Merge remote-tracking branch 'upstream/main' into joss_paper

Author: tsbinns

.github/workflows/unit_tests.yml

@@ -77,7 +77,7 @@ jobs:
         with:
           qt: true
           pyvista: false
-      - uses: mamba-org/setup-micromamba@v1
+      - uses: mamba-org/setup-micromamba@v2
         with:
           environment-file: environment.yml
           create-args: >- # beware the >- instead of |, we don't split on newlines but on spaces

.pre-commit-config.yaml

@@ -1,7 +1,7 @@
 repos:
   # ruff PyBispectra
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.4.7
+    rev: v0.7.3
     hooks:
       - id: ruff
         name: ruff lint pybispectra
@@ -10,7 +10,7 @@ repos:
 
   # ruff examples
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.4.7
+    rev: v0.7.3
     hooks:
       - id: ruff
         name: ruff lint examples
@@ -36,7 +36,7 @@ repos:
 
   # rstcheck
   - repo: https://github.com/rstcheck/rstcheck.git
-    rev: v6.2.0
+    rev: v6.2.4
     hooks:
       - id: rstcheck
         additional_dependencies:

examples/plot_compute_general.py

@@ -9,6 +9,8 @@
 # Author(s):
 #   Thomas S. Binns | github.com/tsbinns
 
+# sphinx_gallery_multi_image = "single"
+
 # %%
 
 import numpy as np

examples/plot_compute_tde.py

@@ -10,6 +10,8 @@
 # Author(s):
 #   Thomas S. Binns | github.com/tsbinns
 
+# sphinx_gallery_multi_image = "single"
+
 # %%
 
 import numpy as np

examples/plot_compute_tde_fbands.py

@@ -10,6 +10,8 @@
 # Author(s):
 #   Thomas S. Binns | github.com/tsbinns
 
+# sphinx_gallery_multi_image = "single"
+
 # %%
 
 import numpy as np

examples/plot_compute_waveshape.py

@@ -9,6 +9,8 @@
 # Author(s):
 #   Thomas S. Binns | github.com/tsbinns
 
+# sphinx_gallery_multi_image = "single"
+
 # %%
 
 import numpy as np

examples/plot_compute_waveshape_noisy_data.py

@@ -10,6 +10,8 @@
 # Author(s):
 #   Thomas S. Binns | github.com/tsbinns
 
+# sphinx_gallery_multi_image = "single"
+
 # %%
 
 import numpy as np

pyproject.toml

@@ -27,7 +27,7 @@ doc = [
   "pydata-sphinx-theme",
   "sphinx",
   "sphinx-copybutton",
-  "sphinx-gallery",
+  "sphinx-gallery>=0.18",
   "sphinxcontrib-bibtex",
 ]
 lint = [