From dc675ce0f2821d2a1008bfd93b0a16661777c759 Mon Sep 17 00:00:00 2001 From: trislett Date: Thu, 14 Nov 2019 10:51:49 +0100 Subject: [PATCH] Update README.md --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index dead4ec..60bd945 100644 --- a/README.md +++ b/README.md @@ -7,7 +7,7 @@ There are essentially two steps: (a) Inter-modality, intrasubject registration o The software requires tight brain extractions for the T1w images. Brain extraction using [antsBrainExtraction.sh](https://github.com/ANTsX/ANTs/blob/master/Scripts/antsBrainExtraction.sh) and based on recommended settings from [fMRIprep](https://fmriprep.readthedocs.io/en/latest/workflows.html#brain-extraction-brain-tissue-segmentation-and-spatial-normalization). -It is also possible to use ants_tbss (--othermodality) for registration of other modalities such as fMRI (e.g., betted example_func.nii.gz) to B0, and use the previously calculated transformations to native space and standard space. +It is also possible to use ants_tbss (--othermodality) for registration of other modalities such as fMRI (e.g., betted example_func.nii.gz) to B0-in-native-T1w, and use the previously calculated transformations to native space and standard space. [voxel_slices](bin/voxel_slices) is also installed for fast production quality controls images.