diff --git a/AAFTF/sourpurge.py b/AAFTF/sourpurge.py index 5633a8b..0452590 100644 --- a/AAFTF/sourpurge.py +++ b/AAFTF/sourpurge.py @@ -221,7 +221,7 @@ def run(parser,args): if '.' in baseinput: baseinput = baseinput.rsplit('.',1)[0] - os.rename(sourmashTSV, baseinput+'.sourmash-taxonomy.csv') + shutil.copy(sourmashTSV, baseinput+'.sourmash-taxonomy.csv') if not args.debug: SafeRemove(args.workdir)