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r740: increased default -k for correct
1 parent eef990d commit aa6e1b0

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-2
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2 files changed

+2
-2
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correct.c

+1-1
Original file line numberDiff line numberDiff line change
@@ -311,7 +311,7 @@ int fm6_ec_correct(const rld_t *e, fmecopt_t *opt, const char *fn, int _n_thread
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pthread_attr_t attr;
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if (opt->w < 0) { // determine k-mer
314-
opt->w = (int)(log(e->mcnt[0]) / log(4) + 6.499);
314+
opt->w = (int)(log(e->mcnt[0]) / log(4) + 8.499);
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if (opt->w >= MAX_KMER) opt->w = MAX_KMER;
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if (fm_verbose >= 3)
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fprintf(stderr, "[M::%s] set k-mer length to %d\n", __func__, opt->w);

fermi.h

+1-1
Original file line numberDiff line numberDiff line change
@@ -4,7 +4,7 @@
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#include <stdint.h>
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#include <stdlib.h>
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7-
#define FERMI_VERSION "1.0-r739"
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#define FERMI_VERSION "1.0-r740"
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#define FM_MASK30 0x3fffffff
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