From 29e528f73b864d8cf41277818298b62dc0d0033a Mon Sep 17 00:00:00 2001 From: "pre-commit-ci[bot]" <66853113+pre-commit-ci[bot]@users.noreply.github.com> Date: Mon, 23 Dec 2024 17:04:39 +0000 Subject: [PATCH 1/2] [pre-commit.ci] pre-commit autoupdate MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit updates: - [github.com/astral-sh/ruff-pre-commit: v0.8.3 → v0.8.4](https://github.com/astral-sh/ruff-pre-commit/compare/v0.8.3...v0.8.4) --- .pre-commit-config.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 9977eea..c5d2584 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -15,7 +15,7 @@ repos: hooks: - id: pyproject-fmt - repo: https://github.com/astral-sh/ruff-pre-commit - rev: v0.8.3 + rev: v0.8.4 hooks: - id: ruff types_or: [python, pyi, jupyter] From 012d6e98c3fd3564b431400ee1d2e062863870f8 Mon Sep 17 00:00:00 2001 From: "pre-commit-ci[bot]" <66853113+pre-commit-ci[bot]@users.noreply.github.com> Date: Mon, 23 Dec 2024 17:04:47 +0000 Subject: [PATCH 2/2] [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci --- CHANGELOG.md | 194 +++++++++++++++++++++++++-------------------------- 1 file changed, 97 insertions(+), 97 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 582c082..166272e 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -9,128 +9,128 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0 ### Changed -- 📝 Update readme by @srivarra -- 📝 Adjusted theme by @srivarra -- Update README.md by @srivarra +- 📝 Update readme by @srivarra +- 📝 Adjusted theme by @srivarra +- Update README.md by @srivarra ## [0.0.4] - 2024-12-21 ### Changed -- 💚 Missed one pypi-publish by @srivarra -- 💚 Bump gh-action-pypi-publish to 1.12.3 by @srivarra +- 💚 Missed one pypi-publish by @srivarra +- 💚 Bump gh-action-pypi-publish to 1.12.3 by @srivarra ## [0.0.3] - 2024-12-21 ### Changed -- Api documentation fix by @srivarra -- Update README.md example by @srivarra -- Merge pull request #16 from srivarra/ops/groupby by @srivarra in [#16](https://github.com/srivarra/annsel/pull/16) -- 📌 Pin doc deps: scanpy, numba, llvmlite to release canidates by @srivarra -- 💚 Update CI actions by @srivarra -- ⬆️ Some random numpy 2 with python 3.13 issues by @srivarra -- Merge branch 'main' into ops/groupby by @srivarra -- Merge pull request #20 from srivarra/pre-commit-ci-update-config by @srivarra in [#20](https://github.com/srivarra/annsel/pull/20) -- [pre-commit.ci] auto fixes from pre-commit.com hooks by @pre-commit-ci[bot] -- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci[bot] -- Update README.md by @srivarra -- Merge pull request #19 from srivarra/pre-commit-ci-update-config by @srivarra in [#19](https://github.com/srivarra/annsel/pull/19) -- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci[bot] -- Merge pull request #18 from srivarra/pre-commit-ci-update-config by @srivarra in [#18](https://github.com/srivarra/annsel/pull/18) -- [pre-commit.ci] auto fixes from pre-commit.com hooks by @pre-commit-ci[bot] -- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci[bot] -- ♻️ Refactor col expressions by @srivarra -- 🚸 Updating api by @srivarra -- ⬆️ Update tqdm by @srivarra -- Merge branch 'main' into ops/groupby by @srivarra -- Merge pull request #17 from srivarra/pre-commit-ci-update-config by @srivarra in [#17](https://github.com/srivarra/annsel/pull/17) -- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci[bot] -- ✨ Added Groupby by @srivarra -- Merge pull request #15 from srivarra/ops/select by @srivarra in [#15](https://github.com/srivarra/annsel/pull/15) -- ✨ Add select by @srivarra -- Update README.md by @srivarra -- 💚 Set uv sync --frozen by @srivarra +- Api documentation fix by @srivarra +- Update README.md example by @srivarra +- Merge pull request #16 from srivarra/ops/groupby by @srivarra in [#16](https://github.com/srivarra/annsel/pull/16) +- 📌 Pin doc deps: scanpy, numba, llvmlite to release canidates by @srivarra +- 💚 Update CI actions by @srivarra +- ⬆️ Some random numpy 2 with python 3.13 issues by @srivarra +- Merge branch 'main' into ops/groupby by @srivarra +- Merge pull request #20 from srivarra/pre-commit-ci-update-config