From 402556f50287e2bfcfeccf67edb501d651c5ec1f Mon Sep 17 00:00:00 2001 From: Thu-Hien To Date: Tue, 10 Mar 2020 13:16:38 +0100 Subject: [PATCH] edit README --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index 1ce49ec..30de2bd 100644 --- a/README.md +++ b/README.md @@ -139,7 +139,7 @@ Variance is used to penalize long branch lengths. The variance formula of each b `./lsd2 -i rootedtree_file -d date_file -c -r l` - - You want to calculate confidence intervals from 100 simulated trees. The sequence length used to build your tree was 1000, and you'd like to apply a lognormal relaxed clock on the simulated branch lengths of standard deviation 0.4. + - You want to calculate confidence intervals from 100 simulated trees. The sequence length used to build your tree was 1000, and you'd like to apply a lognormal relaxed clock of standard deviation 0.4 to the simulated branch lengths. `./lsd2 -i rootedtree_file -d date_file -c -r l -f 100 -s 1000 -q 0.4`