diff --git a/revdep/.gitignore b/revdep/.gitignore deleted file mode 100644 index bc768ae..0000000 --- a/revdep/.gitignore +++ /dev/null @@ -1,7 +0,0 @@ -checks -library -checks.noindex -library.noindex -data.sqlite -*.html -cloud.noindex diff --git a/revdep/README.md b/revdep/README.md deleted file mode 100644 index ac19033..0000000 --- a/revdep/README.md +++ /dev/null @@ -1,136 +0,0 @@ -# Platform - -|field |value | -|:--------|:----------------------------| -|version |R version 4.1.0 (2021-05-18) | -|os |CentOS Linux 7 (Core) | -|system |x86_64, linux-gnu | -|ui |X11 | -|language |(EN) | -|collate |en_US.UTF-8 | -|ctype |en_US.UTF-8 | -|tz |Australia/Sydney | -|date |2021-06-13 | - -# Dependencies - -|package |old |new |Δ | -|:-------|:------|:------|:--| -|network |1.17.0 |1.17.1 |* | - -# Revdeps - -## New problems (1) - -|package |version |error |warning |note | -|:------------------------|:-------|:------|:-------|:----| -|[ICON](problems.md#icon) |0.4.0 |__+1__ | | | - -## All (103) - -|package |version |error |warning |note | -|:----------------------------------------------------|:--------|:------|:-------|:----| -|amen |1.4.4 | | | | -|backbone |1.5.0 | | | | -|[BasketballAnalyzeR](problems.md#basketballanalyzer) |0.5.0 | | |1 | -|Bergm |5.0.2 | | | | -|[BGGM](problems.md#bggm) |2.0.3 | | |1 | -|[bingat](problems.md#bingat) |1.3 | | |1 | -|[Blaunet](problems.md#blaunet) |2.1.0 |1 | |2 | -|[bootcluster](problems.md#bootcluster) |0.2.5 | | |1 | -|[broom](problems.md#broom) |0.7.7 | | |2 | -|btergm |1.9.13 | | | | -|[CEMiTool](problems.md#cemitool) |1.16.0 | | |2 | -|[CeTF](problems.md#cetf) |1.4.0 |1 | |1 | -|[chorrrds](problems.md#chorrrds) |0.1.9.5 | | |2 | -|[CINNA](problems.md#cinna) |1.1.54 | | |1 | -|[CluMSID](problems.md#clumsid) |1.8.0 | | |1 | -|collpcm |1.1 | | | | -|degreenet |1.3-3 | | | | -|[discourseGT](problems.md#discoursegt) |1.1.5 |1 | |1 | -|dnr |0.3.5 | | | | -|[EGAnet](problems.md#eganet) |0.9.8 | | |1 | -|egor |1.21.6 | | | | -|EloRating |0.46.11 | | |-1 | -|EpiModel |2.0.5 | | | | -|epinet |2.1.8 | | | | -|[ergm](problems.md#ergm) |3.11.0 | | |1 | -|ergm.count |3.4.0 | | | | -|ergm.ego |0.6.1 | | | | -|ergm.rank |1.2.0 | | | | -|ergm.userterms |3.10.0 | | | | -|[ergMargins](problems.md#ergmargins) |0.1.2 | | |3 | -|[ergmito](problems.md#ergmito) |0.3-0 | | |1 | -|[fcoex](problems.md#fcoex) |1.6.0 |1 |2 |2 | -|fergm |1.1.4 | | | | -|fglsnet |1.0 | | | | -|[fssemR](problems.md#fssemr) |0.1.6 | | |2 | -|[genBaRcode](problems.md#genbarcode) |1.2.4 | | |1 | -|[geomnet](problems.md#geomnet) |0.3.1 |1 | |1 | -|[GGally](problems.md#ggally) |2.1.1 |1 | | | -|[GGMnonreg](problems.md#ggmnonreg) |1.0.0 | | |1 | -|GGMselect |0.1-12.4 | | | | -|[ggnetwork](problems.md#ggnetwork) |0.5.9 |1 | |1 | -|[GGPA](problems.md#ggpa) |1.4.0 | | |3 | -|[ggraph](problems.md#ggraph) |2.0.5 | | |1 | -|[GOxploreR](problems.md#goxplorer) |1.2.1 | | |1 | -|[GRENITS](problems.md#grenits) |1.44.0 | | |3 | -|[gwdegree](problems.md#gwdegree) |0.1.1 | | |2 | -|haplotypes |1.1.2 | | | | -|hergm |4.1-7 | | | | -|[ICON](problems.md#icon) |0.4.0 |__+1__ | | | -|intergraph |2.0-2 | | | | -|ITNr |0.6.0 | | | | -|jlsm |0.1.0 | | | | -|latentnet |2.10.5 | | | | -|[leiden](problems.md#leiden) |0.3.8 |1 | | | -|[lolog](problems.md#lolog) |1.2 |-1 | |1 | -|lvm4net |0.3 | | | | -|[MBCbook](problems.md#mbcbook) |0.1.1 | | |2 | -|[migraph](problems.md#migraph) |0.6.6 | | |1 | -|mlergm |0.7 | | | | -|motifr |1.0.0 | | | | -|[mpa](problems.md#mpa) |0.7.3 | | |3 | -|MRPC |2.3.1 | | | | -|ndtv |0.13.0 | | | | -|[netdiffuseR](problems.md#netdiffuser) |1.22.3 | | |1 | -|[nethet](problems.md#nethet) |1.24.0 | |1 |1 | -|[NetMix](problems.md#netmix) |0.2.0 | | |1 | -|networkABC |0.8-0 | | | | -|[NetworkChange](problems.md#networkchange) |0.7 | | |2 | -|NetworkDistance |0.3.3 | | | | -|[networkDynamic](problems.md#networkdynamic) |0.10.1 | |1 |1 | -|networkDynamicData |0.2.1 | | | | -|NetworkExtinction |0.1.1 | | | | -|[networksis](problems.md#networksis) |2.1-3 | | |1 | -|[PAFit](problems.md#pafit) |1.1.0.2 | |1 | | -|[PDN](problems.md#pdn) |0.1.0 | | |1 | -|[PhosR](problems.md#phosr) |1.2.0 | | |3 | -|[pkggraph](problems.md#pkggraph) |0.2.3 | | |1 | -|[predictionet](problems.md#predictionet) |1.38.0 | | |4 | -|[PubScore](problems.md#pubscore) |1.4.0 | | |2 | -|pulsar |0.3.7 | | | | -|[quanteda.textplots](problems.md#quantedatextplots) |0.94 | | |1 | -|QuantNorm |1.0.5 | | | | -|RDS |0.9-3 | | | | -|RHMS |1.6 | | | | -|[RSiena](problems.md#rsiena) |1.3.0 | | |1 | -|[sand](problems.md#sand) |2.0.0 | | |1 | -|[SBICgraph](problems.md#sbicgraph) |1.0.0 | | |2 | -|sidier |4.0.3 | | | | -|sna |2.6 | | | | -|[sparsebnUtils](problems.md#sparsebnutils) |0.0.8 | | |1 | -|SparseTSCGM |4.0 | | | | -|sspse |0.6 | | | | -|statnet |2019.6 | | | | -|[statnetWeb](problems.md#statnetweb) |0.5.6 | | |1 | -|tergm |3.7.0 | | | | -|[tergmLite](problems.md#tergmlite) |2.2.1 | | |1 | -|[tidygraph](problems.md#tidygraph) |1.2.0 | | |1 | -|tsna |0.3.3 | | | | -|VBLPCM |2.4.7 | | | | -|VineCopula |2.4.2 | | | | -|[vivid](problems.md#vivid) |0.1.0 |1 | |2 | -|WRSS |3.0 | | | | -|[xergm.common](problems.md#xergmcommon) |1.7.8 | | |1 | - diff --git a/revdep/cran.md b/revdep/cran.md deleted file mode 100644 index 7ff67a1..0000000 --- a/revdep/cran.md +++ /dev/null @@ -1,15 +0,0 @@ -## revdepcheck results - -We checked 103 reverse dependencies (93 from CRAN + 10 from Bioconductor), comparing R CMD check results across CRAN and dev versions of this package. - - * We saw 1 new problems - * We failed to check 0 packages - -Issues with CRAN packages are summarised below. - -### New problems -(This reports the first line of each new failure) - -* ICON - checking tests ... - diff --git a/revdep/email.yml b/revdep/email.yml deleted file mode 100644 index 0c5cef8..0000000 --- a/revdep/email.yml +++ /dev/null @@ -1,5 +0,0 @@ -release_date: ??? -rel_release_date: ??? -my_news_url: ??? -release_version: ??? -release_details: ??? diff --git a/revdep/failures.md b/revdep/failures.md deleted file mode 100644 index 9a20736..0000000 --- a/revdep/failures.md +++ /dev/null @@ -1 +0,0 @@ -*Wow, no problems at all. :)* \ No newline at end of file diff --git a/revdep/problems.md b/revdep/problems.md deleted file mode 100644 index 67dc35e..0000000 --- a/revdep/problems.md +++ /dev/null @@ -1,1831 +0,0 @@ -# BasketballAnalyzeR - -
