MuSTA: Multi-Sample Transcriptome Assembly for long-read isoform sequencing

Nextflow Pipeline for Strain Resolution from Long Reads

The web genome viewer is live at https://icemduru.github.io/listeria_ro15_transcript/

Research-longread about renewables developpement in Russia

🏭 article about Factory Records label

iSofOrmS annoTAtoR pipeline

A collection of plots for long read sequencing FastQ files from devices like Oxford Nanopore's MinION and PromethION.

10X single cell Nanopore reads simulation workflow. Complete documentation avialable at: https://GenomiqueENS.github.io/AsaruSim/

An analysis pipeline for Nanopore direct-RNA sequencing

STRspy: a novel alignment and quantification-based state-of-the-art method, short tandem repeat (STR) detection calling tool designed specifically for long-read sequencing reads such as from Oxford nanopore technology (ONT) and PacBio.

Chromosome Scale Assembler: A high-throughput chromosome scale genome assembly pipeline for vertebrate genomes

Parallel String Graph Construction, Transitive Reduction, and Contig Generation for De Novo Genome Assembly

Rust bindings to minimap2 library

WYSIWYG block editor jQuery plugin.