Wow! an RNA-seq pipeline.

create etl pipeline from different sources i.e wikipedia json file , rating and kaggle csv file

A simple dag for triggering the Cloud Data Fusion Pipeline using Apache Airflow.

Presentation about the {stantargets} R package

🐍 🧬 Turning my metagenomic MAG (metagenome-assembled genome) pipeline into a snakemake pipeline for increased reproducibility and scalability.

github CI/CD

Pipelines used for connecting Git repository and Docker with Jenkins.

Provisioning Vault with Ansible and running by Docker as a container or by Jenkins as a job

Bust is a dagger pipeline orchestrator. It provides a preset of pipelines used in my own projects

The pipeline uses dbt as the data transformation tool, Great Expectations as the data quality tool, and Preset as the data visualization tool. The pipeline extracts data from different data sources, transforms the data using dbt, applies data quality checks using Great Expectations, and then visualizes the data using Preset.

A Snakemake pipeline for RNA Seq Variant Calling

Devops assignment based on Jenkins

Nextflow pipeline for genomic analysis.

NextFlow dsl2 pipeline for RNASeq analysis

Demonstration of multi-project pipeline with Quarto reports

Automate ChatGPT prompt execution with workers

Pipeline webscraping to extract and download Solanum lycopersicum promotors