🫧🧬 From fragmented assemblies to high-quality bacteriophage genomes
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Updated
Jul 7, 2024 - Python
🫧🧬 From fragmented assemblies to high-quality bacteriophage genomes
A curated list of phage related software and computational resources for phage scientists, bioinformaticians and enthusiasts.
Fast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomes
A reconfigurable machine learning pipeline for labeling ORFs/proteins in bacteriophage genomes and metagenomic data.
The PhageBox is a digital microfluidics device that integrates temperature and magnetic control modules at the hardware level. This repository contains the embedded software which contains a finite state machine for representing PCR and a graphical user interface for visual feedback and operation.
A proof-of-concept, automated and reproducible pipeline for predicting functional associations between pVOGs.
PhageFilter uses a Sequence Bloom Tree (SBT) to filter bacteriophage reads from metagenomic files.
Fast and accurate tool for calculating Average Nucleotide Identity (ANI) among virus and bacteria genomes
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