by @srivarra in [#20](https://github.com/srivarra/annsel/pull/20) +- [pre-commit.ci] auto fixes from pre-commit.com hooks by @pre-commit-ci[bot] +- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci[bot] +- Update README.md by @srivarra +- Merge pull request #19 from srivarra/pre-commit-ci-update-config by @srivarra in [#19](https://github.com/srivarra/annsel/pull/19) +- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci[bot] +- Merge pull request #18 from srivarra/pre-commit-ci-update-config by @srivarra in [#18](https://github.com/srivarra/annsel/pull/18) +- [pre-commit.ci] auto fixes from pre-commit.com hooks by @pre-commit-ci[bot] +- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci[bot] +- ♻️ Refactor col expressions by @srivarra +- 🚸 Updating api by @srivarra +- ⬆️ Update tqdm by @srivarra +- Merge branch 'main' into ops/groupby by @srivarra +- Merge pull request #17 from srivarra/pre-commit-ci-update-config by @srivarra in [#17](https://github.com/srivarra/annsel/pull/17) +- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci[bot] +- ✨ Added Groupby by @srivarra +- Merge pull request #15 from srivarra/ops/select by @srivarra in [#15](https://github.com/srivarra/annsel/pull/15) +- ✨ Add select by @srivarra +- Update README.md by @srivarra +- 💚 Set uv sync --frozen by @srivarra ## [0.0.2] - 2024-11-12 ### Changed -- 📝 Added pre-commit readme badge by @srivarra -- Merge pull request #14 from srivarra/ci/release_workflow by @srivarra in [#14](https://github.com/srivarra/annsel/pull/14) -- 🔧 Add **version** to **init** by @srivarra -- ➕ Add typing-extensions by @srivarra -- 📝 Added citation.cff by @srivarra -- 🙈 .python-version by @srivarra -- 🔧 Remove .python-version by @srivarra -- 💚 Ciremove version in **init**.py by @srivarra -- 💚 Fetch-depth: 0 by @srivarra -- 🔧 Update pyproject, add hatch-vcs dynamic version by @srivarra -- 💚 What's going on with ci by @srivarra -- 💚 Fix incorrect name for ci by @srivarra -- Merge pull request #12 from srivarra/docs/changelog-release-drafter by @srivarra in [#12](https://github.com/srivarra/annsel/pull/12) -- 👷 Remove font by @srivarra -- 👷 Use uv, remove pip by @srivarra -- 👷 Uv for rtd by @srivarra -- ⏪️ Remove changelog ci update by @srivarra -- 💚 Changelog 3 by @srivarra -- 💚 Changelog testing 2 by @srivarra -- 💚 Changelog testing by @srivarra -- 💚 Change commit changelog author to github_actions by @srivarra -- 💚 Yaml or yml by @srivarra -- 👷 Add release drafter by @srivarra -- Merge pull request #7 from srivarra/docs/restructure by @srivarra in [#7](https://github.com/srivarra/annsel/pull/7) -- ✅ Added sparsity X tests by @srivarra -- ♻️ Refactor \_extract_X by @srivarra -- 📝 Clean notebook by @srivarra -- ✅ Updated x tests by @srivarra -- Merge branch 'main' into docs/restructure by @srivarra -- Merge pull request #8 from srivarra/pre-commit-ci-update-config by @srivarra in [#8](https://github.com/srivarra/annsel/pull/8) -- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci[bot] -- ✅ Add pipe tests by @srivarra -- 📝 Added scanpy plot with pipe by @srivarra -- 🎨 Format pyproject.toml by @srivarra -- 📝 Updated landing page by @srivarra -- 📝 Updated documentation structure by @srivarra +- 📝 Added pre-commit readme badge by @srivarra +- Merge pull request #14 from srivarra/ci/release_workflow by @srivarra in [#14](https://github.com/srivarra/annsel/pull/14) +- 🔧 Add **version** to **init** by @srivarra +- ➕ Add typing-extensions by @srivarra +- 📝 Added citation.cff by @srivarra +- 🙈 .python-version by @srivarra +- 🔧 Remove .python-version by @srivarra +- 💚 Ciremove version in **init**.py by @srivarra +- 💚 Fetch-depth: 0 by @srivarra +- 🔧 Update pyproject, add hatch-vcs dynamic version by @srivarra +- 💚 What's going on with ci by @srivarra +- 💚 Fix incorrect name for ci by @srivarra +- Merge pull request #12 from srivarra/docs/changelog-release-drafter by @srivarra in [#12](https://github.com/srivarra/annsel/pull/12) +- 👷 Remove font by @srivarra +- 👷 Use uv, remove pip by @srivarra +- 👷 Uv for rtd by @srivarra +- ⏪️ Remove changelog ci update by @srivarra +- 💚 Changelog 3 by @srivarra +- 💚 Changelog testing 2 by @srivarra +- 💚 Changelog testing by @srivarra +- 💚 Change commit changelog author to github_actions by @srivarra +- 💚 Yaml or yml by @srivarra +- 👷 Add release drafter by @srivarra +- Merge pull request #7 from srivarra/docs/restructure by @srivarra in [#7](https://github.com/srivarra/annsel/pull/7) +- ✅ Added sparsity X tests by @srivarra +- ♻️ Refactor \_extract_X by @srivarra +- 📝 Clean notebook by @srivarra +- ✅ Updated x tests by @srivarra +- Merge branch 'main' into docs/restructure by @srivarra +- Merge pull request #8 from srivarra/pre-commit-ci-update-config by @srivarra in [#8](https://github.com/srivarra/annsel/pull/8) +- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci[bot] +- ✅ Add pipe tests by @srivarra +- 📝 Added scanpy plot with pipe by @srivarra +- 🎨 Format pyproject.toml by @srivarra +- 📝 Updated landing page by @srivarra +- 📝 Updated documentation structure by @srivarra ## New Contributors -- @pre-commit-ci[bot] made their first contribution +- @pre-commit-ci[bot] made their first contribution ## [0.0.1] - 2024-11-10 ### Changed -- Merge pull request #5 from srivarra/ci_release_fix by @srivarra in [#5](https://github.com/srivarra/annsel/pull/5) -- 💚 Release fixes by @srivarra -- Merge pull request #4 from srivarra/filter by @srivarra in [#4](https://github.com/srivarra/annsel/pull/4) -- 📝 Remove nbsphinx by @srivarra -- ➖ Remove pytest rich by @srivarra -- ✨ Filter mostly fixed by @srivarra -- 📝 Add a link to the discussions. by @srivarra -- ✅ Dataclasses from attrs again by @srivarra -- 🏷️ Fixed dataclasses by @srivarra -- ✨ Fixed up filtering by @srivarra -- Merge pull request #1 from srivarra/configuration by @srivarra in [#1](https://github.com/srivarra/annsel/pull/1) -- 📝 Do not fail on warning by @srivarra -- 💚 Removed upload test results to codecov by @srivarra -- 📝 Added matplotlib to docs by @srivarra -- 📝 Update rtd by @srivarra -- 📝 Fix rtd by @srivarra -- 🧑‍💻 Added gitcliff changelog by @srivarra -- 💚 Added python 3.12 to test suite by @srivarra -- ♻️ Renamed accessor by @srivarra -- ➖ Removed twine by @srivarra -- ➕ Added twine by @srivarra -- ➕ Added pytest extra deps by @srivarra -- 🎉 Begin by @srivarra +- Merge pull request #5 from srivarra/ci_release_fix by @srivarra in [#5](https://github.com/srivarra/annsel/pull/5) +- 💚 Release fixes by @srivarra +- Merge pull request #4 from srivarra/filter by @srivarra in [#4](https://github.com/srivarra/annsel/pull/4) +- 📝 Remove nbsphinx by @srivarra +- ➖ Remove pytest rich by @srivarra +- ✨ Filter mostly fixed by @srivarra +- 📝 Add a link to the discussions. by @srivarra +- ✅ Dataclasses from attrs again by @srivarra +- 🏷️ Fixed dataclasses by @srivarra +- ✨ Fixed up filtering by @srivarra +- Merge pull request #1 from srivarra/configuration by @srivarra in [#1](https://github.com/srivarra/annsel/pull/1) +- 📝 Do not fail on warning by @srivarra +- 💚 Removed upload test results to codecov by @srivarra +- 📝 Added matplotlib to docs by @srivarra +- 📝 Update rtd by @srivarra +- 📝 Fix rtd by @srivarra +- 🧑‍💻 Added gitcliff changelog by @srivarra +- 💚 Added python 3.12 to test suite by @srivarra +- ♻️ Renamed accessor by @srivarra +- ➖ Removed twine by @srivarra +- ➕ Added twine by @srivarra +- ➕ Added pytest extra deps by @srivarra +- 🎉 Begin by @srivarra ## New Contributors -- @srivarra made their first contribution in [#5](https://github.com/srivarra/annsel/pull/5) - [unreleased]: https://github.com/srivarra/annsel/compare/v0.0.4..HEAD - [0.0.4]: https://github.com/srivarra/annsel/compare/v0.0.3..v0.0.4 - [0.0.3]: https://github.com/srivarra/annsel/compare/v0.0.2..v0.0.3 - [0.0.2]: https://github.com/srivarra/annsel/compare/0.0.1..v0.0.2 +- @srivarra made their first contribution in [#5](https://github.com/srivarra/annsel/pull/5) + [unreleased]: https://github.com/srivarra/annsel/compare/v0.0.4..HEAD + [0.0.4]: https://github.com/srivarra/annsel/compare/v0.0.3..v0.0.4 + [0.0.3]: https://github.com/srivarra/annsel/compare/v0.0.2..v0.0.3 + [0.0.2]: https://github.com/srivarra/annsel/compare/0.0.1..v0.0.2