- -* Version: 0.5.0 -* GitHub: https://github.com/sndmrc/BasketballAnalyzeR -* Source code: https://github.com/cran/BasketballAnalyzeR -* Date/Publication: 2020-06-26 09:00:11 UTC -* Number of recursive dependencies: 74 - -Run `revdep_details(, "BasketballAnalyzeR")` for more info - -
- -## In both - -* checking dependencies in R code ... NOTE - ``` - Namespaces in Imports field not imported from: - ‘circlize’ ‘hexbin’ ‘scales’ ‘sna’ - All declared Imports should be used. - ``` - -# BGGM - -
- -* Version: 2.0.3 -* GitHub: https://github.com/donaldRwilliams/BGGM -* Source code: https://github.com/cran/BGGM -* Date/Publication: 2020-12-03 08:20:06 UTC -* Number of recursive dependencies: 165 - -Run `revdep_details(, "BGGM")` for more info - -
- -## In both - -* checking installed package size ... NOTE - ``` - installed size is 13.5Mb - sub-directories of 1Mb or more: - doc 3.3Mb - help 1.2Mb - libs 8.0Mb - ``` - -# bingat - -
- -* Version: 1.3 -* GitHub: NA -* Source code: https://github.com/cran/bingat -* Date/Publication: 2017-07-05 18:30:37 UTC -* Number of recursive dependencies: 34 - -Run `revdep_details(, "bingat")` for more info - -
- -## In both - -* checking Rd cross-references ... NOTE - ``` - Package unavailable to check Rd xrefs: ‘genalg’ - ``` - -# Blaunet - -
- -* Version: 2.1.0 -* GitHub: NA -* Source code: https://github.com/cran/Blaunet -* Date/Publication: 2020-05-22 08:10:11 UTC -* Number of recursive dependencies: 85 - -Run `revdep_details(, "Blaunet")` for more info - -
- -## In both - -* checking examples ... ERROR - ``` - Running examples in ‘Blaunet-Ex.R’ failed - The error most likely occurred in: - - > ### Name: blau - > ### Title: Converts raw data into an object for Blau status analysis - > ### Aliases: blau - > - > ### ** Examples - > - > ##simple example - ... - > ##example with relational data - > data(BSANet) - > square.data <- BSANet$square.data - > el <- BSANet$el - > - > b <- blau(square.data, node.ids = 'person', ecology.ids = 'city', graph = el) - Error in Ops.factor(sources, targets) : - level sets of factors are different - Calls: blau ... as.network.data.frame -> .validate_edge_df -> which -> Ops.factor - Execution halted - ``` - -* checking package dependencies ... NOTE - ``` - Packages suggested but not available for checking: - 'gWidgets', 'gWidgetsRGtk2' - ``` - -* checking dependencies in R code ... NOTE - ``` - Namespaces in Imports field not imported from: - ‘RGtk2’ ‘cairoDevice’ ‘ergm’ ‘foreign’ ‘haven’ ‘plot3D’ ‘plot3Drgl’ - ‘rgl’ ‘sna’ ‘statnet.common’ - All declared Imports should be used. - ``` - -# bootcluster - -
- -* Version: 0.2.5 -* GitHub: NA -* Source code: https://github.com/cran/bootcluster -* Date/Publication: 2021-06-10 08:20:04 UTC -* Number of recursive dependencies: 69 - -Run `revdep_details(, "bootcluster")` for more info - -
- -## In both - -* checking dependencies in R code ... NOTE - ``` - Namespace in Imports field not imported from: ‘sna’ - All declared Imports should be used. - ``` - -# broom - -
- -* Version: 0.7.7 -* GitHub: https://github.com/tidymodels/broom -* Source code: https://github.com/cran/broom -* Date/Publication: 2021-06-13 04:40:17 UTC -* Number of recursive dependencies: 295 - -Run `revdep_details(, "broom")` for more info - -
- -## In both - -* checking package dependencies ... NOTE - ``` - Packages suggested but not available for checking: - 'rgeos', 'spdep', 'spatialreg' - ``` - -* checking Rd cross-references ... NOTE - ``` - Package unavailable to check Rd xrefs: ‘spatialreg’ - ``` - -# CEMiTool - -
- -* Version: 1.16.0 -* GitHub: NA -* Source code: https://github.com/cran/CEMiTool -* Date/Publication: 2021-05-19 -* Number of recursive dependencies: 183 - -Run `revdep_details(, "CEMiTool")` for more info - -
- -## In both - -* checking installed package size ... NOTE - ``` - installed size is 14.5Mb - sub-directories of 1Mb or more: - data 4.8Mb - doc 4.0Mb - extdata 4.5Mb - ``` - -* checking R code for possible problems ... NOTE - ``` - flip_vector: no visible global function definition for ‘setNames’ - select_genes: no visible global function definition for ‘var’ - get_hubs,CEMiTool : : no visible global function definition - for ‘head’ - get_merged_mods,CEMiTool: no visible global function definition for - ‘as.dist’ - get_mods,CEMiTool: no visible global function definition for ‘as.dist’ - get_phi,CEMiTool: no visible global function definition for ‘tail’ - get_phi,CEMiTool: no visible global function definition for ‘head’ - mod_gene_num,CEMiTool: no visible binding for global variable ‘modules’ - ... - save_plots,CEMiTool: no visible global function definition for - ‘dev.off’ - Undefined global functions or variables: - ..eq.label.. ..rr.label.. := Mean Variance as.dist data dev.off dist - head modules num_genes setNames tail var - Consider adding - importFrom("grDevices", "dev.off") - importFrom("stats", "as.dist", "dist", "setNames", "var") - importFrom("utils", "data", "head", "tail") - to your NAMESPACE file. - ``` - -# CeTF - -
- -* Version: 1.4.0 -* GitHub: NA -* Source code: https://github.com/cran/CeTF -* Date/Publication: 2021-05-19 -* Number of recursive dependencies: 244 - -Run `revdep_details(, "CeTF")` for more info - -
