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set_config.md

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Set Configuration

To run GoFerret on a new machine, update the relevant paths and settings for your device

Paths

  • home_dir: Directory containing GoFerret (allows the program to be called even when not current working directory)
  • save_dir: Directory in which to save data, must containing folders for each subject (e.g. F1201, F2011 etc.)
  • tank_parent: Directory in which TDT tanks / blocks are saved
  • weight_dir: Directory in which weight metadata is kept
  • high_res_video: Optional, path to video recording script in python
  • split_screen_video: Optional, path to video recording script in python

Settings

  • stimDevice: Name of stimulus generation device (see OpenWorkBench tutorial for more information)
  • recDevice: Name of neural recording device (see OpenWorkBench tutorial for more information)
  • recFerrets: List of subjects in which to record data to TDT tank (all sessions get text logs, but only these subjects get tank records)
  • trackFerrets: List of subjects in which to use high res video (all other subjects will be videoed with the split_screen video)
  • order: Optional, dictionary used to provide metadata to users on the order in which to run ferrets