01760f1303bbbdf630f11f516 \
     --hash=sha256:cea116ed81147c345001027325c1ddc9ca78c1ee7319935c3c75d3669279d575
     # via connexion
-tabulate==0.9.0 \
-    --hash=sha256:0095b12bf5966de529c0feb1fa08671671b3368eec77d7ef7ab114be2c068b3c \
-    --hash=sha256:024ca478df22e9340661486f85298cff5f6dcdba14f3813e8830015b9ed1948f
-    # via snakemake
-throttler==1.2.2 \
-    --hash=sha256:d54db406d98e1b54d18a9ba2b31ab9f093ac64a0a59d730c1cf7bb1cdfc94a58 \
-    --hash=sha256:fc6ae612a2529e01110b32335af40375258b98e3b81232ec77cd07f51bf71392
-    # via snakemake
-toposort==1.10 \
-    --hash=sha256:bfbb479c53d0a696ea7402601f4e693c97b0367837c8898bc6471adfca37a6bd \
-    --hash=sha256:cbdbc0d0bee4d2695ab2ceec97fe0679e9c10eab4b2a87a9372b929e70563a87
-    # via snakemake
 traitlets==5.9.0 \
     --hash=sha256:9e6ec080259b9a5940c797d58b613b5e31441c2257b87c2e795c5228ae80d2d8 \
     --hash=sha256:f6cde21a9c68cf756af02035f72d5a723bf607e862e7be33ece505abf4a3bad9
     # via
     #   ipython
-    #   jupyter-core
     #   matplotlib-inline
-    #   nbformat
 typing-extensions==4.6.3 \
     --hash=sha256:88a4153d8505aabbb4e13aacb7c486c2b4a33ca3b3f807914a9b4c844c471c26 \
     --hash=sha256:d91d5919357fe7f681a9f2b5b4cb2a5f1ef0a1e9f59c4d8ff0d3491e05c0ffd5
@@ -947,6 +825,7 @@ urllib3==1.26.16 \
     #   celery
     #   kombu
     #   requests
+    #   sentry-sdk
 vine==5.0.0 \
     --hash=sha256:4c9dceab6f76ed92105027c49c823800dd33cacce13bdedc5b914e3514b7fb30 \
     --hash=sha256:7d3b1624a953da82ef63462013bbd271d3eb75751489f9807598e8f340bd637e
@@ -965,91 +844,10 @@ werkzeug==2.2.3 \
     #   connexion
     #   flask
     #   flask-login
-wrapt==1.15.0 \
-    --hash=sha256:02fce1852f755f44f95af51f69d22e45080102e9d00258053b79367d07af39c0 \
-    --hash=sha256:077ff0d1f9d9e4ce6476c1a924a3332452c1406e59d90a2cf24aeb29eeac9420 \
-    --hash=sha256:078e2a1a86544e644a68422f881c48b84fef6d18f8c7a957ffd3f2e0a74a0d4a \
-    --hash=sha256:0970ddb69bba00670e58955f8019bec4a42d1785db3faa043c33d81de2bf843c \
-    --hash=sha256:1286eb30261894e4c70d124d44b7fd07825340869945c79d05bda53a40caa079 \
-    --hash=sha256:21f6d9a0d5b3a207cdf7acf8e58d7d13d463e639f0c7e01d82cdb671e6cb7923 \
-    --hash=sha256:230ae493696a371f1dbffaad3dafbb742a4d27a0afd2b1aecebe52b740167e7f \
-    --hash=sha256:26458da5653aa5b3d8dc8b24192f574a58984c749401f98fff994d41d3f08da1 \
-    --hash=sha256:2cf56d0e237280baed46f0b5316661da892565ff58309d4d2ed7dba763d984b8 \
-    --hash=sha256:2e51de54d4fb8fb50d6ee8327f9828306a959ae394d3e01a1ba8b2f937747d86 \
-    --hash=sha256:2fbfbca668dd15b744418265a9607baa970c347eefd0db6a518aaf0cfbd153c0 \
-    --hash=sha256:38adf7198f8f154502883242f9fe7333ab05a5b02de7d83aa2d88ea621f13364 \
-    --hash=sha256:3a8564f283394634a7a7054b7983e47dbf39c07712d7b177b37e03f2467a024e \
-    --hash=sha256:3abbe948c3cbde2689370a262a8d04e32ec2dd4f27103669a45c6929bcdbfe7c \
-    --hash=sha256:3bbe623731d03b186b3d6b0d6f51865bf598587c38d6f7b0be2e27414f7f214e \
-    --hash=sha256:40737a081d7497efea35ab9304b829b857f21558acfc7b3272f908d33b0d9d4c \
-    --hash=sha256:41d07d029dd4157ae27beab04d22b8e261eddfc6ecd64ff7000b10dc8b3a5727 \
-    --hash=sha256:46ed616d5fb42f98630ed70c3529541408166c22cdfd4540b88d5f21006b0eff \
-    --hash=sha256:493d389a2b63c88ad56cdc35d0fa5752daac56ca755805b1b0c530f785767d5e \
-    --hash=sha256:4ff0d20f2e670800d3ed2b220d40984162089a6e2c9646fdb09b85e6f9a8fc29 \
-    --hash=sha256:54accd4b8bc202966bafafd16e69da9d5640ff92389d33d28555c5fd4f25ccb7 \
-    --hash=sha256:56374914b132c702aa9aa9959c550004b8847148f95e1b824772d453ac204a72 \
-    --hash=sha256:578383d740457fa790fdf85e6d346fda1416a40549fe8db08e5e9bd281c6a475 \
-    --hash=sha256:58d7a75d731e8c63614222bcb21dd992b4ab01a399f1f09dd82af17bbfc2368a \
-    --hash=sha256:5c5aa28df055697d7c37d2099a7bc09f559d5053c3349b1ad0c39000e611d317 \
-    --hash=sha256:5fc8e02f5984a55d2c653f5fea93531e9836abbd84342c1d1e17abc4a15084c2 \
-    --hash=sha256:63424c681923b9f3bfbc5e3205aafe790904053d42ddcc08542181a30a7a51bd \
-    --hash=sha256:64b1df0f83706b4ef4cfb4fb0e4c2669100fd7ecacfb59e091fad300d4e04640 \
-    --hash=sha256:74934ebd71950e3db69960a7da29204f89624dde411afbfb3b4858c1409b1e98 \
-    --hash=sha256:75669d77bb2c071333417617a235324a1618dba66f82a750362eccbe5b61d248 \