- -## In both - -* checking examples ... ERROR - ``` - Running examples in ‘CeTF-Ex.R’ failed - The error most likely occurred in: - - > ### Name: netConditionsPlot - > ### Title: Network plot of gene-gene/gene-TFs interactions - > ### Aliases: netConditionsPlot - > - > ### ** Examples - > - > # loading a simulated counts data - ... - Trios for gene 20 - Trios for gene 30 - Trios for gene 40 - > - > # plotting networks conditions - > netConditionsPlot(out) - Error in set.vertex.attribute.network(out, attrname = "vertex.names", : - Inappropriate value given in set.vertex.attribute. - Calls: netConditionsPlot ... set.vertex.attribute -> set.vertex.attribute.network - Execution halted - ``` - -* checking installed package size ... NOTE - ``` - installed size is 6.4Mb - sub-directories of 1Mb or more: - data 1.7Mb - doc 4.0Mb - ``` - -# chorrrds - -
- -* Version: 0.1.9.5 -* GitHub: https://github.com/r-music/chorrrds -* Source code: https://github.com/cran/chorrrds -* Date/Publication: 2020-06-30 17:30:02 UTC -* Number of recursive dependencies: 73 - -Run `revdep_details(, "chorrrds")` for more info - -
- -## In both - -* checking dependencies in R code ... NOTE - ``` - Namespace in Imports field not imported from: ‘forcats’ - All declared Imports should be used. - ``` - -* checking data for non-ASCII characters ... NOTE - ``` - Note: found 4004 marked UTF-8 strings - ``` - -# CINNA - -
- -* Version: 1.1.54 -* GitHub: NA -* Source code: https://github.com/cran/CINNA -* Date/Publication: 2021-01-28 15:00:02 UTC -* Number of recursive dependencies: 135 - -Run `revdep_details(, "CINNA")` for more info - -
- -## In both - -* checking dependencies in R code ... NOTE - ``` - Namespace in Imports field not imported from: ‘circlize’ - All declared Imports should be used. - ``` - -# CluMSID - -
- -* Version: 1.8.0 -* GitHub: https://github.com/tdepke/CluMSID -* Source code: https://github.com/cran/CluMSID -* Date/Publication: 2021-05-19 -* Number of recursive dependencies: 168 - -Run `revdep_details(, "CluMSID")` for more info - -
- -## In both - -* checking installed package size ... NOTE - ``` - installed size is 6.2Mb - sub-directories of 1Mb or more: - doc 5.6Mb - ``` - -# discourseGT - -
- -* Version: 1.1.5 -* GitHub: NA -* Source code: https://github.com/cran/discourseGT -* Date/Publication: 2021-04-02 19:00:02 UTC -* Number of recursive dependencies: 103 - -Run `revdep_details(, "discourseGT")` for more info - -
- -## In both - -* checking examples ... ERROR - ``` - Running examples in ‘discourseGT-Ex.R’ failed - The error most likely occurred in: - - > ### Name: plot1Att - > ### Title: Plots Graphs using ggplot2 with one attribute - > ### Aliases: plot1Att - > - > ### ** Examples - > - > df <- sampleData1 - ... - > plot1Att(baseNet, prop = 20, graphmode = "fruchtermanreingold", - + attribute = attdata$gender, - + attribute.label = "Gender", - + attribute.node.labels = attdata$node, attribute.nodesize = 12) - Error: `loops` is `FALSE`, but `x` contains loops. - The following values are affected: - - `x[1, 1:2]` - - `x[10, 1:2]` - - `x[15, 1:2]` - Execution halted - ``` - -* checking dependencies in R code ... NOTE - ``` - Namespaces in Imports field not imported from: - ‘BiocManager’ ‘ggpubr’ ‘sna’ - All declared Imports should be used. - ``` - -# EGAnet - -
- -* Version: 0.9.8 -* GitHub: NA -* Source code: https://github.com/cran/EGAnet -* Date/Publication: 2021-02-16 18:10:06 UTC -* Number of recursive dependencies: 206 - -Run `revdep_details(, "EGAnet")` for more info - -
- -## In both - -* checking installed package size ... NOTE - ``` - installed size is 5.6Mb - sub-directories of 1Mb or more: - data 4.0Mb - ``` - -# ergm - -
- -* Version: 3.11.0 -* GitHub: https://github.com/statnet/ergm -* Source code: https://github.com/cran/ergm -* Date/Publication: 2020-10-14 09:30:02 UTC -* Number of recursive dependencies: 69 - -Run `revdep_details(, "ergm")` for more info - -
- -## In both - -* checking installed package size ... NOTE - ``` - installed size is 10.5Mb - sub-directories of 1Mb or more: - doc 3.6Mb - help 1.5Mb - libs 3.9Mb - ``` - -# ergMargins - -
- -* Version: 0.1.2 -* GitHub: NA -* Source code: https://github.com/cran/ergMargins -* Date/Publication: 2021-02-23 14:50:05 UTC -* Number of recursive dependencies: 75 - -Run `revdep_details(, "ergMargins")` for more info - -
- -## In both - -* checking dependencies in R code ... NOTE - ``` - Namespaces in Imports field not imported from: - ‘btergm’ ‘methods’ ‘sna’ ‘statnet’ - All declared Imports should be used. - ``` - -* checking Rd cross-references ... NOTE - ``` - Package unavailable to check Rd xrefs: ‘margins’ - ``` - -* checking LazyData ... NOTE - ``` - 'LazyData' is specified without a 'data' directory - ``` - -# ergmito - -
- -* Version: 0.3-0 -* GitHub: https://github.com/muriteams/ergmito -* Source code: https://github.com/cran/ergmito -* Date/Publication: 2020-08-10 21:40:02 UTC -* Number of recursive dependencies: 59 - -Run `revdep_details(, "ergmito")` for more info - -
- -## In both - -* checking installed package size ... NOTE - ``` - installed size is 9.7Mb - sub-directories of 1Mb or more: - R 1.1Mb - libs 7.9Mb - ``` - -# fcoex - -
- -* Version: 1.6.0 -* GitHub: NA -* Source code: https://github.com/cran/fcoex -* Date/Publication: 2021-05-19 -* Number of recursive dependencies: 280 - -Run `revdep_details(, "fcoex")` for more info - -
