forked from calico/basenji
-
Notifications
You must be signed in to change notification settings - Fork 0
/
prespecified.yml
205 lines (205 loc) · 5.62 KB
/
prespecified.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
name: basenji
channels:
- bioconda
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=main
- _tflow_select=2.3.0=mkl
- absl-py=0.9.0=py36_0
- asciitree=0.3.3=py_2
- astor=0.8.0=py36_0
- astropy=4.0.1.post1=py36h7b6447c_0
- attrs=19.3.0=py_0
- backcall=0.1.0=py36_0
- bedtools=2.29.2=hc088bd4_0
- biopython=1.76=py36h516909a_0
- blas=1.0=mkl
- bleach=3.1.4=py_0
- bokeh=2.0.1=py36h9f0ad1d_0
- bzip2=1.0.8=h516909a_2
- c-ares=1.15.0=h7b6447c_1001
- ca-certificates=2020.1.1=0
- certifi=2020.4.5.1=py36_0
- click=7.1.1=pyh8c360ce_0
- cloudpickle=1.3.0=py_0
- cooler=0.8.6=py_0
- curl=7.69.1=hbc83047_0
- cython=0.29.15=py36he6710b0_0
- cytoolz=0.10.1=py36h516909a_0
- dask=2.14.0=py_0
- dask-core=2.14.0=py_0
- dbus=1.13.12=h746ee38_0
- decorator=4.4.2=py_0
- defusedxml=0.6.0=py_0
- dill=0.3.1.1=py36h9f0ad1d_1
- distributed=2.14.0=py36h9f0ad1d_0
- entrypoints=0.3=py36_0
- expat=2.2.6=he6710b0_0
- fontconfig=2.13.0=h9420a91_0
- freetype=2.9.1=h8a8886c_1
- fsspec=0.7.2=py_0
- gast=0.2.2=py36_0
- glib=2.63.1=h5a9c865_0
- gmp=6.1.2=h6c8ec71_1
- google-pasta=0.2.0=py_0
- grpcio=1.27.2=py36hf8bcb03_0
- gst-plugins-base=1.14.0=hbbd80ab_1
- gstreamer=1.14.0=hb453b48_1
- h5py=2.10.0=py36h7918eee_0
- hdf5=1.10.4=hb1b8bf9_0
- heapdict=1.0.1=py_0
- htslib=1.9=ha228f0b_7
- hypothesis=5.8.3=py_0
- icu=58.2=h9c2bf20_1
- importlib_metadata=1.5.0=py36_0
- intel-openmp=2020.0=166
- intervaltree=3.0.2=py_0
- ipykernel=5.1.4=py36h39e3cac_0
- ipython=7.13.0=py36h5ca1d4c_0
- ipython_genutils=0.2.0=py36_0
- ipywidgets=7.5.1=py_0
- jedi=0.16.0=py36_1
- jinja2=2.11.1=py_0
- joblib=0.14.1=py_0
- jpeg=9b=h024ee3a_2
- jsonschema=3.2.0=py36_0
- jupyter=1.0.0=py36_7
- jupyter_client=6.1.2=py_0
- jupyter_console=6.1.0=py_0
- jupyter_core=4.6.3=py36_0
- keras-applications=1.0.8=py_0
- keras-preprocessing=1.1.0=py_1
- krb5=1.17.1=h173b8e3_0
- ld_impl_linux-64=2.33.1=h53a641e_7
- libcurl=7.69.1=h20c2e04_0
- libdeflate=1.0=h14c3975_1
- libedit=3.1.20181209=hc058e9b_0
- libffi=3.2.1=hd88cf55_4
- libgcc-ng=9.1.0=hdf63c60_0
- libgfortran-ng=7.3.0=hdf63c60_0
- libpng=1.6.37=hbc83047_0
- libprotobuf=3.11.4=hd408876_0
- libsodium=1.0.16=h1bed415_0
- libssh2=1.9.0=h1ba5d50_1
- libstdcxx-ng=9.1.0=hdf63c60_0
- libtiff=4.1.0=h2733197_0
- libuuid=1.0.3=h1bed415_2
- libxcb=1.13=h1bed415_1
- libxml2=2.9.9=hea5a465_1
- locket=0.2.0=py_2
- markdown=3.1.1=py36_0
- markupsafe=1.1.1=py36h7b6447c_0
- mistune=0.8.4=py36h7b6447c_0
- mkl=2020.0=166
- mkl-service=2.3.0=py36he904b0f_0
- mkl_fft=1.0.15=py36ha843d7b_0
- mkl_random=1.1.0=py36hd6b4f25_0
- more-itertools=8.2.0=py_0
