Jupyter Notebooks to reproduce analysis with dief R package

A reproducible analysis of environmental data - from hardware to plot

An R package for data archiving and linking with code

A Python package for data archiving and linking with code

a Python toolbox for reproducible analysis and visualization of NeuroPhysiological data.

Code and data to recreate figures and analyses for our Scientific Reports paper "Cold exposure induces dynamic, heterogeneous alterations in human brown adipose tissue lipid content".

R utility functions

A bookdown project of best programmer practices for intermediate R and Python programmers

Reproducing the results reported in a preprint during ReproHack2019 (Leiden).

Practical Guide to Reproducibility in Bioinformatics (Work In Progress)

TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020

Python utility functions

Python Citations Generator

Seeking alternative stable states in a deep lake (Bruel et al 2018) — reproduce analysis.

Reproducible analysis with R, Python and Snakemake via Conda

Live code in Pandoc Markdown

Epidemiologia de Doenças de Plantas Aplicada com R

Working repository to turn the COBIDAS guidelines to report methods and results in neuroimaging into a user friendly checklist

A curated list of reproducible research case studies, projects, tutorials, and media