- -## In both - -* checking examples ... ERROR - ``` - Running examples in ‘fcoex-Ex.R’ failed - The error most likely occurred in: - - > ### Name: mod_ora - > ### Title: Over Representation Analysis (ORA) - > ### Aliases: mod_ora mod_ora,fcoex-method - > - > ### ** Examples - > - > data("fc") - ... - > gmt_fname <- system.file("extdata", "pathways.gmt", package = "CEMiTool") - > gmt_in <- pathwayPCA::read_gmt(gmt_fname) - Warning in file(con, "rb") : - file("") only supports open = "w+" and open = "w+b": using the former - Warning in readChar(file, nchars = nChars, useBytes = TRUE) : - text connection used with readChar(), results may be incorrect - Error in readChar(file, nchars = nChars, useBytes = TRUE) : - invalid 'nchars' argument - Calls: -> readChar - Execution halted - ``` - -* checking whether package ‘fcoex’ can be installed ... WARNING - ``` - Found the following significant warnings: - Warning: replacing previous import ‘Matrix::head’ by ‘utils::head’ when loading ‘fcoex’ - See ‘/srv/scratch/z3528859/github/statnet/network/revdep/checks/fcoex/new/fcoex.Rcheck/00install.out’ for details. - ``` - -* checking Rd \usage sections ... WARNING - ``` - Documented arguments not in \usage in documentation object '.plot_one_interaction': - ‘...’ - - Functions with \usage entries need to have the appropriate \alias - entries, and all their arguments documented. - The \usage entries must correspond to syntactically valid R code. - See chapter ‘Writing R documentation files’ in the ‘Writing R - Extensions’ manual. - ``` - -* checking package dependencies ... NOTE - ``` - Package suggested but not available for checking: ‘schex’ - ``` - -* checking installed package size ... NOTE - ``` - installed size is 8.0Mb - sub-directories of 1Mb or more: - data 3.7Mb - doc 3.8Mb - ``` - -# fssemR - -
- -* Version: 0.1.6 -* GitHub: https://github.com/Ivis4ml/fssemR -* Source code: https://github.com/cran/fssemR -* Date/Publication: 2019-12-04 16:10:05 UTC -* Number of recursive dependencies: 80 - -Run `revdep_details(, "fssemR")` for more info - -
- -## In both - -* checking installed package size ... NOTE - ``` - installed size is 16.8Mb - sub-directories of 1Mb or more: - libs 15.9Mb - ``` - -* checking LazyData ... NOTE - ``` - 'LazyData' is specified without a 'data' directory - ``` - -# genBaRcode - -
- -* Version: 1.2.4 -* GitHub: NA -* Source code: https://github.com/cran/genBaRcode -* Date/Publication: 2020-12-02 22:50:07 UTC -* Number of recursive dependencies: 152 - -Run `revdep_details(, "genBaRcode")` for more info - -
- -## In both - -* checking installed package size ... NOTE - ``` - installed size is 5.8Mb - sub-directories of 1Mb or more: - doc 1.1Mb - extdata 3.9Mb - ``` - -# geomnet - -
- -* Version: 0.3.1 -* GitHub: https://github.com/sctyner/geomnet -* Source code: https://github.com/cran/geomnet -* Date/Publication: 2020-11-26 11:00:06 UTC -* Number of recursive dependencies: 86 - -Run `revdep_details(, "geomnet")` for more info - -
- -## In both - -* checking examples ... ERROR - ``` - Running examples in ‘geomnet-Ex.R’ failed - The error most likely occurred in: - - > ### Name: football - > ### Title: College football games network (undirected) - > ### Aliases: football - > ### Keywords: datasets - > - > ### ** Examples - > - ... - + scale_colour_brewer("Conference", palette = "Paired") - Error: `loops` is `FALSE`, but `x` contains loops. - The following values are affected: - - `x[604, 1:2]` - - `x[605, 1:2]` - - `x[610, 1:2]` - - `x[615, 1:2]` - - `x[617, 1:2]` - - `x[618, 1:2]` - Execution halted - ``` - -* checking installed package size ... NOTE - ``` - installed size is 5.2Mb - sub-directories of 1Mb or more: - data 2.6Mb - doc 1.4Mb - ``` - -# GGally - -
- -* Version: 2.1.1 -* GitHub: https://github.com/ggobi/ggally -* Source code: https://github.com/cran/GGally -* Date/Publication: 2021-03-08 06:00:03 UTC -* Number of recursive dependencies: 135 - -Run `revdep_details(, "GGally")` for more info - -
- -## In both - -* checking tests ... - ``` - ERROR - Running the tests in ‘tests/testthat.R’ failed. - Last 13 lines of output: - 4. └─network:::.validate_edge_df(...) - ── Error (test-ggnetworkmap.R:34:1): (code run outside of `test_that()`) ─────── - Error: `loops` is `FALSE`, but `x` contains loops. - The following values are affected: - - `x[114, 1:2]` - Backtrace: - █ - 1. └─network::network(flights, directed = TRUE) test-ggnetworkmap.R:34:0 - 2. ├─network::as.network(...) - 3. └─network::as.network.data.frame(...) - 4. └─network:::.validate_edge_df(...) - - [ FAIL 3 | WARN 1329 | SKIP 3 | PASS 563 ] - Error: Test failures - Execution halted - ``` - -# GGMnonreg - -
- -* Version: 1.0.0 -* GitHub: NA -* Source code: https://github.com/cran/GGMnonreg -* Date/Publication: 2021-04-08 11:30:06 UTC -* Number of recursive dependencies: 111 - -Run `revdep_details(, "GGMnonreg")` for more info - -
- -## In both - -* checking dependencies in R code ... NOTE - ``` - Namespaces in Imports field not imported from: - ‘Matrix’ ‘Rdpack’ - All declared Imports should be used. - ``` - -# ggnetwork - -
- -* Version: 0.5.9 -* GitHub: https://github.com/briatte/ggnetwork -* Source code: https://github.com/cran/ggnetwork -* Date/Publication: 2021-06-04 17:50:02 UTC -* Number of recursive dependencies: 65 - -Run `revdep_details(, "ggnetwork")` for more info - -
- -## In both - -* checking tests ... - ``` - ERROR - Running the tests in ‘tests/testthat.R’ failed. - Complete output: - > library(testthat) - > library(ggnetwork) - Loading required package: ggplot2 - > - > test_check("ggnetwork") - ══ Failed tests ════════════════════════════════════════════════════════════════ - ── Failure (test-ggnetwork.R:57:3): ggnetwork works ──────────────────────────── - `ggnetwork(n)` did not produce any warnings. - - [ FAIL 1 | WARN 0 | SKIP 0 | PASS 42 ] - Error: Test failures - Execution halted - ``` - -* checking dependencies in R code ... NOTE - ``` - Namespaces in Imports field not imported from: - ‘sna’ ‘utils’ - All declared Imports should be used. - ``` - -# GGPA - -
- -* Version: 1.4.0 -* GitHub: https://github.com/dongjunchung/GGPA -* Source code: https://github.com/cran/GGPA -* Date/Publication: 2021-05-19 -* Number of recursive dependencies: 68 - -Run `revdep_details(, "GGPA")` for more info - -
- -## In both - -* checking installed package size ... NOTE - ``` - installed size is 8.8Mb - sub-directories of 1Mb or more: - doc 3.6Mb - libs 3.9Mb - ``` - -* checking dependencies in R code ... NOTE - ``` - Packages in Depends field not imported from: - ‘network’ ‘scales’ ‘sna’ - These packages need to be imported from (in the NAMESPACE file) - for when this namespace is loaded but not attached. - ``` - -* checking compiled code ... NOTE - ``` - File ‘GGPA/libs/GGPA.so’: - Found ‘_ZSt4cout’, possibly from ‘std::cout’ (C++) - Object: ‘3_Param.o’ - - Compiled code should not call entry points which might terminate R nor - write to stdout/stderr instead of to the console, nor use Fortran I/O - nor system RNGs. - - See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual. - ``` - -# ggraph - -
