R scripts to reproduce analyses in our paper comparing clustering methods for high-dimensional cytometry data

R scripts to reproduce analyses in our paper comparing clustering methods for high-dimensional cytometry data

This repo is deprecated. Use https://github.com/plantarum/flowPloidy instead!

Specialized clinical laboratory static file system manager.

FCS (3.0, 3.1) data and metadata extractor

Basic functionality to create circos plot that shows concurrent positivity of flow cytometry markers.

Immunology Informatics - Big Data Analysis in Immunology - Tutorials

A collection of visualization examples for Flow Cytometry Data

Correction for flow cytometry histograms when part of the population is in noise

A library for analyzing flow cytometry data

cytoDiv is a R function that calculates ecological diversity indices for a microbial community based on its bio-optical properties measured at the single cell level by flow cytometry. The indices express the organization and structure of a community, its richness in physiological and genetic variations. The equations used to calculate the indice…

Flow cytometry ETL application.

Plugin Gating Functions for openCyto

Shiny Modules for visualizing flow cytometry data

CytoVas fcs uploader and file browser

batch-titration is a container that allows for one or more fcs files to be automatically processed (using AWS Batch or other runners). It produces an html document.

parse fcs files in s3 and store various metadata in dynamodb

Repository accompanying the paper "Flow cytometric single-cell identification of populations in synthetic bacterial communities".

Django-based Repository for Flow Cytometry Data