Repository to calculate frequency of mutations and plot to heatmap from SARS-CoV-2 GISAID data, specifically CoVSurver mutations app for more information about CoVSurver you may access it here https://www.gisaid.org/epiflu-applications/covsurver-mutations-app/
This repository is currently in development and for exercise purposes
- Directly detect mutations from CoVSurver .csv file
- Plot all data into one heatmap file
- Interactive command line, possible for user to prompt an input for specific parameters