Automated processing of single echo (SE), multi-echo (ME) fMRI, ASLBOLD and VBM in SPM12.

PNH segmentation pipelines based on nipype

TMFC toolbox - a new SPM toolbox for whole-brain task-modulated functional connectivity (TMFC) analysis with user-friendly graphical interface.

TMFC toolbox - a new SPM toolbox for whole-brain task-modulated functional connectivity (TMFC) analysis with user-friendly graphical interface.

SPM tools for preprocessing fMRI series: slice time correction for fMRI scans using Simultaneous MultiSlice (SMS) / MultiBand / HyperBand and echo combination for Multi Echo EPI

an SPM centric BIDS app

Set of Octave and Matlab functions, demos and scripts to help manage ROIs and to play nice with BIDS datasets. Mostly volume-based and SPM centric.

SPM Containers (Docker & Singularity)

SPM Documentation

A simple recipe to convert your neuroimaging data into a BIDS dataset.

Convert MP2RAGE with non-bijective UNI-T1 transfer curves to R1-maps

Playground for active inference in Python

Bayesian inference toolbox for SPM12

Repo for NMDA@FU-Berlin SoSe24

This repository suggests an organized pipeline for spatial preprocessing of fMRI data (both task-based and resting-state).

This GitHub repository contains code and data for a assignment investigating the brain's auditory networks using functional Magnetic Resonance Imaging (fMRI).

Docker image of CAT12 (standalone version)

SPM implementation of https://github.com/JosePMarques/MP2RAGE-related-scripts

SPMLauncher provides an overview over your SPM and MATLAB installations, allows you to quickly enable or disable toolboxes and switch versions.