-    --hash=sha256:75760a47c06b5974aa5e01949bf7e66d2af4d08cb8c1d6516af5e39595397f5e \
-    --hash=sha256:76407ab327158c510f44ded207e2f76b657303e17cb7a572ffe2f5a8a48aa04d \
-    --hash=sha256:76e9c727a874b4856d11a32fb0b389afc61ce8aaf281ada613713ddeadd1cfec \
-    --hash=sha256:77d4c1b881076c3ba173484dfa53d3582c1c8ff1f914c6461ab70c8428b796c1 \
-    --hash=sha256:780c82a41dc493b62fc5884fb1d3a3b81106642c5c5c78d6a0d4cbe96d62ba7e \
-    --hash=sha256:7dc0713bf81287a00516ef43137273b23ee414fe41a3c14be10dd95ed98a2df9 \
-    --hash=sha256:7eebcdbe3677e58dd4c0e03b4f2cfa346ed4049687d839adad68cc38bb559c92 \
-    --hash=sha256:896689fddba4f23ef7c718279e42f8834041a21342d95e56922e1c10c0cc7afb \
-    --hash=sha256:96177eb5645b1c6985f5c11d03fc2dbda9ad24ec0f3a46dcce91445747e15094 \
-    --hash=sha256:96e25c8603a155559231c19c0349245eeb4ac0096fe3c1d0be5c47e075bd4f46 \
-    --hash=sha256:9d37ac69edc5614b90516807de32d08cb8e7b12260a285ee330955604ed9dd29 \
-    --hash=sha256:9ed6aa0726b9b60911f4aed8ec5b8dd7bf3491476015819f56473ffaef8959bd \
-    --hash=sha256:a487f72a25904e2b4bbc0817ce7a8de94363bd7e79890510174da9d901c38705 \
-    --hash=sha256:a4cbb9ff5795cd66f0066bdf5947f170f5d63a9274f99bdbca02fd973adcf2a8 \
-    --hash=sha256:a74d56552ddbde46c246b5b89199cb3fd182f9c346c784e1a93e4dc3f5ec9975 \
-    --hash=sha256:a89ce3fd220ff144bd9d54da333ec0de0399b52c9ac3d2ce34b569cf1a5748fb \
-    --hash=sha256:abd52a09d03adf9c763d706df707c343293d5d106aea53483e0ec8d9e310ad5e \
-    --hash=sha256:abd8f36c99512755b8456047b7be10372fca271bf1467a1caa88db991e7c421b \
-    --hash=sha256:af5bd9ccb188f6a5fdda9f1f09d9f4c86cc8a539bd48a0bfdc97723970348418 \
-    --hash=sha256:b02f21c1e2074943312d03d243ac4388319f2456576b2c6023041c4d57cd7019 \
-    --hash=sha256:b06fa97478a5f478fb05e1980980a7cdf2712015493b44d0c87606c1513ed5b1 \
-    --hash=sha256:b0724f05c396b0a4c36a3226c31648385deb6a65d8992644c12a4963c70326ba \
-    --hash=sha256:b130fe77361d6771ecf5a219d8e0817d61b236b7d8b37cc045172e574ed219e6 \
-    --hash=sha256:b56d5519e470d3f2fe4aa7585f0632b060d532d0696c5bdfb5e8319e1d0f69a2 \
-    --hash=sha256:b67b819628e3b748fd3c2192c15fb951f549d0f47c0449af0764d7647302fda3 \
-    --hash=sha256:ba1711cda2d30634a7e452fc79eabcadaffedf241ff206db2ee93dd2c89a60e7 \
-    --hash=sha256:bbeccb1aa40ab88cd29e6c7d8585582c99548f55f9b2581dfc5ba68c59a85752 \
-    --hash=sha256:bd84395aab8e4d36263cd1b9308cd504f6cf713b7d6d3ce25ea55670baec5416 \
-    --hash=sha256:c99f4309f5145b93eca6e35ac1a988f0dc0a7ccf9ccdcd78d3c0adf57224e62f \
-    --hash=sha256:ca1cccf838cd28d5a0883b342474c630ac48cac5df0ee6eacc9c7290f76b11c1 \
-    --hash=sha256:cd525e0e52a5ff16653a3fc9e3dd827981917d34996600bbc34c05d048ca35cc \
-    --hash=sha256:cdb4f085756c96a3af04e6eca7f08b1345e94b53af8921b25c72f096e704e145 \
-    --hash=sha256:ce42618f67741d4697684e501ef02f29e758a123aa2d669e2d964ff734ee00ee \
-    --hash=sha256:d06730c6aed78cee4126234cf2d071e01b44b915e725a6cb439a879ec9754a3a \
-    --hash=sha256:d5fe3e099cf07d0fb5a1e23d399e5d4d1ca3e6dfcbe5c8570ccff3e9208274f7 \
-    --hash=sha256:d6bcbfc99f55655c3d93feb7ef3800bd5bbe963a755687cbf1f490a71fb7794b \
-    --hash=sha256:d787272ed958a05b2c86311d3a4135d3c2aeea4fc655705f074130aa57d71653 \
-    --hash=sha256:e169e957c33576f47e21864cf3fc9ff47c223a4ebca8960079b8bd36cb014fd0 \
-    --hash=sha256:e20076a211cd6f9b44a6be58f7eeafa7ab5720eb796975d0c03f05b47d89eb90 \
-    --hash=sha256:e826aadda3cae59295b95343db8f3d965fb31059da7de01ee8d1c40a60398b29 \
-    --hash=sha256:eef4d64c650f33347c1f9266fa5ae001440b232ad9b98f1f43dfe7a79435c0a6 \
-    --hash=sha256:f2e69b3ed24544b0d3dbe2c5c0ba5153ce50dcebb576fdc4696d52aa22db6034 \
-    --hash=sha256:f87ec75864c37c4c6cb908d282e1969e79763e0d9becdfe9fe5473b7bb1e5f09 \
-    --hash=sha256:fbec11614dba0424ca72f4e8ba3c420dba07b4a7c206c8c8e4e73f2e98f4c559 \
-    --hash=sha256:fd69666217b62fa5d7c6aa88e507493a34dec4fa20c5bd925e4bc12fce586639
-    # via snakemake
 wtforms==3.0.1 \
     --hash=sha256:6b351bbb12dd58af57ffef05bc78425d08d1914e0fd68ee14143b7ade023c5bc \
     --hash=sha256:837f2f0e0ca79481b92884962b914eba4e72b7a2daaf1f939c890ed0124b834b
     # via flask-wtf
-yte==1.5.1 \
-    --hash=sha256:6d0b315b78af83276d78f5f67c107c84238f772a76d74f4fc77905b46f3731f5 \
-    --hash=sha256:fd646bc47c355f202f14b7476996de4a31501cf1e107ac7ad8e19edcd786d30b
-    # via snakemake
 
