Meiotic Recombination Detection Pipeline with PacBio HiFi sequencing reads
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Updated
Dec 24, 2022 - Python
Meiotic Recombination Detection Pipeline with PacBio HiFi sequencing reads
Adapter+Barcode trimming from Pacbio HiFi reads
pacbiohifi view using awk
a string extraction and checker written for pacbiohifi and oxford nanopore reads
profiling pacbiokmers and filtering pacbio kmers
pacbiohifi read analyzer using recursion
go driven pacbiohifi sam sort for browser requests and caching
awk utilites for anlyzing pacbiohifi genomes and reads
Scripts for de-novo genome assembly, assembly polishing, QC and post-assemble analyses of HiFi whole genome sequence data and downstream pangenomics analyses to identify structural variants
a streamlit application for graphical analyisis of pacbiohifi reads
extracting specific motifs from pacbio and oxford nanopore long reads.
kmer profile for pacbiohifi reads in julia language
codegetter for illumina, pacbio and oxford long read and short reads
polyATGC pacbio/oxford nanopore estimator
Variant calling pipeline for Pacbio Hifi reads
pacbio/oxford nanopore long reads repeat coverage estimation
streaming visualization of pacbiohifi reads
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