posters that i presented at the conferences i attended as a phd student and postdoc
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Jul 17, 2023
#
systemsbiology
Here are 12 public repositories matching this topic...
The (rendered) website of the Resendis lab. Do not send PRs here! Use https://github.com/resendislab/website instead!
bioinformatics
genomics
cancer
systems-biology
computational-biology
systemsbiology
computational-science
genomic-sciences
sciences
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Sep 10, 2024 - HTML
Data portal and API for Center for Viral Systems Biology (CViSB) data
biology
systems-biology
sequencing
immunology
systemsbiology
hla
viral-ngs
viral-genomics
ebola
viral-metagenomics
ebola-outbreak
hla-database
hla-typing
ngs-data
immunological-bioinformatics
viral-diversity
viral-allele
lassa
lassa-fever
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Jan 13, 2023 - TypeScript
"Introduction to Dynamical Models in Biology" is an NPTEL online course. Slides of the lectures and codes used in this course are maintained in this repository. https://youtube.com/playlist?list=PLAr_6rURpoVinZGlJAKwBGuQjLWSU_fvv&si=_wdCqCK_lwdLzWtx
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Jun 13, 2024
Analyzing the impact of the large deletion on the metabolic level by using genome-scale metabolic network (GEM)
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Jun 22, 2022 - Jupyter Notebook
Shiny app for visualization of the toy GENREs
visualization
docker
shiny
rpython
network-visualization
systemsbiology
shinyapps
cobrapy
flux-balance-analysis
fba
toycon
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Jul 14, 2021 - R
Graph representation for system biology networks and the reduction of them for machine learning purposes
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Apr 11, 2023 - Python
To analyze the Mathematical Model for ODE systems.
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Apr 30, 2022 - Python
R package for RIVER (RNA-Informed Variant Effect on Regulation)
genetics
clustering
snp
bayesian
transcription
geneticvariability
functionalprediction
generegulation
genomicvariation
biomedicalinformatics
functionalgenomics
systemsbiology
transcriptomics
transcriptomevariant
variant
functional-variants
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Mar 5, 2020 - R
Advanced Multilanguage Interface to CVODES and IDAS
python
simulation
modeling
ode
pysb
parameter-estimation
systemsbiology
differentialequations
cvode
sensitivity-analysis
sensitivities
hacktoberfest
sbml
adjoint-sensitivities
forward-sensitivities
kinetic-modeling
mechanistic-models
cvodes
idas
petab
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Nov 9, 2024 - Jupyter Notebook
Repository of tutorials for The COBRA Toolbox
tutorials
reconstruction
systemsbiology
cobra
metabolic-models
constraint-based-modeling
cobratoolbox
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Nov 4, 2024 - MATLAB
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