- -* Version: 2.0.5 -* GitHub: https://github.com/thomasp85/ggraph -* Source code: https://github.com/cran/ggraph -* Date/Publication: 2021-02-23 12:20:30 UTC -* Number of recursive dependencies: 95 - -Run `revdep_details(, "ggraph")` for more info - -
- -## In both - -* checking installed package size ... NOTE - ``` - installed size is 17.1Mb - sub-directories of 1Mb or more: - doc 7.5Mb - libs 7.9Mb - ``` - -# GOxploreR - -
- -* Version: 1.2.1 -* GitHub: NA -* Source code: https://github.com/cran/GOxploreR -* Date/Publication: 2021-06-07 14:50:02 UTC -* Number of recursive dependencies: 99 - -Run `revdep_details(, "GOxploreR")` for more info - -
- -## In both - -* checking installed package size ... NOTE - ``` - installed size is 9.2Mb - sub-directories of 1Mb or more: - R 8.5Mb - ``` - -# GRENITS - -
- -* Version: 1.44.0 -* GitHub: NA -* Source code: https://github.com/cran/GRENITS -* Date/Publication: 2021-05-19 -* Number of recursive dependencies: 40 - -Run `revdep_details(, "GRENITS")` for more info - -
- -## In both - -* checking installed package size ... NOTE - ``` - installed size is 16.5Mb - sub-directories of 1Mb or more: - libs 16.0Mb - ``` - -* checking dependencies in R code ... NOTE - ``` - Packages in Depends field not imported from: - ‘Rcpp’ ‘RcppArmadillo’ ‘ggplot2’ - These packages need to be imported from (in the NAMESPACE file) - for when this namespace is loaded but not attached. - ``` - -* checking R code for possible problems ... NOTE - ``` - .heatMap.ggplot: no visible global function definition for ‘ggplot’ - .heatMap.ggplot: no visible global function definition for ‘aes’ - .heatMap.ggplot: no visible binding for global variable ‘Var2’ - .heatMap.ggplot: no visible binding for global variable ‘Var1’ - .heatMap.ggplot: no visible global function definition for ‘geom_tile’ - .heatMap.ggplot: no visible binding for global variable ‘value’ - .heatMap.ggplot: no visible global function definition for - ‘scale_fill_gradient’ - .heatMap.ggplot: no visible global function definition for ‘theme’ - .heatMap.ggplot: no visible global function definition for - ... - .plotDistribParents.LargeMat: no visible global function definition for - ‘scale_x_discrete’ - .plotDistribParents.LargeMat: no visible global function definition for - ‘scale_y_discrete’ - .plotDistribParents.LargeMat: no visible global function definition for - ‘facet_wrap’ - Undefined global functions or variables: - GeneNames Var1 Var2 aes element_blank element_text facet_wrap - geom_tile ggplot ggtitle labs scale_fill_gradient scale_x_discrete - scale_y_discrete theme value variable - ``` - -# gwdegree - -
- -* Version: 0.1.1 -* GitHub: https://github.com/michaellevy/gwdegree -* Source code: https://github.com/cran/gwdegree -* Date/Publication: 2016-07-09 10:46:45 -* Number of recursive dependencies: 82 - -Run `revdep_details(, "gwdegree")` for more info - -
- -## In both - -* checking R code for possible problems ... NOTE - ``` - simCCCent : : no visible global function definition for - ‘simulate.formula’ - Undefined global functions or variables: - simulate.formula - ``` - -* checking LazyData ... NOTE - ``` - 'LazyData' is specified without a 'data' directory - ``` - -# ICON - -
- -* Version: 0.4.0 -* GitHub: https://github.com/rrrlw/ICON -* Source code: https://github.com/cran/ICON -* Date/Publication: 2020-10-23 23:00:02 UTC -* Number of recursive dependencies: 74 - -Run `revdep_details(, "ICON")` for more info - -
- -## Newly broken - -* checking tests ... - ``` - ERROR - Running the tests in ‘tests/testthat.R’ failed. - Last 13 lines of output: - ══ Skipped tests ═══════════════════════════════════════════════════════════════ - • On CRAN (1) - - ══ Failed tests ════════════════════════════════════════════════════════════════ - ── Failure (test-s3-network.R:21:3): as.network.ICON generic works ───────────── - network::get.edge.attribute(converted_network, "attrib") not equal to test_obj$attrib. - Lengths differ: 24 is not 25 - ── Failure (test-s3-network.R:24:3): as.network.ICON generic works ───────────── - network::network.edgecount(converted_network) not equal to `NROW`. - 1/1 mismatches - [1] 24 - 25 == -1 - - [ FAIL 2 | WARN 0 | SKIP 1 | PASS 11 ] - Error: Test failures - Execution halted - ``` - -# leiden - -
- -* Version: 0.3.8 -* GitHub: https://github.com/TomKellyGenetics/leiden -* Source code: https://github.com/cran/leiden -* Date/Publication: 2021-05-24 04:30:03 UTC -* Number of recursive dependencies: 124 - -Run `revdep_details(, "leiden")` for more info - -
- -## In both - -* checking tests ... - ``` - ERROR - Running the tests in ‘tests/testthat.R’ failed. - Last 13 lines of output: - 3. └─reticulate::import("numpy", delay_load = TRUE) - 4. └─reticulate:::py_module_import(module, convert = convert) - ── Error (test_multiplex.R:251:3): run with ModularityVertexPartition multiplexed and max_comm_size ── - Error: Node size vector not the same size as the number of nodes. - Backtrace: - █ - 1. ├─leiden::leiden(...) test_multiplex.R:251:2 - 2. └─leiden:::leiden.list(...) - 3. └─leiden:::find_partition_multiplex(...) - 4. └─leidenalg$find_partition_multiplex(...) - 5. └─reticulate:::py_call_impl(callable, dots$args, dots$keywords) - - [ FAIL 7 | WARN 0 | SKIP 8 | PASS 31 ] - Error: Test failures - Execution halted - ``` - -# lolog - -
- -* Version: 1.2 -* GitHub: https://github.com/statnet/lolog -* Source code: https://github.com/cran/lolog -* Date/Publication: 2019-01-12 22:52:41 UTC -* Number of recursive dependencies: 75 - -Run `revdep_details(, "lolog")` for more info - -
