From 786b77fdb9a794c85b701e3609cf1556de2f913c Mon Sep 17 00:00:00 2001
From: Pouryafard75 <pouryafard75@gmail.com>
Date: Sat, 10 Feb 2024 19:59:40 -0500
Subject: [PATCH 1/3] Parameterize project version

---
 build.gradle | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/build.gradle b/build.gradle
index d2ecf26c42..4f7ac3e9cd 100644
--- a/build.gradle
+++ b/build.gradle
@@ -9,7 +9,9 @@ plugins {
 }
 
 group = "com.github.tsantalis"
-version = "3.0.4"
+def version = project.hasProperty('version') ?
+        project.version
+        : '3.0.4'
 
 applicationName = rootProject.name
 mainClassName = "org.refactoringminer.RefactoringMiner"

From 9537345afa1053f4db59e1e579059eaa0604835d Mon Sep 17 00:00:00 2001
From: pouryafard75 <pouryafard75@gmail.com>
Date: Sat, 10 Feb 2024 21:08:17 -0500
Subject: [PATCH 2/3] Create benchmark workflow

---
 .github/workflows/benchmark.yml | 51 +++++++++++++++++++++++++++++++++
 1 file changed, 51 insertions(+)
 create mode 100644 .github/workflows/benchmark.yml

diff --git a/.github/workflows/benchmark.yml b/.github/workflows/benchmark.yml
new file mode 100644
index 0000000000..96afdcee2f
--- /dev/null
+++ b/.github/workflows/benchmark.yml
@@ -0,0 +1,51 @@
+name: Benchmark
+
+on:
+  workflow_dispatch:
+  repository_dispatch:
+    types: [run-project]
+
+jobs:
+  build-and-run-project:
+    runs-on: ubuntu-latest
+
+    env:
+      OAuthToken: ${{ secrets.OAUTHTOKEN }} 
+      releaseVersion: CI-benchmark-SNAPSHOT
+
+    steps:
+      - uses: actions/checkout@v4
+      - name: Set up JDK 17
+        uses: actions/setup-java@v4
+        with:
+          java-version: '17'
+          distribution: 'temurin'
+
+      - name: Checkout code
+        uses: actions/checkout@v2
+
+      # Build the project and publish to Maven local
+      - name: Publish to Maven local
+        run: ./gradlew publishToMavenLocal -x test -x javadoc -Pversion=${{ env.releaseVersion }}
+
+      # Clone the DiffBenchmark repository and run benchmarks
+      - name: Clone DiffBenchmark repository and run benchmarks
+        run: |
+          git clone -b automation --depth 1 --single-branch https://github.com/pouryafard75/DiffBenchmark.git &&
+          cd DiffBenchmark &&
+          ./gradlew -b build.gradle clean run \
+          -PrefactoringMinerVersion=${{ env.releaseVersion }} \
+          -DrefactoringMinerPath=$(pwd)/.. \
+          -PmainClass=benchmark.CmdRunner \
+          --args="refOracle defects4j"
+
+      - name: Zip directory
+        run: |
+          zip -r Stats.zip DiffBenchmark/out/oracle/
+
+
+      - name: Upload artifact
+        uses: actions/upload-artifact@v2
+        with:
+          name: Stats
+          path: Stats.zip

From d03b197be60fbe9ffb6fc3ac19ccb054c8071789 Mon Sep 17 00:00:00 2001
From: Pouryafard75 <pouryafard75@gmail.com>
Date: Tue, 13 Feb 2024 12:23:46 -0500
Subject: [PATCH 3/3] ASTDiff: Move the passing case to perfect diffs

---
 src/test/resources/astDiff/defects4j/cases-problematic.json | 3 ---
 src/test/resources/astDiff/defects4j/cases.json             | 3 +++
 2 files changed, 3 insertions(+), 3 deletions(-)

diff --git a/src/test/resources/astDiff/defects4j/cases-problematic.json b/src/test/resources/astDiff/defects4j/cases-problematic.json
index 27dfd6f71a..3fcb54b5b6 100644
--- a/src/test/resources/astDiff/defects4j/cases-problematic.json
+++ b/src/test/resources/astDiff/defects4j/cases-problematic.json
@@ -310,9 +310,6 @@
 }, {
   "repo" : "JacksonDatabind",
   "commit" : "22"
-}, {
-  "repo" : "Jsoup",
-  "commit" : "16"
 }, {
   "repo" : "Codec",
   "commit" : "14"
diff --git a/src/test/resources/astDiff/defects4j/cases.json b/src/test/resources/astDiff/defects4j/cases.json
index 574e3cd01f..6d4e9781df 100644
--- a/src/test/resources/astDiff/defects4j/cases.json
+++ b/src/test/resources/astDiff/defects4j/cases.json
@@ -2045,6 +2045,9 @@
   "repo" : "Mockito",
   "commit" : "10"
 },{
+  "repo" : "Jsoup",
+  "commit" : "16"
+}, {
   "repo" : "Jsoup",
   "commit" : "3"
 } ]
\ No newline at end of file