 # WARNING: The following packages were not pinned, but pip requires them to be
 # pinned when the requirements file includes hashes. Consider using the --allow-unsafe flag.
diff --git a/wort/app.py b/wort/app.py
index faffe67..f96339b 100644
--- a/wort/app.py
+++ b/wort/app.py
@@ -44,6 +44,16 @@ def create_app(settings_override=None):
     :param settings_override: Override settings
     :return: Flask app
     """
+    ### Init sentry
+    import sentry_sdk
+    from sentry_sdk.integrations.redis import RedisIntegration
+    sentry_sdk.init(
+        enable_tracing=True,
+        traces_sample_rate=1.0,
+        profiles_sample_rate=1.0,
+    )
+    #################
+
     app = connexion.App(__name__, options={"swagger_ui": True, "serve_spec": True})
     app.add_api("api.yaml")
 
diff --git a/wort/blueprints/compute/tasks.py b/wort/blueprints/compute/tasks.py
index 82d1b7e..63c83e9 100644
--- a/wort/blueprints/compute/tasks.py
+++ b/wort/blueprints/compute/tasks.py
@@ -2,7 +2,7 @@
 import os
 import shutil
 from io import BytesIO
-from subprocess import CalledProcessError
+from subprocess import run, CalledProcessError
 from tempfile import NamedTemporaryFile
 