- -## Newly fixed - -* checking examples ... ERROR - ``` - Running examples in ‘lolog-Ex.R’ failed - The error most likely occurred in: - - > ### Name: as.network.Rcpp_DirectedNet - > ### Title: Convert a DirectedNet to a network object - > ### Aliases: as.network.Rcpp_DirectedNet - > - > ### ** Examples - > - > el <- matrix(c(1,2),ncol=2) - > - > #make an UndirectedNet with one edge and 5 nodes - > net <- new(UndirectedNet, el, 5L) - > - > nw <- as.network(net) - Error in apply(x[, 1:2], 1, sort) : dim(X) must have a positive length - Calls: as.network ... as.network.matrix -> network.edgelist -> t -> apply - Execution halted - ``` - -## In both - -* checking installed package size ... NOTE - ``` - installed size is 34.0Mb - sub-directories of 1Mb or more: - libs 32.0Mb - ``` - -# MBCbook - -
- -* Version: 0.1.1 -* GitHub: NA -* Source code: https://github.com/cran/MBCbook -* Date/Publication: 2019-07-02 07:00:03 UTC -* Number of recursive dependencies: 25 - -Run `revdep_details(, "MBCbook")` for more info - -
- -## In both - -* checking installed package size ... NOTE - ``` - installed size is 5.3Mb - sub-directories of 1Mb or more: - data 5.1Mb - ``` - -* checking data for non-ASCII characters ... NOTE - ``` - Note: found 66 marked UTF-8 strings - ``` - -# migraph - -
- -* Version: 0.6.6 -* GitHub: https://github.com/snlab-ch/migraph -* Source code: https://github.com/cran/migraph -* Date/Publication: 2021-05-13 23:20:10 UTC -* Number of recursive dependencies: 83 - -Run `revdep_details(, "migraph")` for more info - -
- -## In both - -* checking installed package size ... NOTE - ``` - installed size is 5.8Mb - ``` - -# mpa - -
- -* Version: 0.7.3 -* GitHub: NA -* Source code: https://github.com/cran/mpa -* Date/Publication: 2012-10-29 08:59:13 -* Number of recursive dependencies: 17 - -Run `revdep_details(, "mpa")` for more info - -
- -## In both - -* checking DESCRIPTION meta-information ... NOTE - ``` - Malformed Description field: should contain one or more complete sentences. - ``` - -* checking R code for possible problems ... NOTE - ``` - NB: .First.lib is obsolete and will not be used in R >= 3.0.0 - File ‘mpa/R/zzz.R’: - .First.lib calls: - cat("\n mpa: CoWords Method") - cat("\n ") - cat("\n Universidad Nacional de Colombia") - cat("\n ") - cat("\n Elaborado por: Daniel Rodriguez ") - cat("\n Campo Elias Pardo ") - cat("\n For help: ?mpa \n\n") - ... - generate messages. - See section ‘Good practice’ in '?.onAttach'. - - diagram.mpa: no visible global function definition for ‘abline’ - diagram.mpa: no visible global function definition for ‘text’ - Undefined global functions or variables: - abline text - Consider adding - importFrom("graphics", "abline", "text") - to your NAMESPACE file. - ``` - -* checking data for non-ASCII characters ... NOTE - ``` - Note: found 6 marked UTF-8 strings - ``` - -# netdiffuseR - -
- -* Version: 1.22.3 -* GitHub: https://github.com/USCCANA/netdiffuseR -* Source code: https://github.com/cran/netdiffuseR -* Date/Publication: 2021-05-28 16:30:08 UTC -* Number of recursive dependencies: 73 - -Run `revdep_details(, "netdiffuseR")` for more info - -
- -## In both - -* checking installed package size ... NOTE - ``` - installed size is 13.0Mb - sub-directories of 1Mb or more: - doc 2.3Mb - libs 8.9Mb - ``` - -# nethet - -
- -* Version: 1.24.0 -* GitHub: NA -* Source code: https://github.com/cran/nethet -* Date/Publication: 2021-05-19 -* Number of recursive dependencies: 97 - -Run `revdep_details(, "nethet")` for more info - -
- -## In both - -* checking whether package ‘nethet’ can be installed ... WARNING - ``` - Found the following significant warnings: - Warning: replacing previous import ‘mclust::dmvnorm’ by ‘mvtnorm::dmvnorm’ when loading ‘nethet’ - Warning: replacing previous import ‘multtest::update’ by ‘stats::update’ when loading ‘nethet’ - See ‘/srv/scratch/z3528859/github/statnet/network/revdep/checks/nethet/new/nethet.Rcheck/00install.out’ for details. - ``` - -* checking R code for possible problems ... NOTE - ``` - screen_shrink: no visible global function definition for - ‘performance.pcor’ - Undefined global functions or variables: - performance.pcor - ``` - -# NetMix - -
- -* Version: 0.2.0 -* GitHub: https://github.com/solivella/NetMix -* Source code: https://github.com/cran/NetMix -* Date/Publication: 2021-03-01 17:40:08 UTC -* Number of recursive dependencies: 49 - -Run `revdep_details(, "NetMix")` for more info - -
- -## In both - -* checking installed package size ... NOTE - ``` - installed size is 8.2Mb - sub-directories of 1Mb or more: - libs 7.9Mb - ``` - -# NetworkChange - -
- -* Version: 0.7 -* GitHub: NA -* Source code: https://github.com/cran/NetworkChange -* Date/Publication: 2020-07-11 22:00:14 UTC -* Number of recursive dependencies: 124 - -Run `revdep_details(, "NetworkChange")` for more info - -
- -## In both - -* checking installed package size ... NOTE - ``` - installed size is 8.7Mb - sub-directories of 1Mb or more: - doc 8.0Mb - ``` - -* checking dependencies in R code ... NOTE - ``` - Namespace in Imports field not imported from: ‘sna’ - All declared Imports should be used. - ``` - -# networkDynamic - -
- -* Version: 0.10.1 -* GitHub: NA -* Source code: https://github.com/cran/networkDynamic -* Date/Publication: 2020-01-21 09:50:02 UTC -* Number of recursive dependencies: 35 - -Run `revdep_details(, "networkDynamic")` for more info - -
