Python package to plot sequence logos

Motif manipulation functions for R.

Javascript package for embedding sequence logos

Logo2PWM is a tool to convert sequence logo back to position weight matrix

MetaLogo: a heterogeneity-aware sequence logo generator and aligner

Sequence Logos based on maximum values is an alternative that provides full control over how the graphics of a Sequence Logo should look like. All the inner workings of this open source application are written in native javascript. The application is independent of the internet.

Ordered Sequence Logo based on existing matrices is an alternative that provides full control over how the graphics of a Sequence Logo should look like. All the inner workings of this open source application are written in native javascript. The application is independent of the internet once it is saved as html.

Transcription Factor (TF) binding preference prediction using deep neural networks.

Sequence Logo - relative style with axes is an alternative that provides full control over how the graphics of a Sequence Logo should look like. All the inner workings of this open source application are written in native javascript. The application is independent of the internet once it is saved as a html file.

Sequence logo generation with d3

Visualising RNA-RNA interactions

This project is about visualizing DNA or protein sequence data. The goal of this project is to help physicians find relation between different type of cancer or same cancer but different patients. So far three types of logo can be generated. These are Sequence logo, Mutation logo and Multiview logo. Sequence logo counts the frequency of nucleobases

Sequence Logo - block style with axes (native Java Script) is an alternative that provides full control over how the graphics of a Sequence Logo should look like. All the inner workings of this open source application are written in native javascript. The application is independent of the internet.

Python version of ggseqlogo. Based on plotnine (Python version of ggplot2). A derivative of plotnineSeqSuite.

MAGPIE

This implementation is an alternative that provides full control over how the graphics of a Sequence Logo should look like, and is an alternative to an application called WebLogo. All the inner workings of this open source application are written in native javascript. The application is independent of the internet once it is saved as a html file.

plotnineSeqSuite: a Python package for visualizing sequence data using ggplot2 style

React sequence logo component