 from celery.exceptions import Ignore
@@ -16,7 +16,6 @@
 def compute(sra_id):
     import boto3
     import botocore
-    from snakemake import shell
 
     conn = boto3.client("s3")
     s3 = boto3.resource("s3")
@@ -37,21 +36,28 @@ def compute(sra_id):
 
     with NamedTemporaryFile("w+b") as f:
         try:
-            shell(
-                "fastq-dump --disable-multithreading --fasta 0 --skip-technical --readids --read-filter pass --dumpbase --split-spot --clip -Z {sra_id} | "
+            run(
+                "set -euo pipefail; "
+                f"fastq-dump --disable-multithreading --fasta 0 --skip-technical --readids --read-filter pass --dumpbase --split-spot --clip -Z {sra_id} | "
                 "sourmash compute -k 21,31,51 "
                 "  --scaled 1000 "
                 "  --track-abundance "
-                "  --name {sra_id} "
-                "  -o {output} "
-                "  - ".format(sra_id=sra_id, output=f.name)
+                f"  --name {sra_id} "
+                f"  -o {f.name} "
+                "  - ",
+                shell=True, capture_output=True, check=True,
             )
         except CalledProcessError as e:
+            if e.returncode == 3:
+                # Happens when fastq-dump can't find an accession
+                # (might have been removed, redacted, or never uploaded)
+                pass
+
             # We ignore SIGPIPE, since it is informational (and makes sense,
             # it happens because `head` is closed and `fastq-dump` can't pipe
             # its output anymore. More details:
             # http://www.pixelbeat.org/programming/sigpipe_handling.html
-            if e.returncode != 141:
+            elif e.returncode != 141:
                 raise e
 
         f.seek(0)
@@ -73,7 +79,6 @@ def compute(sra_id):
 def compute_genomes(accession, path, name):
     import boto3
     import botocore
-    from snakemake import shell
 
     conn = boto3.client("s3")
     s3 = boto3.resource("s3")
@@ -94,13 +99,15 @@ def compute_genomes(accession, path, name):
 
     with NamedTemporaryFile("w+b") as f:
         try:
-            shell(
-               f"sourmash compute -k 21,31,51 "
+            run(
+                "set -euo pipefail; "
+                "sourmash compute -k 21,31,51 "
                 "  --scaled 1000 "
                 "  --track-abundance "
                 "  --name {name:q} "
-                "  -o {f.name} "
-                "  <(curl {path})"
+                f"  -o {f.name} "
+                f"  <(curl {path})",
+                shell=True, capture_output=True, check=True,
             )
         except CalledProcessError as e:
             # We ignore SIGPIPE, since it is informational (and makes sense,