- -## In both - -* checking S3 generic/method consistency ... WARNING - ``` - get.edge.attribute: - function(x, ..., el) - get.edge.attribute.active: - function(x, prefix, onset, terminus, length, at, rule, - active.default, dynamic.only, require.active, return.tea, - unlist) - - get.edge.value: - function(x, ...) - get.edge.value.active: - ... - - See section ‘Generic functions and methods’ in the ‘Writing R - Extensions’ manual. - - Found the following apparent S3 methods exported but not registered: - get.edge.attribute.active get.edge.value.active - get.network.attribute.active list.edge.attributes.active - list.network.attributes.active - See section ‘Registering S3 methods’ in the ‘Writing R Extensions’ - manual. - ``` - -* checking Rd \usage sections ... NOTE - ``` - S3 methods shown with full name in documentation object 'attribute.activity.functions': - ‘get.edge.value.active’ ‘get.network.attribute.active’ - ‘list.edge.attributes.active’ ‘list.network.attributes.active’ - - The \usage entries for S3 methods should use the \method markup and not - their full name. - See chapter ‘Writing R documentation files’ in the ‘Writing R - Extensions’ manual. - ``` - -# networksis - -
- -* Version: 2.1-3 -* GitHub: NA -* Source code: https://github.com/cran/networksis -* Date/Publication: 2015-04-16 08:44:42 -* Number of recursive dependencies: 17 - -Run `revdep_details(, "networksis")` for more info - -
- -## In both - -* checking R code for possible problems ... NOTE - ``` - simulate.sisnetwork: no visible global function definition for ‘var’ - Undefined global functions or variables: - var - Consider adding - importFrom("stats", "var") - to your NAMESPACE file. - ``` - -# PAFit - -
- -* Version: 1.1.0.2 -* GitHub: https://github.com/thongphamthe/PAFit -* Source code: https://github.com/cran/PAFit -* Date/Publication: 2021-05-17 21:50:24 UTC -* Number of recursive dependencies: 49 - -Run `revdep_details(, "PAFit")` for more info - -
- -## In both - -* checking whether package ‘PAFit’ can be installed ... WARNING - ``` - Found the following significant warnings: - Warning: no DISPLAY variable so Tk is not available - See ‘/srv/scratch/z3528859/github/statnet/network/revdep/checks/PAFit/new/PAFit.Rcheck/00install.out’ for details. - ``` - -# PDN - -
- -* Version: 0.1.0 -* GitHub: NA -* Source code: https://github.com/cran/PDN -* Date/Publication: 2017-11-03 23:27:43 UTC -* Number of recursive dependencies: 54 - -Run `revdep_details(, "PDN")` for more info - -
- -## In both - -* checking dependencies in R code ... NOTE - ``` - Namespace in Imports field not imported from: ‘glmnet’ - All declared Imports should be used. - ``` - -# PhosR - -
- -* Version: 1.2.0 -* GitHub: NA -* Source code: https://github.com/cran/PhosR -* Date/Publication: 2021-05-19 -* Number of recursive dependencies: 203 - -Run `revdep_details(, "PhosR")` for more info - -
- -## In both - -* checking for hidden files and directories ... NOTE - ``` - Found the following hidden files and directories: - .travis.yml - These were most likely included in error. See section ‘Package - structure’ in the ‘Writing R Extensions’ manual. - ``` - -* checking installed package size ... NOTE - ``` - installed size is 8.7Mb - sub-directories of 1Mb or more: - data 3.3Mb - doc 4.0Mb - ``` - -* checking dependencies in R code ... NOTE - ``` - Unexported objects imported by ':::' calls: - ‘BiocGenerics:::replaceSlots’ ‘S4Vectors:::disableValidity’ - ‘SummarizedExperiment:::.SummarizedExperiment.charbound’ - See the note in ?`:::` about the use of this operator. - ``` - -# pkggraph - -
- -* Version: 0.2.3 -* GitHub: https://github.com/talegari/pkggraph -* Source code: https://github.com/cran/pkggraph -* Date/Publication: 2018-11-15 09:50:03 UTC -* Number of recursive dependencies: 64 - -Run `revdep_details(, "pkggraph")` for more info - -
- -## In both - -* checking installed package size ... NOTE - ``` - installed size is 8.5Mb - sub-directories of 1Mb or more: - doc 8.0Mb - ``` - -# predictionet - -
- -* Version: 1.38.0 -* GitHub: NA -* Source code: https://github.com/cran/predictionet -* Date/Publication: 2021-05-19 -* Number of recursive dependencies: 40 - -Run `revdep_details(, "predictionet")` for more info - -
- -## In both - -* checking for hidden files and directories ... NOTE - ``` - Found the following hidden files and directories: - .BBSoptions - These were most likely included in error. See section ‘Package - structure’ in the ‘Writing R Extensions’ manual. - ``` - -* checking dependencies in R code ... NOTE - ``` - Packages in Depends field not imported from: - ‘catnet’ ‘igraph’ - These packages need to be imported from (in the NAMESPACE file) - for when this namespace is loaded but not attached. - ``` - -* checking R code for possible problems ... NOTE - ``` - .build.regression.regrnet: no visible global function definition for - ‘formula’ - .build.regression.regrnet: no visible global function definition for - ‘lm’ - .build2.mim: no visible global function definition for ‘cor’ - .exportGML: no visible global function definition for ‘vcount’ - .exportGML: no visible global function definition for ‘ecount’ - .get.ii4triplets.gaussian: no visible global function definition for - ‘cor’ - .pred.onegene.bayesnet.fs : : no visible global function - ... - Undefined global functions or variables: - as cnMatParents coefficients complete.cases cor ecount formula lm - quantile sessionInfo vcount - Consider adding - importFrom("methods", "as") - importFrom("stats", "coefficients", "complete.cases", "cor", "formula", - "lm", "quantile") - importFrom("utils", "sessionInfo") - to your NAMESPACE file (and ensure that your DESCRIPTION Imports field - contains 'methods'). - ``` - -* checking compiled code ... NOTE - ``` - File ‘predictionet/libs/predictionet.so’: - Found ‘rand’, possibly from ‘rand’ (C) - Object: ‘mrnet_ensemble_standalone.o’ - Found ‘srand’, possibly from ‘srand’ (C) - Object: ‘mrnet_ensemble_standalone.o’ - - Compiled code should not call entry points which might terminate R nor - write to stdout/stderr instead of to the console, nor use Fortran I/O - nor system RNGs. - - See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual. - ``` - -# PubScore - -
- -* Version: 1.4.0 -* GitHub: NA -* Source code: https://github.com/cran/PubScore -* Date/Publication: 2021-05-19 -* Number of recursive dependencies: 129 - -Run `revdep_details(, "PubScore")` for more info - -