- msgpack-python=1.0.0=py36hdb11119_1
- multiprocess=0.70.9=py36h8c4c3a4_1
- nbconvert=5.6.1=py36_0
- nbformat=5.0.4=py_0
- ncurses=6.2=he6710b0_0
- notebook=6.0.3=py36_0
- numpy=1.18.1=py36h4f9e942_0
- numpy-base=1.18.1=py36hde5b4d6_1
- olefile=0.46=py_0
- openssl=1.1.1f=h7b6447c_0
- opt_einsum=3.1.0=py_0
- packaging=20.1=py_0
- pairix=0.3.7=py36h84994c4_0
- pandas=1.0.3=py36h0573a6f_0
- pandoc=2.2.3.2=0
- pandocfilters=1.4.2=py36_1
- parso=0.6.2=py_0
- partd=1.1.0=py_0
- pcre=8.43=he6710b0_0
- pexpect=4.8.0=py36_0
- pickleshare=0.7.5=py36_0
- pillow=7.0.0=py36hb39fc2d_0
- pip=20.0.2=py36_1
- pluggy=0.13.1=py36_0
- prometheus_client=0.7.1=py_0
- prompt-toolkit=3.0.4=py_0
- prompt_toolkit=3.0.4=0
- protobuf=3.11.4=py36he6710b0_0
- psutil=5.7.0=py36h8c4c3a4_1
- ptyprocess=0.6.0=py36_0
- py=1.8.1=py_0
- pybedtools=0.8.1=py36he513fc3_0
- pybigwig=0.3.17=py36hc013797_0
- pyfaidx=0.5.8=py_1
- pygments=2.6.1=py_0
- pyparsing=2.4.7=pyh9f0ad1d_0
- pyqt=5.9.2=py36h05f1152_2
- pyrsistent=0.16.0=py36h7b6447c_0
- pysam=0.15.3=py36hda2845c_1
- pytest=5.4.1=py36_0
- pytest-arraydiff=0.3=py36h39e3cac_0
- pytest-astropy=0.8.0=py_0
- pytest-astropy-header=0.1.2=py_0
- pytest-doctestplus=0.5.0=py_0
- pytest-openfiles=0.4.0=py_0
- pytest-remotedata=0.3.2=py36_0
- python=3.6.10=hcf32534_1
- python-dateutil=2.8.1=py_0
- python_abi=3.6=1_cp36m
- pytz=2019.3=py_0
- pyyaml=5.3.1=py36h8c4c3a4_0
- pyzmq=18.1.1=py36he6710b0_0
- qt=5.9.7=h5867ecd_1
- qtconsole=4.7.2=py_0
- qtpy=1.9.0=py_0
- readline=8.0=h7b6447c_0
- scikit-learn=0.22.1=py36hd81dba3_0
- scipy=1.4.1=py36h0b6359f_0
- send2trash=1.5.0=py36_0
- setuptools=46.1.3=py36_0
- sip=4.19.8=py36hf484d3e_0
- six=1.14.0=py36_0
- sortedcontainers=2.1.0=py_0
- sqlite=3.31.1=h7b6447c_0
- tblib=1.6.0=py_0
- tensorboard=1.15.0=pyhb230dea_0
- tensorflow=1.15.0=mkl_py36h4920b83_0
- tensorflow-base=1.15.0=mkl_py36he1670d9_0
- tensorflow-estimator=1.15.1=pyh2649769_0
- termcolor=1.1.0=py36_1
- terminado=0.8.3=py36_0
- testpath=0.4.4=py_0
- tk=8.6.8=hbc83047_0
- toolz=0.10.0=py_0
- tornado=6.0.4=py36h7b6447c_1
- traitlets=4.3.3=py36_0
- typing_extensions=3.7.4.1=py36h9f0ad1d_3
- wcwidth=0.1.9=py_0
- webencodings=0.5.1=py36_1
- werkzeug=0.16.1=py_0
- wheel=0.34.2=py36_0
- widgetsnbextension=3.5.1=py36_0
- wrapt=1.12.1=py36h7b6447c_1
- xz=5.2.5=h7b6447c_0
- yaml=0.2.4=h516909a_0
- zeromq=4.3.1=he6710b0_3
- zict=2.0.0=py_0
- zipp=2.2.0=py_0
- zlib=1.2.11=h7b6447c_3
- zstd=1.3.7=h0b5b093_0
- pip:
- bioframe==0.0.10
- chardet==3.0.4
- cooltools==0.3.0
- cycler==0.10.0
- idna==2.9
- kiwisolver==1.2.0
- llvmlite==0.32.0
- matplotlib==3.2.1
- networkx==2.4
- numba==0.49.0
- numexpr==2.7.1
- requests==2.23.0
- seaborn==0.10.0
- tables==3.6.1
- urllib3==1.25.9
prefix: /home/lchumpitaz/anaconda3/envs/akita