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prep for release
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‎NAMESPACE

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export(.E)
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export(.G)
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export(.N)
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export(.free_graph_context)
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export(.graph_context)
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export(.register_graph_context)
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export(activate)

‎cran-comments.md

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Minor release fixing changes from igraph and dplyr
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Minor release with a bunch of new features and bug fixes. No changes to worse
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detected in reverse dependencies
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## revdepcheck results
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We checked 52 reverse dependencies (51 from CRAN + 1 from Bioconductor), comparing R CMD check results across CRAN and dev versions of this package.
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We checked 52 reverse dependencies (50 from CRAN + 2 from Bioconductor), comparing R CMD check results across CRAN and dev versions of this package.
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* We saw 0 new problems
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* We failed to check 2 packages
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* We failed to check 1 packages
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Issues with CRAN packages are summarised below.
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### Failed to check
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* numbat (NA)
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* Platypus (NA)
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* numbat (NA)

‎revdep/README.md

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## Failed to check (3)
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|package |version |error |warning |note |
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|:--------|:-------|:-----|:-------|:----|
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|numbat |? | | | |
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|Platypus |? | | | |
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|NA |? | | | |
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|package |version |error |warning |note |
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|:-------|:-------|:-----|:-------|:----|
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|NA |? | | | |
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|numbat |? | | | |
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|NA |? | | | |
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‎revdep/cran.md

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## revdepcheck results
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We checked 52 reverse dependencies (51 from CRAN + 1 from Bioconductor), comparing R CMD check results across CRAN and dev versions of this package.
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We checked 52 reverse dependencies (50 from CRAN + 2 from Bioconductor), comparing R CMD check results across CRAN and dev versions of this package.
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* We saw 0 new problems
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* We failed to check 2 packages
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* We failed to check 1 packages
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Issues with CRAN packages are summarised below.
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### Failed to check
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* numbat (NA)
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* Platypus (NA)
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* numbat (NA)

‎revdep/failures.md

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# numbat
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# NA
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<details>
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* Version: 1.2.1
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* GitHub: https://github.com/kharchenkolab/numbat
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* Source code: https://github.com/cran/numbat
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* Date/Publication: 2023-01-11 00:20:02 UTC
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* Number of recursive dependencies: 132
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* Version: NA
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* GitHub: NA
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* Source code: https://github.com/cran/NA
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* Number of recursive dependencies: 0
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Run `cloud_details(, "numbat")` for more info
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Run `cloud_details(, "NA")` for more info
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</details>
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### Devel
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```
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* using log directory ‘/tmp/workdir/numbat/new/numbat.Rcheck’
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* using R version 4.1.1 (2021-08-10)
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* using platform: x86_64-pc-linux-gnu (64-bit)
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* using session charset: UTF-8
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* using option ‘--no-manual’
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* checking for file ‘numbat/DESCRIPTION’ ... OK
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* this is package ‘numbat’ version ‘1.2.1’
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* package encoding: UTF-8
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* checking package namespace information ... OK
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* checking package dependencies ... ERROR
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Packages required but not available: 'ggtree', 'scistreer'
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See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
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manual.
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* DONE
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Status: 1 ERROR
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### CRAN
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```
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* using log directory ‘/tmp/workdir/numbat/old/numbat.Rcheck’
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* using R version 4.1.1 (2021-08-10)
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* using platform: x86_64-pc-linux-gnu (64-bit)
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* using session charset: UTF-8
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* using option ‘--no-manual’
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* checking for file ‘numbat/DESCRIPTION’ ... OK
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* this is package ‘numbat’ version ‘1.2.1’
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* package encoding: UTF-8
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* checking package namespace information ... OK
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* checking package dependencies ... ERROR
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Packages required but not available: 'ggtree', 'scistreer'
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See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
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manual.
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* DONE
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Status: 1 ERROR
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```
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# Platypus
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# numbat
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<details>
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* Version: 3.4.1
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* GitHub: NA
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* Source code: https://github.com/cran/Platypus
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* Date/Publication: 2022-08-15 07:20:20 UTC
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* Number of recursive dependencies: 356
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* Version: 1.3.2-1
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* GitHub: https://github.com/kharchenkolab/numbat
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* Source code: https://github.com/cran/numbat
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* Date/Publication: 2023-06-17 18:50:02 UTC
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* Number of recursive dependencies: 135
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Run `cloud_details(, "Platypus")` for more info
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Run `cloud_details(, "numbat")` for more info
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</details>
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### Devel
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```
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* using log directory ‘/tmp/workdir/Platypus/new/Platypus.Rcheck’
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* using log directory ‘/tmp/workdir/numbat/new/numbat.Rcheck’
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* using R version 4.1.1 (2021-08-10)
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* using platform: x86_64-pc-linux-gnu (64-bit)
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* using session charset: UTF-8
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* using option ‘--no-manual’
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* checking for file ‘Platypus/DESCRIPTION’ ... OK
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* checking extension type ... Package
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* this is package ‘Platypus’ version ‘3.4.1’
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* checking for file ‘numbat/DESCRIPTION’ ... OK
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* this is package ‘numbat’ version ‘1.3.2-1’
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* package encoding: UTF-8
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* checking package namespace information ... OK
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...
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* checking package dependencies ... ERROR
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Package required but not available: ‘ggtree’
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Packages suggested but not available for checking:
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'Matrix.utils', 'monocle3', 'ProjecTILs', 'SeuratWrappers'
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Packages required but not available: 'ggtree', 'scistreer'
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See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
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manual.
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### CRAN
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```
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* using log directory ‘/tmp/workdir/Platypus/old/Platypus.Rcheck’
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* using log directory ‘/tmp/workdir/numbat/old/numbat.Rcheck’
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* using R version 4.1.1 (2021-08-10)
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* using platform: x86_64-pc-linux-gnu (64-bit)
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* using session charset: UTF-8
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* using option ‘--no-manual’
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* checking for file ‘Platypus/DESCRIPTION’ ... OK
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* checking extension type ... Package
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* this is package ‘Platypus’ version ‘3.4.1’
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* checking for file ‘numbat/DESCRIPTION’ ... OK
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* this is package ‘numbat’ version ‘1.3.2-1’
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* package encoding: UTF-8
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* checking package namespace information ... OK
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...
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* checking package dependencies ... ERROR
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Package required but not available: ‘ggtree’
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Packages suggested but not available for checking:
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'Matrix.utils', 'monocle3', 'ProjecTILs', 'SeuratWrappers'
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Packages required but not available: 'ggtree', 'scistreer'
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See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
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manual.

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