- -## In both - -* checking installed package size ... NOTE - ``` - installed size is 16.4Mb - sub-directories of 1Mb or more: - data 8.1Mb - doc 8.0Mb - ``` - -* checking R code for possible problems ... NOTE - ``` - get_literature_score: no visible binding for global variable - ‘gene2pubmed_db’ - get_literature_score: no visible binding for global variable - ‘hgcn_entrez_reference’ - get_sum_of_weights: no visible binding for global variable ‘Genes’ - get_sum_of_weights: no visible binding for global variable ‘Topic’ - plot_literature_score: no visible binding for global variable ‘Genes’ - plot_literature_score: no visible binding for global variable ‘Topic’ - plot_literature_score: no visible binding for global variable - ‘number_of_articles’ - show,PubScore: no visible binding for global variable ‘pub’ - Undefined global functions or variables: - Genes Topic gene2pubmed_db hgcn_entrez_reference number_of_articles - pub - ``` - -# quanteda.textplots - -
- -* Version: 0.94 -* GitHub: https://github.com/quanteda/quanteda.textplots -* Source code: https://github.com/cran/quanteda.textplots -* Date/Publication: 2021-04-06 07:30:05 UTC -* Number of recursive dependencies: 94 - -Run `revdep_details(, "quanteda.textplots")` for more info - -
- -## In both - -* checking LazyData ... NOTE - ``` - 'LazyData' is specified without a 'data' directory - ``` - -# RSiena - -
- -* Version: 1.3.0 -* GitHub: NA -* Source code: https://github.com/cran/RSiena -* Date/Publication: 2021-05-10 16:22:15 UTC -* Number of recursive dependencies: 21 - -Run `revdep_details(, "RSiena")` for more info - -
- -## In both - -* checking installed package size ... NOTE - ``` - installed size is 20.1Mb - sub-directories of 1Mb or more: - R 2.0Mb - libs 17.2Mb - ``` - -# sand - -
- -* Version: 2.0.0 -* GitHub: https://github.com/kolaczyk/sand -* Source code: https://github.com/cran/sand -* Date/Publication: 2020-07-02 07:20:06 UTC -* Number of recursive dependencies: 163 - -Run `revdep_details(, "sand")` for more info - -
- -## In both - -* checking data for non-ASCII characters ... NOTE - ``` - Note: found 6 marked UTF-8 strings - ``` - -# SBICgraph - -
- -* Version: 1.0.0 -* GitHub: NA -* Source code: https://github.com/cran/SBICgraph -* Date/Publication: 2021-03-02 19:10:09 UTC -* Number of recursive dependencies: 40 - -Run `revdep_details(, "SBICgraph")` for more info - -
- -## In both - -* checking dependencies in R code ... NOTE - ``` - Namespace in Imports field not imported from: ‘network’ - All declared Imports should be used. - ``` - -* checking LazyData ... NOTE - ``` - 'LazyData' is specified without a 'data' directory - ``` - -# sparsebnUtils - -
- -* Version: 0.0.8 -* GitHub: https://github.com/itsrainingdata/sparsebnUtils -* Source code: https://github.com/cran/sparsebnUtils -* Date/Publication: 2021-01-27 06:30:02 UTC -* Number of recursive dependencies: 75 - -Run `revdep_details(, "sparsebnUtils")` for more info - -
- -## In both - -* checking Rd cross-references ... NOTE - ``` - Package unavailable to check Rd xrefs: ‘sparsebn’ - ``` - -# statnetWeb - -
- -* Version: 0.5.6 -* GitHub: NA -* Source code: https://github.com/cran/statnetWeb -* Date/Publication: 2020-08-05 18:00:03 UTC -* Number of recursive dependencies: 53 - -Run `revdep_details(, "statnetWeb")` for more info - -
- -## In both - -* checking LazyData ... NOTE - ``` - 'LazyData' is specified without a 'data' directory - ``` - -# tergmLite - -
- -* Version: 2.2.1 -* GitHub: NA -* Source code: https://github.com/cran/tergmLite -* Date/Publication: 2020-07-22 16:50:03 UTC -* Number of recursive dependencies: 67 - -Run `revdep_details(, "tergmLite")` for more info - -
- -## In both - -* checking LazyData ... NOTE - ``` - 'LazyData' is specified without a 'data' directory - ``` - -# tidygraph - -
- -* Version: 1.2.0 -* GitHub: https://github.com/thomasp85/tidygraph -* Source code: https://github.com/cran/tidygraph -* Date/Publication: 2020-05-12 07:30:03 UTC -* Number of recursive dependencies: 93 - -Run `revdep_details(, "tidygraph")` for more info - -
- -## In both - -* checking LazyData ... NOTE - ``` - 'LazyData' is specified without a 'data' directory - ``` - -# vivid - -
- -* Version: 0.1.0 -* GitHub: NA -* Source code: https://github.com/cran/vivid -* Date/Publication: 2021-04-09 09:10:02 UTC -* Number of recursive dependencies: 205 - -Run `revdep_details(, "vivid")` for more info - -
- -## In both - -* checking tests ... - ``` - ERROR - Running the tests in ‘tests/testthat.R’ failed. - Last 13 lines of output: - `zpath` has type 'NULL', not 'list'. - ── Failure (test_plots.R:203:3): Test zpath ──────────────────────────────────── - `zpath1` has type 'NULL', not 'character'. - ── Failure (test_plots.R:206:3): Test zpath ──────────────────────────────────── - `zpath2` has type 'NULL', not 'character'. - ── Failure (test_plots.R:208:3): Test zpath ──────────────────────────────────── - `zPath(aqVivi, cutoff = 100)` did not throw the expected error. - Backtrace: - █ - 1. └─testthat::expect_error(zPath(aqVivi, cutoff = 100)) test_plots.R:208:2 - 2. └─testthat:::expect_condition_matching(...) - - [ FAIL 15 | WARN 0 | SKIP 0 | PASS 50 ] - Error: Test failures - Execution halted - ``` - -* checking package dependencies ... NOTE - ``` - Package suggested but not available for checking: ‘zenplots’ - ``` - -* checking dependencies in R code ... NOTE - ``` - Namespaces in Imports field not imported from: - ‘RColorBrewer’ ‘colorspace’ ‘tidyr’ - All declared Imports should be used. - ``` - -# xergm.common - -
- -* Version: 1.7.8 -* GitHub: https://github.com/leifeld/xergm.common -* Source code: https://github.com/cran/xergm.common -* Date/Publication: 2020-04-07 09:50:02 UTC -* Number of recursive dependencies: 26 - -Run `revdep_details(, "xergm.common")` for more info - -
- -## In both - -* checking Rd cross-references ... NOTE - ``` - Package unavailable to check Rd xrefs: ‘RSiena’ - ``` -