R4.3 and RandomFieldsUtils_0.6.6 failed to install

[matt-shenton]

Hi there
on R4.3.1 on MacOS ventura 13.6
.. OK now I realise there is a message about C86 and x64, so new mac architecture unsupported. OK

Also on Ubuntu 20.04 R 4.3.2 it fails as below.
Many thanks
Matt

g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -fopenmp -msse2 -mssse3 -mavx2 -fpic -g -O2 -fdebug-prefix-map=/build/r-base-DdVjkr/r-base-4.3.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c options.cc -o options.o
In file included from options.cc:23:
Basic_utils.h:123:7: error: ‘INT_MIN’ was not declared in this scope
123 | Nan=INT_MIN
| ^~~~~~~
In file included from options.cc:23:
Basic_utils.h:34:1: note: ‘INT_MIN’ is defined in header ‘’; did you forget to ‘#include ’?
33 | #include "AutoRandomFieldsUtils.h"
+++ |+#include
34 |
make: *** [/usr/lib/R/etc/Makeconf:198: options.o] Error 1
ERROR: compilation failed for package ‘RandomFieldsUtils’

• removing ‘/home/mshenton/analysis/LDplot/renv/library/R-4.3/x86_64-pc-linux-gnu/RandomFieldsUtils’
  Warning message:
  In utils::install.packages("./RandomFieldsUtils_0.6.6.tar.gz", type = "source", :
  installation of package ‘./RandomFieldsUtils_0.6.6.tar.gz’ had non-zero exit status

[tpook92]

Dear Matt,

Thanks for the report. This is not only a Mac issue but general issue between RandomFieldsUtils and R4.3.1+
We are on it but its a bit more complicated issue. For now I would recommend it stay with R.4.2 or lower.

Best regards
Torsten

[matt-shenton]

Thanks Torsten. Happy New Year!

[david-cros]

Hello Torsten,
Did you solve this issue ? I try to install HaploBlocker on R 4.4 but it fails, saying "Erreur : package 'RandomFieldsUtils' 1.2.5 was found, but >= 1.4 is required by 'HaploBlocker'". And I only find 'RandomFieldsUtils' 1.2.5...
Thanks,
David

[david-cros]

I finally found "RandomFieldsUtils_1.5.1.1.tar.gz" in your directory and it works now :-)