nautilus script for handy nifti manipulations via right click. Work also in other file manager of other linux disto. Just find the folder where to place the files.
- save the script in: $HOME/.local/share/nautilus/scripts
- open terminal there and 'chmod +x $(ls)'
Requirements:
- FSL
- ANTs
- Python [imageio, numpy, nibabel, scipy.ndimage,matplotlib]
- docker freesurfer/synthstrip