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tests.yml
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name: Tests
on:
push:
branches: [ master, main ]
workflow_call:
workflow_dispatch:
schedule:
- cron: "0 13 * * 1"
jobs:
lint:
name: Lint Code
runs-on: ubuntu-latest
steps:
- name: Checkout Code
uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: 3.12
- name: Install Dependencies
run: pip install black snakefmt
- name: Run Linter
run: |
black --check .
snakefmt --check *.smk
test-unit:
name: Run Extension Unit Tests
runs-on: ubuntu-latest
steps:
- name: Checkout Code
uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: 3.12
- name: Install Dependencies
run: pip install pytest
- name: Run Unit Tests
run: true #pytest .tests/unit/
# This'll require having a lib within scripts with internal tests
test-e2e:
name: Test Extension with Sunbeam
runs-on: ubuntu-latest
needs:
- test-unit
- lint
steps:
- name: Checkout Code
uses: actions/checkout@v4
- name: Test with Sunbeam
uses: sunbeam-labs/sbx_test_action@v1
#- name: Dump Logs
# shell: bash
# if: always()
# run: tail -n +1 logs/*
#- name: Dump Stats
# shell: bash
# if: always()
# run: cat stats/*