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swiss-covid-epidemic

This repository contains data and R code files from the following publications:

  1. Althaus CL, Probst D, Hauser A, Riou J. (2020) Time is of the essence: containment of the SARS-CoV-2 epidemic in Switzerland from February to May 2020.

    • swiss_covid_epidemic_CH.R
    • swiss_covid_epidemic_CH.csv

  2. Emmenegger M, et al. (2020) Early plateau of SARS-CoV-2 seroprevalence identified by tripartite immunoassay in a large population of the greater area of Zurich, Switzerland.

    • swiss_covid_epidemic_ZH.R
    • swiss_covid_epidemic_ZH.csv

Running the scripts

To guarantee reproducibility, please install the required packages using packrat:

packrat::restore()